RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 UPK2O00526 184 aa12.21□□□□□ -0.46
VRK3-207ENST00000594092 LY86O95711 162 aa12.21□□□□□ -0.46
VRK3-207ENST00000594092 IGHV4-31P0DP07 118 aa12.21□□□□□ -0.46
VRK3-207ENST00000594092 CD1BP29016 333 aa12.21□□□□□ -0.46
VRK3-207ENST00000594092 SPCS3P61009 180 aa12.21□□□□□ -0.46
VRK3-207ENST00000594092 TMEM267Q0VDI3 215 aaPredicted RBP12.21□□□□□ -0.46
VRK3-207ENST00000594092 ZNF266Q14584 549 aa12.21□□□□□ -0.46
VRK3-207ENST00000594092 TMEM249Q2WGJ8 235 aa12.21□□□□□ -0.46
VRK3-207ENST00000594092 SPANXN5Q5MJ07 72 aa12.21□□□□□ -0.46
VRK3-207ENST00000594092 CCDC144NLQ6NUI1 221 aa12.21□□□□□ -0.46
VRK3-207ENST00000594092 WFDC11Q8NEX6 87 aa12.21□□□□□ -0.46
VRK3-207ENST00000594092 OR5C1Q8NGR4 320 aa12.21□□□□□ -0.46
VRK3-207ENST00000594092 PCNPQ8WW12 178 aaKnown RBP12.21□□□□□ -0.46
VRK3-207ENST00000594092 MALSU1Q96EH3 234 aa12.21□□□□□ -0.46
VRK3-207ENST00000594092 WFDC1Q9HC57 220 aa12.21□□□□□ -0.46
VRK3-207ENST00000594092 NUP50Q9UKX7 468 aa12.21□□□□□ -0.46
VRK3-207ENST00000594092 CREBBPQ92793 2442 aa12.2□□□□□ -0.46
VRK3-207ENST00000594092 IGHV3OR16-10A0A075B7F0 116 aa12.2□□□□□ -0.46
VRK3-207ENST00000594092 IGHV1-69DA0A0B4J2H0 117 aa12.2□□□□□ -0.46
VRK3-207ENST00000594092 VENTXO95231 258 aa12.2□□□□□ -0.46
VRK3-207ENST00000594092 IGHV1-69P01742 117 aa12.2□□□□□ -0.46
VRK3-207ENST00000594092 LGALS7P47929 136 aa12.2□□□□□ -0.46
VRK3-207ENST00000594092 DYNLT3P51808 116 aa12.2□□□□□ -0.46
VRK3-207ENST00000594092 CLINT1Q14677 625 aa12.2□□□□□ -0.46
VRK3-207ENST00000594092 FAM74A1Q5RGS3 127 aa12.2□□□□□ -0.46
VRK3-207ENST00000594092 TMEM217Q8N7C4 229 aa12.2□□□□□ -0.46
VRK3-207ENST00000594092 OR1S2Q8NGQ3 325 aa12.2□□□□□ -0.46
VRK3-207ENST00000594092 ZDHHC16Q969W1 377 aa12.2□□□□□ -0.46
VRK3-207ENST00000594092 CLCC1Q96S66 551 aa12.2□□□□□ -0.46
VRK3-207ENST00000594092 FOXC2Q99958 501 aa12.2□□□□□ -0.46
VRK3-207ENST00000594092 TMEM14BQ9NUH8 114 aa12.2□□□□□ -0.46
VRK3-207ENST00000594092 FOXA2Q9Y261 457 aaPredicted RBP12.2□□□□□ -0.46
VRK3-207ENST00000594092 TRAV40A0A0B4J280 105 aa12.19□□□□□ -0.46
VRK3-207ENST00000594092 KBTBD11O94819 623 aa12.19□□□□□ -0.46
VRK3-207ENST00000594092 TGFAP01135 160 aa12.19□□□□□ -0.46
VRK3-207ENST00000594092 AVPP01185 164 aa12.19□□□□□ -0.46
VRK3-207ENST00000594092 PDLIM3Q53GG5 364 aaPredicted RBP12.19□□□□□ -0.46
VRK3-207ENST00000594092 TMED6Q8WW62 240 aa12.19□□□□□ -0.46
VRK3-207ENST00000594092 PRNDQ9UKY0 176 aa12.19□□□□□ -0.46
VRK3-207ENST00000594092 LINC00862A6NCI5 91 aa12.18□□□□□ -0.46
VRK3-207ENST00000594092 NMBP08949 121 aa12.18□□□□□ -0.46
VRK3-207ENST00000594092 METTL15P1P0C7V9 234 aa12.18□□□□□ -0.46
VRK3-207ENST00000594092 IGHV4-38-2P0DP08 117 aa12.18□□□□□ -0.46
VRK3-207ENST00000594092 CNTFRP26992 372 aa12.18□□□□□ -0.46
VRK3-207ENST00000594092 HBG1P69891 147 aa12.18□□□□□ -0.46
VRK3-207ENST00000594092 HBG2P69892 147 aa12.18□□□□□ -0.46
VRK3-207ENST00000594092 VMA21Q3ZAQ7 101 aa12.18□□□□□ -0.46
VRK3-207ENST00000594092 SPINK9Q5DT21 86 aa12.18□□□□□ -0.46
VRK3-207ENST00000594092 RUSC1-AS1Q66K80 236 aa12.18□□□□□ -0.46
VRK3-207ENST00000594092 VSTM2AQ8TAG5 236 aa12.18□□□□□ -0.46
VRK3-207ENST00000594092 LRRC20Q8TCA0 184 aa12.18□□□□□ -0.46
VRK3-207ENST00000594092 RNF5Q99942 180 aa12.18□□□□□ -0.46
VRK3-207ENST00000594092 ARV1Q9H2C2 271 aa12.18□□□□□ -0.46
VRK3-207ENST00000594092 STRAPQ9Y3F4 350 aaKnown RBP12.18□□□□□ -0.46
VRK3-207ENST00000594092 ZANQ9Y493 2812 aa12.18□□□□□ -0.46
VRK3-207ENST00000594092 TNCP24821 2201 aa12.18□□□□□ -0.46
VRK3-207ENST00000594092 SLC25A17O43808 307 aa12.18□□□□□ -0.46
VRK3-207ENST00000594092 DFFBO76075 338 aa12.18□□□□□ -0.46
VRK3-207ENST00000594092 CD24P25063 80 aa12.18□□□□□ -0.46
VRK3-207ENST00000594092 TMEM14EPQ6UXP3 125 aa12.18□□□□□ -0.46
VRK3-207ENST00000594092 OR4A5Q8NH83 315 aa12.18□□□□□ -0.46
VRK3-207ENST00000594092 TMEM167AQ8TBQ9 72 aa12.18□□□□□ -0.46
VRK3-207ENST00000594092 TSNAXQ99598 290 aaKnown RBP12.18□□□□□ -0.46
VRK3-207ENST00000594092 ATP5SQ99766 215 aa12.18□□□□□ -0.46
VRK3-207ENST00000594092 GINS3Q9BRX5 216 aa12.18□□□□□ -0.46
VRK3-207ENST00000594092 HIPK2Q9H2X6 1198 aa12.18□□□□□ -0.46
VRK3-207ENST00000594092 TCF19Q9Y242 345 aa12.18□□□□□ -0.46
VRK3-207ENST00000594092 TET2Q6N021 2002 aaPredicted RBP12.18□□□□□ -0.46
VRK3-207ENST00000594092 J3QLI3 93 aa12.17□□□□□ -0.46
VRK3-207ENST00000594092 IGKV1D-33P01593 117 aa12.17□□□□□ -0.46
VRK3-207ENST00000594092 IGKV1-33P01594 117 aa12.17□□□□□ -0.46
VRK3-207ENST00000594092 SNRNP70P08621 437 aaKnown RBP12.17□□□□□ -0.46
VRK3-207ENST00000594092 FGF2P09038 288 aa12.17□□□□□ -0.46
VRK3-207ENST00000594092 MYOD1P15172 320 aa12.17□□□□□ -0.46
VRK3-207ENST00000594092 RPP30P78346 268 aaKnown RBP12.17□□□□□ -0.46
VRK3-207ENST00000594092 PSG5Q15238 335 aa12.17□□□□□ -0.46
VRK3-207ENST00000594092 BRD3OSQ6XYD6 125 aa12.17□□□□□ -0.46
VRK3-207ENST00000594092 STPG2Q8N412 459 aa12.17□□□□□ -0.46
VRK3-207ENST00000594092 TEX45Q8NA69 505 aa12.17□□□□□ -0.46
VRK3-207ENST00000594092 RNF141Q8WVD5 230 aa12.17□□□□□ -0.46
VRK3-207ENST00000594092 TPSG1Q9NRR2 321 aa12.17□□□□□ -0.46
VRK3-207ENST00000594092 FKBP11Q9NYL4 201 aa12.17□□□□□ -0.46
VRK3-207ENST00000594092 OR51B2Q9Y5P1 312 aa12.17□□□□□ -0.46
VRK3-207ENST00000594092 ITPR3Q14573 2671 aa12.17□□□□□ -0.46
VRK3-207ENST00000594092 CELSR1Q9NYQ6 3014 aa12.16□□□□□ -0.46
VRK3-207ENST00000594092 FBXO24O75426 580 aa12.16□□□□□ -0.46
VRK3-207ENST00000594092 MOSP00540 346 aa12.16□□□□□ -0.46
VRK3-207ENST00000594092 CRYGBP07316 175 aa12.16□□□□□ -0.46
VRK3-207ENST00000594092 HOXA1P49639 335 aaPredicted RBP12.16□□□□□ -0.46
VRK3-207ENST00000594092 HSPE1P61604 102 aaKnown RBP12.16□□□□□ -0.46
VRK3-207ENST00000594092 HNF4GQ14541 408 aa12.16□□□□□ -0.46
VRK3-207ENST00000594092 MRGPRG-AS1Q2M3A8 158 aa12.16□□□□□ -0.46
VRK3-207ENST00000594092 FBLN7Q53RD9 439 aa12.16□□□□□ -0.46
VRK3-207ENST00000594092 KLF17Q5JT82 389 aaPredicted RBP12.16□□□□□ -0.46
VRK3-207ENST00000594092 EAF1Q96JC9 268 aaPredicted RBP12.16□□□□□ -0.46
VRK3-207ENST00000594092 OR4C12Q96R67 309 aa12.16□□□□□ -0.46
VRK3-207ENST00000594092 ZNF430Q9H8G1 570 aaPredicted RBP12.16□□□□□ -0.46
VRK3-207ENST00000594092 ZNF257Q9Y2Q1 563 aa12.16□□□□□ -0.46
VRK3-207ENST00000594092 SCAF4O95104 1147 aaKnown RBP12.16□□□□□ -0.46
VRK3-207ENST00000594092 RPL8P62917 257 aaKnown RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms