RNA–Protein interactions for RNA: ENST00000593128.5

CIRBP-243, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-243ENST00000593128 CCDC140Q96MF4 163 aa13.54□□□□□ -0.24
CIRBP-243ENST00000593128 FANCD2OSQ96PS1 177 aa13.54□□□□□ -0.24
CIRBP-243ENST00000593128 DIABLOQ9NR28 239 aa13.54□□□□□ -0.24
CIRBP-243ENST00000593128 CATR1Q13166 79 aa13.53□□□□□ -0.24
CIRBP-243ENST00000593128 LAX1Q8IWV1 398 aa13.53□□□□□ -0.24
CIRBP-243ENST00000593128 DMBX1Q8NFW5 382 aa13.53□□□□□ -0.24
CIRBP-243ENST00000593128 IFT46Q9NQC8 304 aa13.53□□□□□ -0.24
CIRBP-243ENST00000593128 TECRQ9NZ01 308 aaKnown RBP13.53□□□□□ -0.24
CIRBP-243ENST00000593128 DMRT1Q9Y5R6 373 aa13.53□□□□□ -0.24
CIRBP-243ENST00000593128 RBMY1BA6NDE4 496 aaKnown RBP13.52□□□□□ -0.25
CIRBP-243ENST00000593128 RBMY1EA6NEQ0 496 aaKnown RBP13.52□□□□□ -0.25
CIRBP-243ENST00000593128 CRYGCP07315 174 aa13.52□□□□□ -0.25
CIRBP-243ENST00000593128 RBMY1DP0C7P1 496 aaKnown RBP13.52□□□□□ -0.25
CIRBP-243ENST00000593128 HIST1H1BP16401 226 aaKnown RBP13.52□□□□□ -0.25
CIRBP-243ENST00000593128 CTRB1P17538 263 aa13.52□□□□□ -0.25
CIRBP-243ENST00000593128 CBLN1P23435 193 aa13.52□□□□□ -0.25
CIRBP-243ENST00000593128 HERV-K104P61576 105 aa13.52□□□□□ -0.25
CIRBP-243ENST00000593128 FAM106AQ4KMX7 169 aa13.52□□□□□ -0.25
CIRBP-243ENST00000593128 AADACL3Q5VUY0 350 aa13.52□□□□□ -0.25
CIRBP-243ENST00000593128 CTRB2Q6GPI1 263 aa13.52□□□□□ -0.25
CIRBP-243ENST00000593128 OR4A5Q8NH83 315 aa13.52□□□□□ -0.25
CIRBP-243ENST00000593128 AIFM2Q9BRQ8 373 aa13.52□□□□□ -0.25
CIRBP-243ENST00000593128 YTHDF1Q9BYJ9 559 aaKnown RBP13.52□□□□□ -0.25
CIRBP-243ENST00000593128 HIPK2Q9H2X6 1198 aa13.52□□□□□ -0.25
CIRBP-243ENST00000593128 AUNIPQ9H7T9 357 aa13.52□□□□□ -0.25
CIRBP-243ENST00000593128 BET1LQ9NYM9 111 aa13.52□□□□□ -0.25
CIRBP-243ENST00000593128 TRAV3A0A0B4J244 114 aa13.51□□□□□ -0.25
CIRBP-243ENST00000593128 IGHV3-35A0A0C4DH35 117 aa13.51□□□□□ -0.25
CIRBP-243ENST00000593128 MFSD2BA6NFX1 497 aa13.51□□□□□ -0.25
CIRBP-243ENST00000593128 LGALS9O00182 355 aa13.51□□□□□ -0.25
CIRBP-243ENST00000593128 SCAF4O95104 1147 aaKnown RBP13.51□□□□□ -0.25
CIRBP-243ENST00000593128 GPR183P32249 361 aa13.51□□□□□ -0.25
CIRBP-243ENST00000593128 ZNF57Q68EA5 555 aaPredicted RBP13.51□□□□□ -0.25
CIRBP-243ENST00000593128 SLC16A13Q7RTY0 426 aa13.51□□□□□ -0.25
CIRBP-243ENST00000593128 GPHB5Q86YW7 130 aa13.51□□□□□ -0.25
CIRBP-243ENST00000593128 ZBTB34Q8NCN2 500 aa13.51□□□□□ -0.25
CIRBP-243ENST00000593128 LYSTQ99698 3801 aa13.51□□□□□ -0.25
CIRBP-243ENST00000593128 COMMD5Q9GZQ3 224 aa13.51□□□□□ -0.25
CIRBP-243ENST00000593128 CSMD3Q7Z407 3707 aa13.51□□□□□ -0.25
CIRBP-243ENST00000593128 CGB1A6NKQ9 187 aa13.5□□□□□ -0.25
CIRBP-243ENST00000593128 S1PR2O95136 353 aa13.5□□□□□ -0.25
CIRBP-243ENST00000593128 CLEC3BP05452 202 aa13.5□□□□□ -0.25
CIRBP-243ENST00000593128 NQO2P16083 231 aa13.5□□□□□ -0.25
CIRBP-243ENST00000593128 SCAND1P57086 179 aa13.5□□□□□ -0.25
CIRBP-243ENST00000593128 OR2B8PP59922 312 aa13.5□□□□□ -0.25
CIRBP-243ENST00000593128 BTNL8Q6UX41 500 aa13.5□□□□□ -0.25
CIRBP-243ENST00000593128 ZNF818PQ6ZRF7 136 aa13.5□□□□□ -0.25
CIRBP-243ENST00000593128 TMEM61Q8N0U2 210 aa13.5□□□□□ -0.25
CIRBP-243ENST00000593128 UXS1Q8NBZ7 420 aa13.5□□□□□ -0.25
CIRBP-243ENST00000593128 OR52B4Q8NGK2 314 aa13.5□□□□□ -0.25
CIRBP-243ENST00000593128 CXorf58Q96LI9 332 aa13.5□□□□□ -0.25
CIRBP-243ENST00000593128 TMEM140Q9NV12 185 aa13.5□□□□□ -0.25
CIRBP-243ENST00000593128 EHFQ9NZC4 300 aa13.5□□□□□ -0.25
CIRBP-243ENST00000593128 MLXQ9UH92 298 aa13.5□□□□□ -0.25
CIRBP-243ENST00000593128 IGLV11-55A0A075B6I3 123 aa13.49□□□□□ -0.25
CIRBP-243ENST00000593128 A0A0A6YYH2 397 aa13.49□□□□□ -0.25
CIRBP-243ENST00000593128 TRBV7-1A0A0A6YYK4 115 aa13.49□□□□□ -0.25
CIRBP-243ENST00000593128 TMEM213A2RRL7 107 aa13.49□□□□□ -0.25
CIRBP-243ENST00000593128 A6NJ64 397 aa13.49□□□□□ -0.25
CIRBP-243ENST00000593128 UPK2O00526 184 aa13.49□□□□□ -0.25
CIRBP-243ENST00000593128 HPRT1P00492 218 aa13.49□□□□□ -0.25
CIRBP-243ENST00000593128 TGFBR1P36897 503 aa13.49□□□□□ -0.25
CIRBP-243ENST00000593128 CBX5P45973 191 aa13.49□□□□□ -0.25
CIRBP-243ENST00000593128 TAS2R31P59538 309 aa13.49□□□□□ -0.25
CIRBP-243ENST00000593128 TM4SF20Q53R12 229 aa13.49□□□□□ -0.25
CIRBP-243ENST00000593128 LINC00322Q6ZN03 302 aaPredicted RBP13.49□□□□□ -0.25
CIRBP-243ENST00000593128 OR5AP2Q8NGF4 316 aa13.49□□□□□ -0.25
CIRBP-243ENST00000593128 HINT2Q9BX68 163 aa13.49□□□□□ -0.25
CIRBP-243ENST00000593128 PMP2P02689 132 aa13.48□□□□□ -0.25
CIRBP-243ENST00000593128 ERVK-16P61578 105 aa13.48□□□□□ -0.25
CIRBP-243ENST00000593128 MSMO1Q15800 293 aa13.48□□□□□ -0.25
CIRBP-243ENST00000593128 ZNF585BQ52M93 769 aa13.48□□□□□ -0.25
CIRBP-243ENST00000593128 PLET1Q6UQ28 207 aa13.48□□□□□ -0.25
CIRBP-243ENST00000593128 UNQ9165/PRO28630Q6UXU0 137 aa13.48□□□□□ -0.25
CIRBP-243ENST00000593128 OR10W1Q8NGF6 305 aa13.48□□□□□ -0.25
CIRBP-243ENST00000593128 IGLC7A0M8Q6 106 aa13.47□□□□□ -0.25
CIRBP-243ENST00000593128 RBFOX2O43251 390 aaKnown RBP eCLIP13.47□□□□□ -0.253e-24■■□□□ 13.9
CIRBP-243ENST00000593128 RLN1P04808 185 aa13.47□□□□□ -0.25
CIRBP-243ENST00000593128 LSM3P62310 102 aaKnown RBP13.47□□□□□ -0.25
CIRBP-243ENST00000593128 RBPMS2Q6ZRY4 209 aaKnown RBP13.47□□□□□ -0.25
CIRBP-243ENST00000593128 TSPAN14Q8NG11 270 aa13.47□□□□□ -0.25
CIRBP-243ENST00000593128 S100A16Q96FQ6 103 aaKnown RBP13.47□□□□□ -0.25
CIRBP-243ENST00000593128 ZNF2Q9BSG1 426 aaPredicted RBP13.47□□□□□ -0.25
CIRBP-243ENST00000593128 QTRT1Q9BXR0 403 aaKnown RBP13.47□□□□□ -0.25
CIRBP-243ENST00000593128 THYN1Q9P016 225 aa13.47□□□□□ -0.25
CIRBP-243ENST00000593128 IGHV3-21A0A0B4J1V1 117 aa13.46□□□□□ -0.25
CIRBP-243ENST00000593128 RFX2P48378 723 aa13.46□□□□□ -0.25
CIRBP-243ENST00000593128 TMEM69Q5SWH9 247 aa13.46□□□□□ -0.25
CIRBP-243ENST00000593128 SLC25A24Q6NUK1 477 aa13.46□□□□□ -0.25
CIRBP-243ENST00000593128 IL17DQ8TAD2 202 aa13.46□□□□□ -0.25
CIRBP-243ENST00000593128 CD300LFQ8TDQ1 290 aa13.46□□□□□ -0.25
CIRBP-243ENST00000593128 GIMAP1Q8WWP7 306 aa13.46□□□□□ -0.25
CIRBP-243ENST00000593128 HYDINQ4G0P3 5121 aa13.46□□□□□ -0.26
CIRBP-243ENST00000593128 OR2T8A6NH00 312 aa13.45□□□□□ -0.26
CIRBP-243ENST00000593128 A8MWP6 167 aa13.45□□□□□ -0.26
CIRBP-243ENST00000593128 CYB5BO43169 146 aa13.45□□□□□ -0.26
CIRBP-243ENST00000593128 XRCC3O43542 346 aa13.45□□□□□ -0.26
CIRBP-243ENST00000593128 JTBO76095 146 aa13.45□□□□□ -0.26
CIRBP-243ENST00000593128 TRAPPC2P0DI81 140 aa13.45□□□□□ -0.26
CIRBP-243ENST00000593128 TRAPPC2BP0DI82 140 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms