RNA–Protein interactions for RNA: ENST00000592619.5

VMP1-215, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-215ENST00000592619 THEM6Q8WUY1 208 aa4.55□□□□□ -1.68
VMP1-215ENST00000592619 SLC7A6Q92536 515 aa4.55□□□□□ -1.68
VMP1-215ENST00000592619 ARL11Q969Q4 196 aa4.55□□□□□ -1.68
VMP1-215ENST00000592619 FMC1Q96HJ9 113 aa4.55□□□□□ -1.68
VMP1-215ENST00000592619 KLF6Q99612 283 aaPredicted RBP4.55□□□□□ -1.68
VMP1-215ENST00000592619 SULT4A1Q9BR01 284 aa4.55□□□□□ -1.68
VMP1-215ENST00000592619 ZNF649Q9BS31 505 aa4.55□□□□□ -1.68
VMP1-215ENST00000592619 TMEM70Q9BUB7 260 aa4.55□□□□□ -1.68
VMP1-215ENST00000592619 EMC6Q9BV81 110 aa4.55□□□□□ -1.68
VMP1-215ENST00000592619 ULBP3Q9BZM4 244 aa4.55□□□□□ -1.68
VMP1-215ENST00000592619 OR51I2Q9H344 312 aa4.55□□□□□ -1.68
VMP1-215ENST00000592619 TNFRSF19Q9NS68 423 aa4.55□□□□□ -1.68
VMP1-215ENST00000592619 RSL24D1Q9UHA3 163 aaKnown RBP4.55□□□□□ -1.68
VMP1-215ENST00000592619 SSR3Q9UNL2 185 aa4.55□□□□□ -1.68
VMP1-215ENST00000592619 HDGFL3Q9Y3E1 203 aa4.55□□□□□ -1.68
VMP1-215ENST00000592619 PLXNA2O75051 1894 aa4.55□□□□□ -1.68
VMP1-215ENST00000592619 MUC6Q6W4X9 2439 aa4.55□□□□□ -1.68
VMP1-215ENST00000592619 TP53BP1Q12888 1972 aaPredicted RBP4.54□□□□□ -1.68
VMP1-215ENST00000592619 SPAG17Q6Q759 2223 aa4.54□□□□□ -1.68
VMP1-215ENST00000592619 TRAV8-4A0A0B4J246 113 aa4.54□□□□□ -1.68
VMP1-215ENST00000592619 LINC01619G3V211 115 aa4.54□□□□□ -1.68
VMP1-215ENST00000592619 H7C1C5 153 aa4.54□□□□□ -1.68
VMP1-215ENST00000592619 H7C417 338 aa4.54□□□□□ -1.68
VMP1-215ENST00000592619 P01737 135 aa4.54□□□□□ -1.68
VMP1-215ENST00000592619 HLA-DQB2P05538 268 aa4.54□□□□□ -1.68
VMP1-215ENST00000592619 IGHV4-34P06331 123 aa4.54□□□□□ -1.68
VMP1-215ENST00000592619 PSG2P11465 335 aa4.54□□□□□ -1.68
VMP1-215ENST00000592619 TCN2P20062 427 aa4.54□□□□□ -1.68
VMP1-215ENST00000592619 EVI2AP22794 236 aa4.54□□□□□ -1.68
VMP1-215ENST00000592619 ZBTB25P24278 435 aa4.54□□□□□ -1.68
VMP1-215ENST00000592619 APLNRP35414 380 aa4.54□□□□□ -1.68
VMP1-215ENST00000592619 TAS2R30P59541 319 aa4.54□□□□□ -1.68
VMP1-215ENST00000592619 RPL26P61254 145 aaKnown RBP4.54□□□□□ -1.68
VMP1-215ENST00000592619 LCN6P62502 163 aa4.54□□□□□ -1.68
VMP1-215ENST00000592619 RPS21P63220 83 aaKnown RBP4.54□□□□□ -1.68
VMP1-215ENST00000592619 PRDX1Q06830 199 aaKnown RBP4.54□□□□□ -1.68
VMP1-215ENST00000592619 ZNF763Q0D2J5 394 aa4.54□□□□□ -1.68
VMP1-215ENST00000592619 NEDD8Q15843 81 aa4.54□□□□□ -1.68
VMP1-215ENST00000592619 PABPC1L2AQ5JQF8 200 aa4.54□□□□□ -1.68
VMP1-215ENST00000592619 TMEM255AQ5JRV8 349 aa4.54□□□□□ -1.68
VMP1-215ENST00000592619 IGFL2Q6UWQ7 119 aa4.54□□□□□ -1.68
VMP1-215ENST00000592619 ZNF550Q7Z398 422 aa4.54□□□□□ -1.68
VMP1-215ENST00000592619 NAA40Q86UY6 237 aa4.54□□□□□ -1.68
VMP1-215ENST00000592619 C4orf33Q8N1A6 199 aa4.54□□□□□ -1.68
VMP1-215ENST00000592619 C14orf178Q8N769 122 aaPredicted RBP4.54□□□□□ -1.68
VMP1-215ENST00000592619 ZNF615Q8N8J6 731 aa4.54□□□□□ -1.68
VMP1-215ENST00000592619 NKAPP1Q8N9T2 125 aa4.54□□□□□ -1.68
VMP1-215ENST00000592619 OR5P3Q8WZ94 311 aa4.54□□□□□ -1.68
VMP1-215ENST00000592619 TMEM54Q969K7 222 aa4.54□□□□□ -1.68
VMP1-215ENST00000592619 TMEM230Q96A57 120 aa4.54□□□□□ -1.68
VMP1-215ENST00000592619 SLC35G5Q96KT7 338 aa4.54□□□□□ -1.68
VMP1-215ENST00000592619 OR51E2Q9H255 320 aa4.54□□□□□ -1.68
VMP1-215ENST00000592619 C14orf105Q9NVL8 296 aa4.54□□□□□ -1.68
VMP1-215ENST00000592619 NAT8BQ9UHF3 227 aa4.54□□□□□ -1.68
VMP1-215ENST00000592619 VAX2Q9UIW0 290 aa4.54□□□□□ -1.68
VMP1-215ENST00000592619 RPL26L1Q9UNX3 145 aaKnown RBP4.54□□□□□ -1.68
VMP1-215ENST00000592619 VSIG4Q9Y279 399 aa4.54□□□□□ -1.68
VMP1-215ENST00000592619 YTHDF2Q9Y5A9 579 aaKnown RBP4.54□□□□□ -1.68
VMP1-215ENST00000592619 RFNGQ9Y644 331 aa4.54□□□□□ -1.68
VMP1-215ENST00000592619 DMXL1Q9Y485 3027 aa4.54□□□□□ -1.68
VMP1-215ENST00000592619 PCDH15Q96QU1 1955 aa4.54□□□□□ -1.68
VMP1-215ENST00000592619 CFAP54Q96N23 3096 aa4.53□□□□□ -1.68
VMP1-215ENST00000592619 IGKV3D-20A0A0C4DH25 116 aa4.53□□□□□ -1.68
VMP1-215ENST00000592619 A0A0G2JLM5 398 aa4.53□□□□□ -1.68
VMP1-215ENST00000592619 hADV38S2A0JD32 116 aa4.53□□□□□ -1.68
VMP1-215ENST00000592619 LEUTXA8MZ59 168 aa4.53□□□□□ -1.68
VMP1-215ENST00000592619 F6UB75 175 aa4.53□□□□□ -1.68
VMP1-215ENST00000592619 REM1O75628 298 aa4.53□□□□□ -1.68
VMP1-215ENST00000592619 C6orf47O95873 294 aa4.53□□□□□ -1.68
VMP1-215ENST00000592619 IGKV1D-16P01601 117 aa4.53□□□□□ -1.68
VMP1-215ENST00000592619 RAB3BP20337 219 aa4.53□□□□□ -1.68
VMP1-215ENST00000592619 BLVRBP30043 206 aaPredicted RBP4.53□□□□□ -1.68
VMP1-215ENST00000592619 CMPK1P30085 196 aa4.53□□□□□ -1.68
VMP1-215ENST00000592619 AGTR1P30556 359 aa4.53□□□□□ -1.68
VMP1-215ENST00000592619 SRIP30626 198 aa4.53□□□□□ -1.68
VMP1-215ENST00000592619 HBA1P69905 142 aa4.53□□□□□ -1.68
VMP1-215ENST00000592619 PSG9Q00887 426 aa4.53□□□□□ -1.68
VMP1-215ENST00000592619 RGNQ15493 299 aa4.53□□□□□ -1.68
VMP1-215ENST00000592619 PAGE3Q5JUK9 113 aa4.53□□□□□ -1.68
VMP1-215ENST00000592619 C9orf129Q5T035 196 aaKnown RBP4.53□□□□□ -1.68
VMP1-215ENST00000592619 LCE1EQ5T753 118 aa4.53□□□□□ -1.68
VMP1-215ENST00000592619 GLYATQ6IB77 296 aa4.53□□□□□ -1.68
VMP1-215ENST00000592619 Q6ZSR6 202 aa4.53□□□□□ -1.68
VMP1-215ENST00000592619 TMEM179BQ7Z7N9 219 aa4.53□□□□□ -1.68
VMP1-215ENST00000592619 TGIF2LYQ8IUE0 185 aa4.53□□□□□ -1.68
VMP1-215ENST00000592619 C12orf45Q8N5I9 185 aaPredicted RBP4.53□□□□□ -1.68
VMP1-215ENST00000592619 NEIL3Q8TAT5 605 aa4.53□□□□□ -1.68
VMP1-215ENST00000592619 C7orf33Q8WU49 177 aa4.53□□□□□ -1.68
VMP1-215ENST00000592619 DCAKDQ8WVC6 231 aa4.53□□□□□ -1.68
VMP1-215ENST00000592619 DCUN1D4Q92564 292 aa4.53□□□□□ -1.68
VMP1-215ENST00000592619 PLEKHB2Q96CS7 222 aa4.53□□□□□ -1.68
VMP1-215ENST00000592619 FAM19A4Q96LR4 140 aa4.53□□□□□ -1.68
VMP1-215ENST00000592619 LYSMD1Q96S90 227 aa4.53□□□□□ -1.68
VMP1-215ENST00000592619 PBDC1Q9BVG4 233 aa4.53□□□□□ -1.68
VMP1-215ENST00000592619 C20orf27Q9GZN8 174 aa4.53□□□□□ -1.68
VMP1-215ENST00000592619 RNASE7Q9H1E1 156 aaKnown RBP4.53□□□□□ -1.68
VMP1-215ENST00000592619 CST9LQ9H4G1 147 aa4.53□□□□□ -1.68
VMP1-215ENST00000592619 POPDC3Q9HBV1 291 aa4.53□□□□□ -1.68
VMP1-215ENST00000592619 TMEM9BQ9NQ34 198 aa4.53□□□□□ -1.68
VMP1-215ENST00000592619 RPS6KB2Q9UBS0 482 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms