RNA–Protein interactions for RNA: ENST00000595756.1

HOMER3-208, Transcript of homer scaffold protein 3, human

TSL 2

Gene HOMER3, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HOMER3-208	ENST00000595756	CASTOR1	Q8WTX7	329 aa		13.81	□□□□□ -0.2
HOMER3-208	ENST00000595756	MCUB	Q9NWR8	336 aa		13.81	□□□□□ -0.2
HOMER3-208	ENST00000595756	SMAD5-AS1	Q9Y6J3	95 aa		13.81	□□□□□ -0.2
HOMER3-208	ENST00000595756	DYNC2H1	Q8NCM8	4307 aa	Known RBP	13.81	□□□□□ -0.2
HOMER3-208	ENST00000595756	ARPC1B	O15143	372 aa	Known RBP	13.8	□□□□□ -0.2
HOMER3-208	ENST00000595756	SLC25A17	O43808	307 aa		13.8	□□□□□ -0.2
HOMER3-208	ENST00000595756	IGLV2-23	P01705	113 aa		13.8	□□□□□ -0.2
HOMER3-208	ENST00000595756	RLN1	P04808	185 aa		13.8	□□□□□ -0.2
HOMER3-208	ENST00000595756	F2R	P25116	425 aa		13.8	□□□□□ -0.2
HOMER3-208	ENST00000595756	TPPP2	P59282	170 aa		13.8	□□□□□ -0.2
HOMER3-208	ENST00000595756	OR2B11	Q5JQS5	317 aa		13.8	□□□□□ -0.2
HOMER3-208	ENST00000595756	ZNF57	Q68EA5	555 aa	Predicted RBP	13.8	□□□□□ -0.2
HOMER3-208	ENST00000595756	ACSM6	Q6P461	480 aa		13.8	□□□□□ -0.2
HOMER3-208	ENST00000595756	LFNG	Q8NES3	379 aa		13.8	□□□□□ -0.2
HOMER3-208	ENST00000595756	OR51S1	Q8NGJ8	323 aa		13.8	□□□□□ -0.2
HOMER3-208	ENST00000595756	CLCC1	Q96S66	551 aa		13.8	□□□□□ -0.2
HOMER3-208	ENST00000595756	PLEKHA2	Q9HB19	425 aa		13.8	□□□□□ -0.2
HOMER3-208	ENST00000595756	SLC2A9	Q9NRM0	540 aa		13.8	□□□□□ -0.2
HOMER3-208	ENST00000595756	C14orf166	Q9Y224	244 aa	Known RBP	13.8	□□□□□ -0.2
HOMER3-208	ENST00000595756		H3BUA1	57 aa		13.79	□□□□□ -0.2
HOMER3-208	ENST00000595756	B3GALNT1	O75752	331 aa		13.79	□□□□□ -0.2
HOMER3-208	ENST00000595756	HSPB1	P04792	205 aa	Known RBP	13.79	□□□□□ -0.2
HOMER3-208	ENST00000595756	CTSD	P07339	412 aa	Predicted RBP	13.79	□□□□□ -0.2
HOMER3-208	ENST00000595756	PPP5C	P53041	499 aa		13.79	□□□□□ -0.2
HOMER3-208	ENST00000595756	TAS2R31	P59538	309 aa		13.79	□□□□□ -0.2
HOMER3-208	ENST00000595756	PHLDA2	Q53GA4	152 aa		13.79	□□□□□ -0.2
HOMER3-208	ENST00000595756	FAAP20	Q6NZ36	180 aa		13.79	□□□□□ -0.2
HOMER3-208	ENST00000595756	IDO2	Q6ZQW0	420 aa		13.79	□□□□□ -0.2
HOMER3-208	ENST00000595756	HRASLS	Q9HDD0	168 aa		13.79	□□□□□ -0.2
HOMER3-208	ENST00000595756	COMMD9	Q9P000	198 aa		13.79	□□□□□ -0.2
HOMER3-208	ENST00000595756	COPZ2	Q9P299	210 aa		13.79	□□□□□ -0.2
HOMER3-208	ENST00000595756	NAP1L6	A6NFF2	107 aa		13.78	□□□□□ -0.2
HOMER3-208	ENST00000595756	SRRM4	A7MD48	611 aa	Known RBP	13.78	□□□□□ -0.2
HOMER3-208	ENST00000595756	CENPX	A8MT69	81 aa		13.78	□□□□□ -0.2
HOMER3-208	ENST00000595756	MPPED1	O15442	326 aa		13.78	□□□□□ -0.2
HOMER3-208	ENST00000595756	IGHV3-11	P01762	117 aa		13.78	□□□□□ -0.2
HOMER3-208	ENST00000595756	CRYGB	P07316	175 aa		13.78	□□□□□ -0.2
HOMER3-208	ENST00000595756	NQO2	P16083	231 aa		13.78	□□□□□ -0.2
HOMER3-208	ENST00000595756	PIGP	P57054	158 aa		13.78	□□□□□ -0.2
HOMER3-208	ENST00000595756	BRWD1-AS2	P59051	145 aa		13.78	□□□□□ -0.2
HOMER3-208	ENST00000595756	TBC1D26	Q86UD7	250 aa		13.78	□□□□□ -0.2
HOMER3-208	ENST00000595756	GRPEL2	Q8TAA5	225 aa		13.78	□□□□□ -0.2
HOMER3-208	ENST00000595756	MARCH1	Q8TCQ1	289 aa		13.78	□□□□□ -0.2
HOMER3-208	ENST00000595756	RHOV	Q96L33	236 aa		13.78	□□□□□ -0.2
HOMER3-208	ENST00000595756	GPHA2	Q96T91	129 aa		13.78	□□□□□ -0.2
HOMER3-208	ENST00000595756	CCDC32	Q9BV29	185 aa		13.78	□□□□□ -0.2
HOMER3-208	ENST00000595756	AKIP1	Q9NQ31	210 aa		13.78	□□□□□ -0.2
HOMER3-208	ENST00000595756	OR2A4	O95047	310 aa		13.77	□□□□□ -0.21
HOMER3-208	ENST00000595756	TRGV3	P03979	118 aa		13.77	□□□□□ -0.21
HOMER3-208	ENST00000595756	GP9	P14770	177 aa		13.77	□□□□□ -0.21
HOMER3-208	ENST00000595756	SPN	P16150	400 aa		13.77	□□□□□ -0.21
HOMER3-208	ENST00000595756	SSBP2	P81877	361 aa	Predicted RBP	13.77	□□□□□ -0.21
HOMER3-208	ENST00000595756	FXYD3	Q14802	87 aa		13.77	□□□□□ -0.21
HOMER3-208	ENST00000595756	BAK1	Q16611	211 aa		13.77	□□□□□ -0.21
HOMER3-208	ENST00000595756	MMD2	Q8IY49	270 aa		13.77	□□□□□ -0.21
HOMER3-208	ENST00000595756	OR13C8	Q8NGS7	320 aa		13.77	□□□□□ -0.21
HOMER3-208	ENST00000595756	OR4A5	Q8NH83	315 aa		13.77	□□□□□ -0.21
HOMER3-208	ENST00000595756	MS4A10	Q96PG2	267 aa		13.77	□□□□□ -0.21
HOMER3-208	ENST00000595756	OR2A7	Q96R45	310 aa		13.77	□□□□□ -0.21
HOMER3-208	ENST00000595756	ASCL2	Q99929	193 aa		13.77	□□□□□ -0.21
HOMER3-208	ENST00000595756	C7orf50	Q9BRJ6	194 aa	Known RBP	13.77	□□□□□ -0.21
HOMER3-208	ENST00000595756	GPR132	Q9UNW8	380 aa		13.77	□□□□□ -0.21
HOMER3-208	ENST00000595756	ACTL6B	O94805	426 aa		13.76	□□□□□ -0.21
HOMER3-208	ENST00000595756	CNIH1	O95406	144 aa		13.76	□□□□□ -0.21
HOMER3-208	ENST00000595756	SAA1	P0DJI8	122 aa	Predicted RBP	13.76	□□□□□ -0.21
HOMER3-208	ENST00000595756	RPA2	P15927	270 aa		13.76	□□□□□ -0.21
HOMER3-208	ENST00000595756	ERVK-16	P61578	105 aa		13.76	□□□□□ -0.21
HOMER3-208	ENST00000595756	POU2AF1	Q16633	256 aa		13.76	□□□□□ -0.21
HOMER3-208	ENST00000595756	CADM3	Q8N126	398 aa		13.76	□□□□□ -0.21
HOMER3-208	ENST00000595756	TMEM68	Q96MH6	324 aa		13.76	□□□□□ -0.21
HOMER3-208	ENST00000595756	SDHC	Q99643	169 aa	Predicted RBP	13.76	□□□□□ -0.21
HOMER3-208	ENST00000595756	SLC25A21	Q9BQT8	299 aa	Predicted RBP	13.76	□□□□□ -0.21
HOMER3-208	ENST00000595756	WDR12	Q9GZL7	423 aa	Known RBP	13.76	□□□□□ -0.21
HOMER3-208	ENST00000595756	ATG12	O94817	140 aa		13.75	□□□□□ -0.21
HOMER3-208	ENST00000595756	BRI3	O95415	125 aa		13.75	□□□□□ -0.21
HOMER3-208	ENST00000595756	SERPINE2	P07093	398 aa		13.75	□□□□□ -0.21
HOMER3-208	ENST00000595756	FGF2	P09038	288 aa		13.75	□□□□□ -0.21
HOMER3-208	ENST00000595756	IL7	P13232	177 aa		13.75	□□□□□ -0.21
HOMER3-208	ENST00000595756	MAS1L	P35410	378 aa		13.75	□□□□□ -0.21
HOMER3-208	ENST00000595756	LPAR6	P43657	344 aa		13.75	□□□□□ -0.21
HOMER3-208	ENST00000595756	PRSS8	Q16651	343 aa		13.75	□□□□□ -0.21
HOMER3-208	ENST00000595756	PUSL1	Q8N0Z8	303 aa	Known RBP	13.75	□□□□□ -0.21
HOMER3-208	ENST00000595756	DMBX1	Q8NFW5	382 aa		13.75	□□□□□ -0.21
HOMER3-208	ENST00000595756	BET1L	Q9NYM9	111 aa		13.75	□□□□□ -0.21
HOMER3-208	ENST00000595756		A0A0G2JLM5	398 aa		13.74	□□□□□ -0.21
HOMER3-208	ENST00000595756	C3orf85	A0A1B0GTC6	90 aa		13.74	□□□□□ -0.21
HOMER3-208	ENST00000595756	C13orf42	A0A1B0GVH6	325 aa		13.74	□□□□□ -0.21
HOMER3-208	ENST00000595756		H0Y980	276 aa		13.74	□□□□□ -0.21
HOMER3-208	ENST00000595756	KBTBD11	O94819	623 aa		13.74	□□□□□ -0.21
HOMER3-208	ENST00000595756	PI3	P19957	117 aa		13.74	□□□□□ -0.21
HOMER3-208	ENST00000595756	ZP3	P21754	424 aa		13.74	□□□□□ -0.21
HOMER3-208	ENST00000595756	ZNF846	Q147U1	533 aa		13.74	□□□□□ -0.21
HOMER3-208	ENST00000595756	TMEM167A	Q8TBQ9	72 aa		13.74	□□□□□ -0.21
HOMER3-208	ENST00000595756	MRGPRF	Q96AM1	343 aa		13.74	□□□□□ -0.21
HOMER3-208	ENST00000595756	OR4C12	Q96R67	309 aa		13.74	□□□□□ -0.21
HOMER3-208	ENST00000595756	RTBDN	Q9BSG5	229 aa	Predicted RBP	13.74	□□□□□ -0.21
HOMER3-208	ENST00000595756	ELOVL1	Q9BW60	279 aa		13.74	□□□□□ -0.21
HOMER3-208	ENST00000595756	RANGRF	Q9HD47	186 aa	Predicted RBP	13.74	□□□□□ -0.21
HOMER3-208	ENST00000595756	KCNIP3	Q9Y2W7	256 aa		13.74	□□□□□ -0.21
HOMER3-208	ENST00000595756	SACS	Q9NZJ4	4579 aa		13.74	□□□□□ -0.21

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