RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 KPTNQ9Y664 436 aa10.73□□□□□ -0.69
VRK3-205ENST00000593919 WSB1Q9Y6I7 421 aa10.73□□□□□ -0.69
VRK3-205ENST00000593919 TNCP24821 2201 aa10.73□□□□□ -0.69
VRK3-205ENST00000593919 ZFHX3Q15911 3703 aa10.73□□□□□ -0.69
VRK3-205ENST00000593919 SNAPINO95295 136 aa10.72□□□□□ -0.69
VRK3-205ENST00000593919 METTL15P1P0C7V9 234 aa10.72□□□□□ -0.69
VRK3-205ENST00000593919 CT45A6P0DMU7 189 aa10.72□□□□□ -0.69
VRK3-205ENST00000593919 CT45A5P0DMU8 189 aa10.72□□□□□ -0.69
VRK3-205ENST00000593919 CT45A7P0DMV0 189 aa10.72□□□□□ -0.69
VRK3-205ENST00000593919 PRTN3P24158 256 aa10.72□□□□□ -0.69
VRK3-205ENST00000593919 KLRD1Q13241 179 aa10.72□□□□□ -0.69
VRK3-205ENST00000593919 SLC25A24Q6NUK1 477 aa10.72□□□□□ -0.69
VRK3-205ENST00000593919 COMMD1Q8N668 190 aa10.72□□□□□ -0.69
VRK3-205ENST00000593919 BEND2Q8NDZ0 799 aa10.72□□□□□ -0.69
VRK3-205ENST00000593919 TMEM186Q96B77 213 aa10.72□□□□□ -0.69
VRK3-205ENST00000593919 RBMXL1Q96E39 390 aaKnown RBP10.72□□□□□ -0.69
VRK3-205ENST00000593919 ADTRPQ96IZ2 230 aa10.72□□□□□ -0.69
VRK3-205ENST00000593919 MRPL20Q9BYC9 149 aaKnown RBP10.72□□□□□ -0.69
VRK3-205ENST00000593919 POLR3KQ9Y2Y1 108 aaPredicted RBP10.72□□□□□ -0.69
VRK3-205ENST00000593919 MMP24Q9Y5R2 645 aa10.72□□□□□ -0.69
VRK3-205ENST00000593919 PDZD2O15018 2839 aa10.72□□□□□ -0.69
VRK3-205ENST00000593919 RBFOX2O43251 390 aaKnown RBP eCLIP10.72□□□□□ -0.69
VRK3-205ENST00000593919 KIR2DS2P43631 304 aa10.72□□□□□ -0.69
VRK3-205ENST00000593919 PRRX1P54821 245 aa10.72□□□□□ -0.69
VRK3-205ENST00000593919 FAM71F2Q6NXP2 309 aa10.72□□□□□ -0.69
VRK3-205ENST00000593919 VMO1Q7Z5L0 202 aa10.72□□□□□ -0.69
VRK3-205ENST00000593919 CBLN2Q8IUK8 224 aa10.72□□□□□ -0.69
VRK3-205ENST00000593919 OR4P4Q8NGL7 312 aa10.72□□□□□ -0.69
VRK3-205ENST00000593919 OR13D1Q8NGV5 346 aa10.72□□□□□ -0.69
VRK3-205ENST00000593919 GNPNAT1Q96EK6 184 aaPredicted RBP10.72□□□□□ -0.69
VRK3-205ENST00000593919 SIRPDQ9H106 197 aa10.72□□□□□ -0.69
VRK3-205ENST00000593919 UNKLQ9H9P5 680 aaKnown RBP10.72□□□□□ -0.69
VRK3-205ENST00000593919 CR1P17927 2039 aa10.71□□□□□ -0.69
VRK3-205ENST00000593919 DFFBO76075 338 aa10.71□□□□□ -0.69
VRK3-205ENST00000593919 IFNA5P01569 189 aa10.71□□□□□ -0.69
VRK3-205ENST00000593919 SLC25A16P16260 332 aa10.71□□□□□ -0.69
VRK3-205ENST00000593919 PEA15Q15121 130 aa10.71□□□□□ -0.69
VRK3-205ENST00000593919 SPANXN5Q5MJ07 72 aa10.71□□□□□ -0.69
VRK3-205ENST00000593919 HCP5Q6MZN7 132 aa10.71□□□□□ -0.69
VRK3-205ENST00000593919 OR4S2Q8NH73 311 aa10.71□□□□□ -0.69
VRK3-205ENST00000593919 RBKSQ9H477 322 aa10.71□□□□□ -0.69
VRK3-205ENST00000593919 FBXO7Q9Y3I1 522 aa10.71□□□□□ -0.69
VRK3-205ENST00000593919 TET2Q6N021 2002 aaPredicted RBP10.71□□□□□ -0.7
VRK3-205ENST00000593919 MARCH11A6NNE9 402 aa10.7□□□□□ -0.7
VRK3-205ENST00000593919 UMAD1C9J7I0 102 aa10.7□□□□□ -0.7
VRK3-205ENST00000593919 BUB1B-PAK6H3BSN5 160 aa10.7□□□□□ -0.7
VRK3-205ENST00000593919 HPRT1P00492 218 aa10.7□□□□□ -0.7
VRK3-205ENST00000593919 IL3RAP26951 378 aa10.7□□□□□ -0.7
VRK3-205ENST00000593919 UBE2KP61086 200 aa10.7□□□□□ -0.7
VRK3-205ENST00000593919 ARL16Q0P5N6 197 aa10.7□□□□□ -0.7
VRK3-205ENST00000593919 AKIRIN2Q53H80 203 aa10.7□□□□□ -0.7
VRK3-205ENST00000593919 AKR1C8PQ5T2L2 129 aa10.7□□□□□ -0.7
VRK3-205ENST00000593919 LRRC75A-AS1Q8N1F1 130 aa10.7□□□□□ -0.7
VRK3-205ENST00000593919 OR11H6Q8NGC7 330 aa10.7□□□□□ -0.7
VRK3-205ENST00000593919 IGKV1-16P04430 117 aa10.7□□□□□ -0.7
VRK3-205ENST00000593919 ARG1P05089 322 aa10.7□□□□□ -0.7
VRK3-205ENST00000593919 P0C879 139 aa10.7□□□□□ -0.7
VRK3-205ENST00000593919 HOXB4P17483 251 aaPredicted RBP10.7□□□□□ -0.7
VRK3-205ENST00000593919 USF1P22415 310 aaPredicted RBP10.7□□□□□ -0.7
VRK3-205ENST00000593919 TAS2R30P59541 319 aa10.7□□□□□ -0.7
VRK3-205ENST00000593919 TNFRSF9Q07011 255 aa10.7□□□□□ -0.7
VRK3-205ENST00000593919 HAPLN4Q86UW8 402 aa10.7□□□□□ -0.7
VRK3-205ENST00000593919 TGIF2LXQ8IUE1 241 aa10.7□□□□□ -0.7
VRK3-205ENST00000593919 R3HDM4Q96D70 268 aa10.7□□□□□ -0.7
VRK3-205ENST00000593919 NABP2Q9BQ15 211 aa10.7□□□□□ -0.7
VRK3-205ENST00000593919 PCGF1Q9BSM1 259 aa10.7□□□□□ -0.7
VRK3-205ENST00000593919 SCRT1Q9BWW7 348 aa10.7□□□□□ -0.7
VRK3-205ENST00000593919 SLC35D1Q9NTN3 355 aa10.7□□□□□ -0.7
VRK3-205ENST00000593919 ITPR3Q14573 2671 aa10.7□□□□□ -0.7
VRK3-205ENST00000593919 PRRC2AP48634 2157 aaKnown RBP10.69□□□□□ -0.7
VRK3-205ENST00000593919 AKAP9Q99996 3911 aa10.69□□□□□ -0.7
VRK3-205ENST00000593919 A0A096LNT2 108 aa10.69□□□□□ -0.7
VRK3-205ENST00000593919 ODF3BA8MYP8 253 aa10.69□□□□□ -0.7
VRK3-205ENST00000593919 FAM90A26D6RGX4 464 aa10.69□□□□□ -0.7
VRK3-205ENST00000593919 H0YJW9 148 aa10.69□□□□□ -0.7
VRK3-205ENST00000593919 TOX4O94842 621 aa10.69□□□□□ -0.7
VRK3-205ENST00000593919 RTL8BQ17RB0 113 aa10.69□□□□□ -0.7
VRK3-205ENST00000593919 Q5PR19 223 aa10.69□□□□□ -0.7
VRK3-205ENST00000593919 LDLRAD2Q5SZI1 272 aa10.69□□□□□ -0.7
VRK3-205ENST00000593919 CLRN3Q8NCR9 226 aa10.69□□□□□ -0.7
VRK3-205ENST00000593919 LFNGQ8NES3 379 aa10.69□□□□□ -0.7
VRK3-205ENST00000593919 OR5AN1Q8NGI8 311 aa10.69□□□□□ -0.7
VRK3-205ENST00000593919 SCGB1C1Q8TD33 95 aa10.69□□□□□ -0.7
VRK3-205ENST00000593919 MBD6Q96DN6 1003 aa10.69□□□□□ -0.7
VRK3-205ENST00000593919 RSG1Q9BU20 258 aa10.69□□□□□ -0.7
VRK3-205ENST00000593919 PBDC1Q9BVG4 233 aa10.69□□□□□ -0.7
VRK3-205ENST00000593919 COA4Q9NYJ1 87 aa10.69□□□□□ -0.7
VRK3-205ENST00000593919 AMMECR1Q9Y4X0 333 aaPredicted RBP10.69□□□□□ -0.7
VRK3-205ENST00000593919 H2AFB1P0C5Y9 115 aa10.68□□□□□ -0.7
VRK3-205ENST00000593919 HBG1P69891 147 aa10.68□□□□□ -0.7
VRK3-205ENST00000593919 HBG2P69892 147 aa10.68□□□□□ -0.7
VRK3-205ENST00000593919 CCL20P78556 96 aa10.68□□□□□ -0.7
VRK3-205ENST00000593919 DHRS7BQ6IAN0 325 aaPredicted RBP10.68□□□□□ -0.7
VRK3-205ENST00000593919 SSX9Q7RTT3 188 aa10.68□□□□□ -0.7
VRK3-205ENST00000593919 H2BFWTQ7Z2G1 175 aa10.68□□□□□ -0.7
VRK3-205ENST00000593919 VKORC1L1Q8N0U8 176 aa10.68□□□□□ -0.7
VRK3-205ENST00000593919 TBX15Q96SF7 602 aa10.68□□□□□ -0.7
VRK3-205ENST00000593919 HSPB7Q9UBY9 170 aa10.68□□□□□ -0.7
VRK3-205ENST00000593919 INSIG2Q9Y5U4 225 aa10.68□□□□□ -0.7
VRK3-205ENST00000593919 CSPG4Q6UVK1 2322 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms