RNA–Protein interactions for RNA: ENST00000594724.5

USE1-205, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-205ENST00000594724 FAM223AQ8IWN6 122 aa11.3□□□□□ -0.6
USE1-205ENST00000594724 FCAMRQ8WWV6 532 aa11.3□□□□□ -0.6
USE1-205ENST00000594724 DGCR14Q96DF8 476 aaKnown RBP11.3□□□□□ -0.6
USE1-205ENST00000594724 ELOVL1Q9BW60 279 aa11.3□□□□□ -0.6
USE1-205ENST00000594724 ZNF257Q9Y2Q1 563 aa11.3□□□□□ -0.6
USE1-205ENST00000594724 PSMB6P28072 239 aa11.29□□□□□ -0.6
USE1-205ENST00000594724 OR2B8PP59922 312 aa11.29□□□□□ -0.6
USE1-205ENST00000594724 LPCAT3Q6P1A2 487 aa11.29□□□□□ -0.6
USE1-205ENST00000594724 LAX1Q8IWV1 398 aa11.29□□□□□ -0.6
USE1-205ENST00000594724 NECAP1Q8NC96 275 aa11.29□□□□□ -0.6
USE1-205ENST00000594724 RAB2BQ8WUD1 216 aa11.29□□□□□ -0.6
USE1-205ENST00000594724 FANCD2OSQ96PS1 177 aa11.29□□□□□ -0.6
USE1-205ENST00000594724 B9D2Q9BPU9 175 aa11.29□□□□□ -0.6
USE1-205ENST00000594724 RSRP1Q9BUV0 290 aa11.29□□□□□ -0.6
USE1-205ENST00000594724 COMMD9Q9P000 198 aa11.29□□□□□ -0.6
USE1-205ENST00000594724 MTFP1Q9UDX5 166 aa11.29□□□□□ -0.6
USE1-205ENST00000594724 FBXL7Q9UJT9 491 aa11.29□□□□□ -0.6
USE1-205ENST00000594724 NDUFB8O95169 186 aa11.28□□□□□ -0.6
USE1-205ENST00000594724 KRASP01116 189 aa11.28□□□□□ -0.6
USE1-205ENST00000594724 IGHV3-23P01764 117 aa11.28□□□□□ -0.6
USE1-205ENST00000594724 CD3DP04234 171 aa11.28□□□□□ -0.6
USE1-205ENST00000594724 IFNA6P05013 189 aa11.28□□□□□ -0.6
USE1-205ENST00000594724 CRYGCP07315 174 aa11.28□□□□□ -0.6
USE1-205ENST00000594724 CTRB1P17538 263 aa11.28□□□□□ -0.6
USE1-205ENST00000594724 G6PCP35575 357 aa11.28□□□□□ -0.6
USE1-205ENST00000594724 RPL5P46777 297 aaKnown RBP11.28□□□□□ -0.6
USE1-205ENST00000594724 TMBIM6P55061 237 aa11.28□□□□□ -0.6
USE1-205ENST00000594724 ERVK-16P61578 105 aa11.28□□□□□ -0.6
USE1-205ENST00000594724 RPEL1Q2QD12 228 aa11.28□□□□□ -0.6
USE1-205ENST00000594724 C15orf32Q32M92 178 aa11.28□□□□□ -0.6
USE1-205ENST00000594724 VAX1Q5SQQ9 334 aa11.28□□□□□ -0.6
USE1-205ENST00000594724 CTRB2Q6GPI1 263 aa11.28□□□□□ -0.6
USE1-205ENST00000594724 OR6Q1Q8NGQ2 317 aa11.28□□□□□ -0.6
USE1-205ENST00000594724 DYNC2LI1Q8TCX1 351 aa11.28□□□□□ -0.6
USE1-205ENST00000594724 COMMD5Q9GZQ3 224 aa11.28□□□□□ -0.6
USE1-205ENST00000594724 S4R3C0 116 aa11.28□□□□□ -0.6
USE1-205ENST00000594724 DNAH9Q9NYC9 4486 aa11.28□□□□□ -0.6
USE1-205ENST00000594724 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.27□□□□□ -0.61
USE1-205ENST00000594724 MARCH11A6NNE9 402 aa11.27□□□□□ -0.61
USE1-205ENST00000594724 BMPR1BO00238 502 aa11.27□□□□□ -0.61
USE1-205ENST00000594724 UCP3P55916 312 aa11.27□□□□□ -0.61
USE1-205ENST00000594724 DCTN2Q13561 401 aaKnown RBP11.27□□□□□ -0.61
USE1-205ENST00000594724 RNASE10Q5GAN6 216 aaKnown RBP11.27□□□□□ -0.61
USE1-205ENST00000594724 C11orf87Q6NUJ2 197 aa11.27□□□□□ -0.61
USE1-205ENST00000594724 IL34Q6ZMJ4 242 aa11.27□□□□□ -0.61
USE1-205ENST00000594724 TBC1D26Q86UD7 250 aa11.27□□□□□ -0.61
USE1-205ENST00000594724 OR10W1Q8NGF6 305 aa11.27□□□□□ -0.61
USE1-205ENST00000594724 OR4D10Q8NGI6 311 aa11.27□□□□□ -0.61
USE1-205ENST00000594724 OR9G4Q8NGQ1 327 aa11.27□□□□□ -0.61
USE1-205ENST00000594724 NSG2Q9Y328 171 aa11.27□□□□□ -0.61
USE1-205ENST00000594724 TEX50A0A1B0GTY4 177 aa11.26□□□□□ -0.61
USE1-205ENST00000594724 IGLC7A0M8Q6 106 aa11.26□□□□□ -0.61
USE1-205ENST00000594724 PPP5D1E7EU14 171 aa11.26□□□□□ -0.61
USE1-205ENST00000594724 TPPPO94811 219 aa11.26□□□□□ -0.61
USE1-205ENST00000594724 DEFA4P12838 97 aa11.26□□□□□ -0.61
USE1-205ENST00000594724 GP9P14770 177 aa11.26□□□□□ -0.61
USE1-205ENST00000594724 PI3P19957 117 aa11.26□□□□□ -0.61
USE1-205ENST00000594724 S100GP29377 79 aa11.26□□□□□ -0.61
USE1-205ENST00000594724 TATDN3Q17R31 274 aa11.26□□□□□ -0.61
USE1-205ENST00000594724 SLC38A6Q8IZM9 456 aa11.26□□□□□ -0.61
USE1-205ENST00000594724 C15orf40Q8WUR7 153 aa11.26□□□□□ -0.61
USE1-205ENST00000594724 QTRT1Q9BXR0 403 aaKnown RBP11.26□□□□□ -0.61
USE1-205ENST00000594724 DMRT1Q9Y5R6 373 aa11.26□□□□□ -0.61
USE1-205ENST00000594724 H3BMQ9 156 aa11.25□□□□□ -0.61
USE1-205ENST00000594724 DHFRP00374 187 aa11.25□□□□□ -0.61
USE1-205ENST00000594724 IGLV1-51P01701 117 aa11.25□□□□□ -0.61
USE1-205ENST00000594724 HLA-AP01891 365 aaKnown RBP11.25□□□□□ -0.61
USE1-205ENST00000594724 CSN3P07498 182 aa11.25□□□□□ -0.61
USE1-205ENST00000594724 TRAPPC2P0DI81 140 aa11.25□□□□□ -0.61
USE1-205ENST00000594724 TRAPPC2BP0DI82 140 aa11.25□□□□□ -0.61
USE1-205ENST00000594724 PGAM2P15259 253 aa11.25□□□□□ -0.61
USE1-205ENST00000594724 CLEC19AQ6UXS0 136 aa11.25□□□□□ -0.61
USE1-205ENST00000594724 LHFPL1Q86WI0 220 aa11.25□□□□□ -0.61
USE1-205ENST00000594724 TMEM229BQ8NBD8 167 aa11.25□□□□□ -0.61
USE1-205ENST00000594724 DIRAS2Q96HU8 199 aa11.25□□□□□ -0.61
USE1-205ENST00000594724 BCL7BQ9BQE9 202 aa11.25□□□□□ -0.61
USE1-205ENST00000594724 HINT2Q9BX68 163 aa11.25□□□□□ -0.61
USE1-205ENST00000594724 CCDC59Q9P031 241 aaKnown RBP11.25□□□□□ -0.61
USE1-205ENST00000594724 IGLV11-55A0A075B6I3 123 aa11.24□□□□□ -0.61
USE1-205ENST00000594724 GABARAPH6UMI1 98 aa11.24□□□□□ -0.61
USE1-205ENST00000594724 NOL3O60936 208 aaKnown RBP11.24□□□□□ -0.61
USE1-205ENST00000594724 SNAPC5O75971 98 aa11.24□□□□□ -0.61
USE1-205ENST00000594724 OR2C1O95371 312 aa11.24□□□□□ -0.61
USE1-205ENST00000594724 RAB3DO95716 219 aa11.24□□□□□ -0.61
USE1-205ENST00000594724 IGKV1-39P01597 117 aa11.24□□□□□ -0.61
USE1-205ENST00000594724 IGKV1D-39P04432 117 aa11.24□□□□□ -0.61
USE1-205ENST00000594724 HIST1H1BP16401 226 aaKnown RBP11.24□□□□□ -0.61
USE1-205ENST00000594724 KLK9Q2XQG4 91 aa11.24□□□□□ -0.61
USE1-205ENST00000594724 ARRDC1Q8N5I2 433 aa11.24□□□□□ -0.61
USE1-205ENST00000594724 OR1L8Q8NGR8 309 aa11.24□□□□□ -0.61
USE1-205ENST00000594724 ISOC1Q96CN7 298 aa11.24□□□□□ -0.61
USE1-205ENST00000594724 CCDC140Q96MF4 163 aa11.24□□□□□ -0.61
USE1-205ENST00000594724 ASCL2Q99929 193 aa11.24□□□□□ -0.61
USE1-205ENST00000594724 C6orf62Q9GZU0 229 aaPredicted RBP11.24□□□□□ -0.61
USE1-205ENST00000594724 KLK9Q9UKQ9 250 aa11.24□□□□□ -0.61
USE1-205ENST00000594724 OR51B2Q9Y5P1 312 aa11.24□□□□□ -0.61
USE1-205ENST00000594724 SMAD5-AS1Q9Y6J3 95 aa11.24□□□□□ -0.61
USE1-205ENST00000594724 MFSD2BA6NFX1 497 aa11.23□□□□□ -0.61
USE1-205ENST00000594724 DBX1A6NMT0 343 aa11.23□□□□□ -0.61
USE1-205ENST00000594724 CD74P04233 296 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms