RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 C20orf196Q8IYI0 205 aa3.46□□□□□ -1.86
SMAD4-216ENST00000593223 UMODL1-AS1Q8N2C9 162 aa3.46□□□□□ -1.86
SMAD4-216ENST00000593223 NPWQ8N729 165 aa3.46□□□□□ -1.86
SMAD4-216ENST00000593223 OR51S1Q8NGJ8 323 aa3.46□□□□□ -1.86
SMAD4-216ENST00000593223 OR1S1Q8NH92 325 aa3.46□□□□□ -1.86
SMAD4-216ENST00000593223 ZNF420Q8TAQ5 688 aaPredicted RBP3.46□□□□□ -1.86
SMAD4-216ENST00000593223 ZNF675Q8TD23 568 aa3.46□□□□□ -1.86
SMAD4-216ENST00000593223 CANT1Q8WVQ1 401 aa3.46□□□□□ -1.86
SMAD4-216ENST00000593223 ELSPBP1Q96BH3 223 aa3.46□□□□□ -1.86
SMAD4-216ENST00000593223 GALMQ96C23 342 aa3.46□□□□□ -1.86
SMAD4-216ENST00000593223 C14orf144Q96I85 54 aa3.46□□□□□ -1.86
SMAD4-216ENST00000593223 BMFQ96LC9 184 aa3.46□□□□□ -1.86
SMAD4-216ENST00000593223 METTL26Q96S19 204 aa3.46□□□□□ -1.86
SMAD4-216ENST00000593223 KIR2DL4Q99706 377 aa3.46□□□□□ -1.86
SMAD4-216ENST00000593223 TBL1XR1Q9BZK7 514 aa3.46□□□□□ -1.86
SMAD4-216ENST00000593223 ACER3Q9NUN7 267 aa3.46□□□□□ -1.86
SMAD4-216ENST00000593223 FAIMQ9NVQ4 179 aa3.46□□□□□ -1.86
SMAD4-216ENST00000593223 SSR3Q9UNL2 185 aa3.46□□□□□ -1.86
SMAD4-216ENST00000593223 ACANP16112 2415 aa3.46□□□□□ -1.86
SMAD4-216ENST00000593223 RP1L1Q8IWN7 2480 aaPredicted RBP3.46□□□□□ -1.86
SMAD4-216ENST00000593223 PRRC2AP48634 2157 aaKnown RBP3.45□□□□□ -1.86
SMAD4-216ENST00000593223 A0A1B0GX51 115 aa3.45□□□□□ -1.86
SMAD4-216ENST00000593223 FAM92AA1XBS5 289 aa3.45□□□□□ -1.86
SMAD4-216ENST00000593223 TMEM189A5PLL7 270 aa3.45□□□□□ -1.86
SMAD4-216ENST00000593223 RBMY1BA6NDE4 496 aaKnown RBP3.45□□□□□ -1.86
SMAD4-216ENST00000593223 RBMY1EA6NEQ0 496 aaKnown RBP3.45□□□□□ -1.86
SMAD4-216ENST00000593223 OR5H14A6NHG9 310 aa3.45□□□□□ -1.86
SMAD4-216ENST00000593223 C12orf77C9JDV5 145 aa3.45□□□□□ -1.86
SMAD4-216ENST00000593223 AIPO00170 330 aa3.45□□□□□ -1.86
SMAD4-216ENST00000593223 RGS5O15539 181 aa3.45□□□□□ -1.86
SMAD4-216ENST00000593223 GGCTO75223 188 aaKnown RBP3.45□□□□□ -1.86
SMAD4-216ENST00000593223 MMP23AO75900 390 aa3.45□□□□□ -1.86
SMAD4-216ENST00000593223 OR2A4O95047 310 aa3.45□□□□□ -1.86
SMAD4-216ENST00000593223 REG1AP05451 166 aa3.45□□□□□ -1.86
SMAD4-216ENST00000593223 RBMY1DP0C7P1 496 aaKnown RBP3.45□□□□□ -1.86
SMAD4-216ENST00000593223 RBMY1A1P0DJD3 496 aaKnown RBP3.45□□□□□ -1.86
SMAD4-216ENST00000593223 ERGP11308 486 aa3.45□□□□□ -1.86
SMAD4-216ENST00000593223 SPNP16150 400 aa3.45□□□□□ -1.86
SMAD4-216ENST00000593223 ZNF25P17030 456 aaPredicted RBP3.45□□□□□ -1.86
SMAD4-216ENST00000593223 S100A7P31151 101 aa3.45□□□□□ -1.86
SMAD4-216ENST00000593223 PSMB2P49721 201 aa3.45□□□□□ -1.86
SMAD4-216ENST00000593223 KRTAP12-2P59991 146 aa3.45□□□□□ -1.86
SMAD4-216ENST00000593223 PRR3P79522 188 aaKnown RBP3.45□□□□□ -1.86
SMAD4-216ENST00000593223 MRPS10P82664 201 aaKnown RBP3.45□□□□□ -1.86
SMAD4-216ENST00000593223 LAMTOR4Q0VGL1 99 aa3.45□□□□□ -1.86
SMAD4-216ENST00000593223 C1DQ13901 141 aaKnown RBP3.45□□□□□ -1.86
SMAD4-216ENST00000593223 CLLU1OSQ5K130 101 aa3.45□□□□□ -1.86
SMAD4-216ENST00000593223 C9orf129Q5T035 196 aaKnown RBP3.45□□□□□ -1.86
SMAD4-216ENST00000593223 ALKAL1Q6UXT8 129 aa3.45□□□□□ -1.86
SMAD4-216ENST00000593223 SCGB1D4Q6XE38 83 aa3.45□□□□□ -1.86
SMAD4-216ENST00000593223 DEFB119Q8N690 84 aa3.45□□□□□ -1.86
SMAD4-216ENST00000593223 OR5A1Q8NGJ0 315 aa3.45□□□□□ -1.86
SMAD4-216ENST00000593223 OR8S1Q8NH09 359 aa3.45□□□□□ -1.86
SMAD4-216ENST00000593223 GALNT14Q96FL9 552 aa3.45□□□□□ -1.86
SMAD4-216ENST00000593223 OR2A7Q96R45 310 aa3.45□□□□□ -1.86
SMAD4-216ENST00000593223 PDCD10Q9BUL8 212 aa3.45□□□□□ -1.86
SMAD4-216ENST00000593223 PBDC1Q9BVG4 233 aa3.45□□□□□ -1.86
SMAD4-216ENST00000593223 C20orf85Q9H1P6 137 aa3.45□□□□□ -1.86
SMAD4-216ENST00000593223 XCL2Q9UBD3 114 aa3.45□□□□□ -1.86
SMAD4-216ENST00000593223 RBM7Q9Y580 266 aaKnown RBP3.45□□□□□ -1.86
SMAD4-216ENST00000593223 FLVCR1Q9Y5Y0 555 aa3.45□□□□□ -1.86
SMAD4-216ENST00000593223 VPS13CQ709C8 3753 aa3.45□□□□□ -1.86
SMAD4-216ENST00000593223 MEGF8Q7Z7M0 2845 aa3.45□□□□□ -1.86
SMAD4-216ENST00000593223 TDRD6O60522 2096 aaKnown RBP3.45□□□□□ -1.86
SMAD4-216ENST00000593223 TNRC6BQ9UPQ9 1833 aaKnown RBP3.44□□□□□ -1.86
SMAD4-216ENST00000593223 MTCL1Q9Y4B5 1905 aaKnown RBP3.44□□□□□ -1.86
SMAD4-216ENST00000593223 TLN2Q9Y4G6 2542 aa3.44□□□□□ -1.86
SMAD4-216ENST00000593223 IGLV8-61A0A075B6I0 122 aa3.44□□□□□ -1.86
SMAD4-216ENST00000593223 A0A087WX48 190 aa3.44□□□□□ -1.86
SMAD4-216ENST00000593223 IGLV1-36A0A0B4J1U3 117 aa3.44□□□□□ -1.86
SMAD4-216ENST00000593223 TRAV8-6A0A0B4J262 113 aa3.44□□□□□ -1.86
SMAD4-216ENST00000593223 hADV38S2A0JD32 116 aa3.44□□□□□ -1.86
SMAD4-216ENST00000593223 MYBPHLA2RUH7 354 aa3.44□□□□□ -1.86
SMAD4-216ENST00000593223 C5orf49A4QMS7 147 aa3.44□□□□□ -1.86
SMAD4-216ENST00000593223 TRAPPC13A5PLN9 417 aa3.44□□□□□ -1.86
SMAD4-216ENST00000593223 FAM183AA6NL82 134 aa3.44□□□□□ -1.86
SMAD4-216ENST00000593223 H0Y9J4 135 aa3.44□□□□□ -1.86
SMAD4-216ENST00000593223 H7C1C5 153 aa3.44□□□□□ -1.86
SMAD4-216ENST00000593223 K7EPK0 472 aa3.44□□□□□ -1.86
SMAD4-216ENST00000593223 XKRYO14609 159 aa3.44□□□□□ -1.86
SMAD4-216ENST00000593223 CCL16O15467 120 aa3.44□□□□□ -1.86
SMAD4-216ENST00000593223 NPIPB7O75200 414 aa3.44□□□□□ -1.86
SMAD4-216ENST00000593223 PDCD6O75340 191 aa3.44□□□□□ -1.86
SMAD4-216ENST00000593223 POP7O75817 140 aaKnown RBP3.44□□□□□ -1.86
SMAD4-216ENST00000593223 UBBP0CG47 229 aa3.44□□□□□ -1.86
SMAD4-216ENST00000593223 OR5H8P0DN80 308 aa3.44□□□□□ -1.86
SMAD4-216ENST00000593223 CXCL2P19875 107 aa3.44□□□□□ -1.86
SMAD4-216ENST00000593223 CXCL3P19876 107 aa3.44□□□□□ -1.86
SMAD4-216ENST00000593223 IGHV1-2P23083 117 aa3.44□□□□□ -1.86
SMAD4-216ENST00000593223 PRTN3P24158 256 aa3.44□□□□□ -1.86
SMAD4-216ENST00000593223 GLRXP35754 106 aa3.44□□□□□ -1.86
SMAD4-216ENST00000593223 DAD1P61803 113 aa3.44□□□□□ -1.86
SMAD4-216ENST00000593223 RRAS2P62070 204 aaPredicted RBP3.44□□□□□ -1.86
SMAD4-216ENST00000593223 LCN6P62502 163 aa3.44□□□□□ -1.86
SMAD4-216ENST00000593223 SELENOWP63302 87 aa3.44□□□□□ -1.86
SMAD4-216ENST00000593223 ZNF266Q14584 549 aa3.44□□□□□ -1.86
SMAD4-216ENST00000593223 PAFAH1B3Q15102 231 aaKnown RBP3.44□□□□□ -1.86
SMAD4-216ENST00000593223 FAM78AQ5JUQ0 283 aa3.44□□□□□ -1.86
SMAD4-216ENST00000593223 FAM201AQ5SY85 155 aa3.44□□□□□ -1.86
SMAD4-216ENST00000593223 PLET1Q6UQ28 207 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms