RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 SNAPC5O75971 98 aa20.06■□□□□ 0.8
TRIM28-204ENST00000594806 OR9G9P0C7N8 305 aa20.06■□□□□ 0.8
TRIM28-204ENST00000594806 G6PCP35575 357 aa20.06■□□□□ 0.8
TRIM28-204ENST00000594806 MYCNOSP40205 109 aa20.06■□□□□ 0.8
TRIM28-204ENST00000594806 RUNX1Q01196 453 aa20.06■□□□□ 0.8
TRIM28-204ENST00000594806 THOC7Q6I9Y2 204 aaKnown RBP20.06■□□□□ 0.8
TRIM28-204ENST00000594806 TTC9CQ8N5M4 171 aa20.06■□□□□ 0.8
TRIM28-204ENST00000594806 SLC25A21Q9BQT8 299 aaPredicted RBP20.06■□□□□ 0.8
TRIM28-204ENST00000594806 SRSF8Q9BRL6 282 aaKnown RBP20.06■□□□□ 0.8
TRIM28-204ENST00000594806 FKBP11Q9NYL4 201 aa20.06■□□□□ 0.8
TRIM28-204ENST00000594806 TEX13DA0A0J9YY54 714 aaPredicted RBP20.05■□□□□ 0.8
TRIM28-204ENST00000594806 NAP1L6A6NFF2 107 aa20.05■□□□□ 0.8
TRIM28-204ENST00000594806 UCP1P25874 307 aa20.05■□□□□ 0.8
TRIM28-204ENST00000594806 BAK1Q16611 211 aa20.05■□□□□ 0.8
TRIM28-204ENST00000594806 C8orf86Q6ZUL3 223 aa20.05■□□□□ 0.8
TRIM28-204ENST00000594806 SEC22AQ96IW7 307 aa20.05■□□□□ 0.8
TRIM28-204ENST00000594806 TP53RKQ96S44 253 aa20.05■□□□□ 0.8
TRIM28-204ENST00000594806 SDHCQ99643 169 aaPredicted RBP20.05■□□□□ 0.8
TRIM28-204ENST00000594806 NAA60Q9H7X0 242 aa20.05■□□□□ 0.8
TRIM28-204ENST00000594806 ZNF355PQ9NSJ1 428 aa20.05■□□□□ 0.8
TRIM28-204ENST00000594806 PTTG2Q9NZH5 202 aa20.05■□□□□ 0.8
TRIM28-204ENST00000594806 TRGV3P03979 118 aa20.04■□□□□ 0.8
TRIM28-204ENST00000594806 TPPP2P59282 170 aa20.04■□□□□ 0.8
TRIM28-204ENST00000594806 DHODHQ02127 395 aa20.04■□□□□ 0.8
TRIM28-204ENST00000594806 C10orf55Q5SWW7 151 aa20.04■□□□□ 0.8
TRIM28-204ENST00000594806 C18orf65Q6ZTR6 163 aa20.04■□□□□ 0.8
TRIM28-204ENST00000594806 H2BFWTQ7Z2G1 175 aa20.04■□□□□ 0.8
TRIM28-204ENST00000594806 ADAD2Q8NCV1 583 aaKnown RBP20.04■□□□□ 0.8
TRIM28-204ENST00000594806 WFDC9Q8NEX5 89 aa20.04■□□□□ 0.8
TRIM28-204ENST00000594806 S100ZQ8WXG8 99 aa20.04■□□□□ 0.8
TRIM28-204ENST00000594806 FYTTD1Q96QD9 318 aaKnown RBP20.04■□□□□ 0.8
TRIM28-204ENST00000594806 PRNDQ9UKY0 176 aa20.04■□□□□ 0.8
TRIM28-204ENST00000594806 PKD1L1Q8TDX9 2849 aa20.03■□□□□ 0.8
TRIM28-204ENST00000594806 TRAV3A0A0B4J244 114 aa20.03■□□□□ 0.8
TRIM28-204ENST00000594806 A0A0G2JLM5 398 aa20.03■□□□□ 0.8
TRIM28-204ENST00000594806 CRYM-AS1A6NIL9 109 aa20.03■□□□□ 0.8
TRIM28-204ENST00000594806 TEX22C9J3V5 150 aa20.03■□□□□ 0.8
TRIM28-204ENST00000594806 IGKV1-39P01597 117 aa20.03■□□□□ 0.8
TRIM28-204ENST00000594806 IGKV1D-39P04432 117 aa20.03■□□□□ 0.8
TRIM28-204ENST00000594806 HSD17B13Q7Z5P4 300 aaPredicted RBP20.03■□□□□ 0.8
TRIM28-204ENST00000594806 SGPP2Q8IWX5 399 aa20.03■□□□□ 0.8
TRIM28-204ENST00000594806 MS4A10Q96PG2 267 aa20.03■□□□□ 0.8
TRIM28-204ENST00000594806 C7orf50Q9BRJ6 194 aaKnown RBP20.03■□□□□ 0.8
TRIM28-204ENST00000594806 AKIP1Q9NQ31 210 aa20.03■□□□□ 0.8
TRIM28-204ENST00000594806 COA4Q9NYJ1 87 aa20.03■□□□□ 0.8
TRIM28-204ENST00000594806 ZNF257Q9Y2Q1 563 aa20.03■□□□□ 0.8
TRIM28-204ENST00000594806 KCNIP3Q9Y2W7 256 aa20.03■□□□□ 0.8
TRIM28-204ENST00000594806 VWFP04275 2813 aa20.03■□□□□ 0.8
TRIM28-204ENST00000594806 NPIPB5A8MRT5 1133 aa20.02■□□□□ 0.8
TRIM28-204ENST00000594806 CCL24O00175 119 aa20.02■□□□□ 0.8
TRIM28-204ENST00000594806 OR2B8PP59922 312 aa20.02■□□□□ 0.8
TRIM28-204ENST00000594806 TRIM16LQ309B1 348 aa20.02■□□□□ 0.8
TRIM28-204ENST00000594806 OR1L8Q8NGR8 309 aa20.02■□□□□ 0.8
TRIM28-204ENST00000594806 USMG5Q96IX5 58 aa20.02■□□□□ 0.8
TRIM28-204ENST00000594806 P2RX4Q99571 388 aa20.02■□□□□ 0.8
TRIM28-204ENST00000594806 TMEM222Q9H0R3 208 aa20.02■□□□□ 0.8
TRIM28-204ENST00000594806 CENPXA8MT69 81 aa20.01■□□□□ 0.79
TRIM28-204ENST00000594806 E7EUB6 86 aa20.01■□□□□ 0.79
TRIM28-204ENST00000594806 I3L521 148 aa20.01■□□□□ 0.79
TRIM28-204ENST00000594806 DHFRP00374 187 aa20.01■□□□□ 0.79
TRIM28-204ENST00000594806 ETV3LQ6ZN32 361 aa20.01■□□□□ 0.79
TRIM28-204ENST00000594806 OR5B3Q8NH48 314 aa20.01■□□□□ 0.79
TRIM28-204ENST00000594806 GALNT14Q96FL9 552 aa20.01■□□□□ 0.79
TRIM28-204ENST00000594806 QTRT1Q9BXR0 403 aaKnown RBP20.01■□□□□ 0.79
TRIM28-204ENST00000594806 GNB4Q9HAV0 340 aa20.01■□□□□ 0.79
TRIM28-204ENST00000594806 CDS2O95674 445 aa20■□□□□ 0.79
TRIM28-204ENST00000594806 CRYGCP07315 174 aa20■□□□□ 0.79
TRIM28-204ENST00000594806 OR5AC1P0C628 307 aa20■□□□□ 0.79
TRIM28-204ENST00000594806 APELAP0DMC3 54 aa20■□□□□ 0.79
TRIM28-204ENST00000594806 IL7P13232 177 aa20■□□□□ 0.79
TRIM28-204ENST00000594806 CD33P20138 364 aa20■□□□□ 0.79
TRIM28-204ENST00000594806 SP6Q3SY56 376 aa20■□□□□ 0.79
TRIM28-204ENST00000594806 CASTOR1Q8WTX7 329 aa20■□□□□ 0.79
TRIM28-204ENST00000594806 GLYATL2Q8WU03 294 aa20■□□□□ 0.79
TRIM28-204ENST00000594806 RAX2Q96IS3 184 aa20■□□□□ 0.79
TRIM28-204ENST00000594806 CCDC32Q9BV29 185 aa20■□□□□ 0.79
TRIM28-204ENST00000594806 TMEM14BQ9NUH8 114 aa20■□□□□ 0.79
TRIM28-204ENST00000594806 PIGBOS1A0A0B4J2F0 54 aa19.99■□□□□ 0.79
TRIM28-204ENST00000594806 TEX50A0A1B0GTY4 177 aa19.99■□□□□ 0.79
TRIM28-204ENST00000594806 C13orf42A0A1B0GVH6 325 aa19.99■□□□□ 0.79
TRIM28-204ENST00000594806 A0A1B0GW64 132 aa19.99■□□□□ 0.79
TRIM28-204ENST00000594806 HMX3A6NHT5 357 aa19.99■□□□□ 0.79
TRIM28-204ENST00000594806 C15orf61A6NNL5 157 aa19.99■□□□□ 0.79
TRIM28-204ENST00000594806 LGALS1P09382 135 aaKnown RBP19.99■□□□□ 0.79
TRIM28-204ENST00000594806 TRAPPC2P0DI81 140 aa19.99■□□□□ 0.79
TRIM28-204ENST00000594806 TRAPPC2BP0DI82 140 aa19.99■□□□□ 0.79
TRIM28-204ENST00000594806 AKR1C2P52895 323 aa19.99■□□□□ 0.79
TRIM28-204ENST00000594806 LINC00482Q8N8I6 264 aa19.99■□□□□ 0.79
TRIM28-204ENST00000594806 OR4A16Q8NH70 328 aa19.99■□□□□ 0.79
TRIM28-204ENST00000594806 OR51B2Q9Y5P1 312 aa19.99■□□□□ 0.79
TRIM28-204ENST00000594806 TRBV9A0A0B4J1U6 114 aa19.98■□□□□ 0.79
TRIM28-204ENST00000594806 CGB1A6NKQ9 187 aa19.98■□□□□ 0.79
TRIM28-204ENST00000594806 FAM223BA6NKX1 122 aa19.98■□□□□ 0.79
TRIM28-204ENST00000594806 PSMB6P28072 239 aa19.98■□□□□ 0.79
TRIM28-204ENST00000594806 RBMS2Q15434 407 aaKnown RBP19.98■□□□□ 0.79
TRIM28-204ENST00000594806 FAM219AQ8IW50 185 aa19.98■□□□□ 0.79
TRIM28-204ENST00000594806 FAM223AQ8IWN6 122 aa19.98■□□□□ 0.79
TRIM28-204ENST00000594806 MRPL41Q8IXM3 137 aaKnown RBP19.98■□□□□ 0.79
TRIM28-204ENST00000594806 OR11H1Q8NG94 326 aa19.98■□□□□ 0.79
TRIM28-204ENST00000594806 RRNAD1Q96FB5 475 aaKnown RBP19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms