RNA–Protein interactions for RNA: ENST00000590630.5

LIG3-213, Transcript of DNA ligase 3, humanhuman

TSL 5

Gene LIG3, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-213ENST00000590630 OR6Q1Q8NGQ2 317 aa9.24□□□□□ -0.93
LIG3-213ENST00000590630 OR13C8Q8NGS7 320 aa9.24□□□□□ -0.93
LIG3-213ENST00000590630 MARCH1Q8TCQ1 289 aa9.24□□□□□ -0.93
LIG3-213ENST00000590630 DEDD2Q8WXF8 326 aa9.24□□□□□ -0.93
LIG3-213ENST00000590630 TRIM63Q969Q1 353 aa9.24□□□□□ -0.93
LIG3-213ENST00000590630 MRGPRFQ96AM1 343 aa9.24□□□□□ -0.93
LIG3-213ENST00000590630 RCC1LQ96I51 464 aaKnown RBP9.24□□□□□ -0.93
LIG3-213ENST00000590630 MS4A10Q96PG2 267 aa9.24□□□□□ -0.93
LIG3-213ENST00000590630 GNB4Q9HAV0 340 aa9.24□□□□□ -0.93
LIG3-213ENST00000590630 COA4Q9NYJ1 87 aa9.24□□□□□ -0.93
LIG3-213ENST00000590630 COPZ2Q9P299 210 aa9.24□□□□□ -0.93
LIG3-213ENST00000590630 SCP2D1Q9UJQ7 156 aa9.24□□□□□ -0.93
LIG3-213ENST00000590630 TEX22C9J3V5 150 aa9.23□□□□□ -0.93
LIG3-213ENST00000590630 H0Y980 276 aa9.23□□□□□ -0.93
LIG3-213ENST00000590630 UPK2O00526 184 aa9.23□□□□□ -0.93
LIG3-213ENST00000590630 B3GALNT1O75752 331 aa9.23□□□□□ -0.93
LIG3-213ENST00000590630 KRASP01116 189 aa9.23□□□□□ -0.93
LIG3-213ENST00000590630 CTSDP07339 412 aaPredicted RBP9.23□□□□□ -0.93
LIG3-213ENST00000590630 LGALS1P09382 135 aaKnown RBP9.23□□□□□ -0.93
LIG3-213ENST00000590630 APELAP0DMC3 54 aa9.23□□□□□ -0.93
LIG3-213ENST00000590630 RPA2P15927 270 aa9.23□□□□□ -0.93
LIG3-213ENST00000590630 TTC9CQ8N5M4 171 aa9.23□□□□□ -0.93
LIG3-213ENST00000590630 OR11H1Q8NG94 326 aa9.23□□□□□ -0.93
LIG3-213ENST00000590630 OR51S1Q8NGJ8 323 aa9.23□□□□□ -0.93
LIG3-213ENST00000590630 DUX3Q96PT4 197 aa9.23□□□□□ -0.93
LIG3-213ENST00000590630 OR5B12Q96R08 314 aa9.23□□□□□ -0.93
LIG3-213ENST00000590630 COMMD5Q9GZQ3 224 aa9.23□□□□□ -0.93
LIG3-213ENST00000590630 C14orf166Q9Y224 244 aaKnown RBP9.23□□□□□ -0.93
LIG3-213ENST00000590630 C3orf85A0A1B0GTC6 90 aa9.22□□□□□ -0.93
LIG3-213ENST00000590630 C13orf42A0A1B0GVH6 325 aa9.22□□□□□ -0.93
LIG3-213ENST00000590630 NPIPB5A8MRT5 1133 aa9.22□□□□□ -0.93
LIG3-213ENST00000590630 G3V4G9 280 aa9.22□□□□□ -0.93
LIG3-213ENST00000590630 OR8U8P0C7N1 319 aa9.22□□□□□ -0.93
LIG3-213ENST00000590630 G6PCP35575 357 aa9.22□□□□□ -0.93
LIG3-213ENST00000590630 OR2B8PP59922 312 aa9.22□□□□□ -0.93
LIG3-213ENST00000590630 ZNF616Q08AN1 781 aa9.22□□□□□ -0.93
LIG3-213ENST00000590630 KLF9Q13886 244 aaPredicted RBP9.22□□□□□ -0.93
LIG3-213ENST00000590630 KPRPQ5T749 579 aaPredicted RBP9.22□□□□□ -0.93
LIG3-213ENST00000590630 THOC7Q6I9Y2 204 aaKnown RBP9.22□□□□□ -0.93
LIG3-213ENST00000590630 TOMM5Q8N4H5 51 aa9.22□□□□□ -0.93
LIG3-213ENST00000590630 OR1N2Q8NGR9 330 aa9.22□□□□□ -0.93
LIG3-213ENST00000590630 USMG5Q96IX5 58 aa9.22□□□□□ -0.93
LIG3-213ENST00000590630 FYTTD1Q96QD9 318 aaKnown RBP9.22□□□□□ -0.93
LIG3-213ENST00000590630 SRSF8Q9BRL6 282 aaKnown RBP9.22□□□□□ -0.93
LIG3-213ENST00000590630 MCRIP2Q9BUT9 160 aaKnown RBP9.22□□□□□ -0.93
LIG3-213ENST00000590630 GPR61Q9BZJ8 451 aa9.22□□□□□ -0.93
LIG3-213ENST00000590630 SRRQ9GZT4 340 aa9.22□□□□□ -0.93
LIG3-213ENST00000590630 MCUBQ9NWR8 336 aa9.22□□□□□ -0.93
LIG3-213ENST00000590630 ZNF257Q9Y2Q1 563 aa9.22□□□□□ -0.93
LIG3-213ENST00000590630 TRAV3A0A0B4J244 114 aa9.21□□□□□ -0.94
LIG3-213ENST00000590630 A0A1B0GW64 132 aa9.21□□□□□ -0.94
LIG3-213ENST00000590630 HMX3A6NHT5 357 aa9.21□□□□□ -0.94
LIG3-213ENST00000590630 FAM223BA6NKX1 122 aa9.21□□□□□ -0.94
LIG3-213ENST00000590630 E7EUB6 86 aa9.21□□□□□ -0.94
LIG3-213ENST00000590630 SNAPC5O75971 98 aa9.21□□□□□ -0.94
LIG3-213ENST00000590630 ATG12O94817 140 aa9.21□□□□□ -0.94
LIG3-213ENST00000590630 DHFRP00374 187 aa9.21□□□□□ -0.94
LIG3-213ENST00000590630 IGLL1P15814 213 aa9.21□□□□□ -0.94
LIG3-213ENST00000590630 RAB25P57735 213 aa9.21□□□□□ -0.94
LIG3-213ENST00000590630 OXLD1Q5BKU9 147 aa9.21□□□□□ -0.94
LIG3-213ENST00000590630 C1QL4Q86Z23 238 aa9.21□□□□□ -0.94
LIG3-213ENST00000590630 FAM223AQ8IWN6 122 aa9.21□□□□□ -0.94
LIG3-213ENST00000590630 GDPD1Q8N9F7 314 aa9.21□□□□□ -0.94
LIG3-213ENST00000590630 DPF1Q92782 380 aa9.21□□□□□ -0.94
LIG3-213ENST00000590630 SEC22AQ96IW7 307 aa9.21□□□□□ -0.94
LIG3-213ENST00000590630 SCGB3A2Q96PL1 93 aa9.21□□□□□ -0.94
LIG3-213ENST00000590630 TP53RKQ96S44 253 aa9.21□□□□□ -0.94
LIG3-213ENST00000590630 RTBDNQ9BSG5 229 aaPredicted RBP9.21□□□□□ -0.94
LIG3-213ENST00000590630 QTRT1Q9BXR0 403 aaKnown RBP9.21□□□□□ -0.94
LIG3-213ENST00000590630 C5orf66Q9H5L9 145 aa9.21□□□□□ -0.94
LIG3-213ENST00000590630 FKBP11Q9NYL4 201 aa9.21□□□□□ -0.94
LIG3-213ENST00000590630 PRNDQ9UKY0 176 aa9.21□□□□□ -0.94
LIG3-213ENST00000590630 GPR132Q9UNW8 380 aa9.21□□□□□ -0.94
LIG3-213ENST00000590630 TRBV9A0A0B4J1U6 114 aa9.2□□□□□ -0.94
LIG3-213ENST00000590630 CGB1A6NKQ9 187 aa9.2□□□□□ -0.94
LIG3-213ENST00000590630 LINC01619G3V211 115 aa9.2□□□□□ -0.94
LIG3-213ENST00000590630 IGKV1-39P01597 117 aa9.2□□□□□ -0.94
LIG3-213ENST00000590630 IGHV3-11P01762 117 aa9.2□□□□□ -0.94
LIG3-213ENST00000590630 IGKV1D-39P04432 117 aa9.2□□□□□ -0.94
LIG3-213ENST00000590630 HSPB1P04792 205 aaKnown RBP9.2□□□□□ -0.94
LIG3-213ENST00000590630 CRYGCP07315 174 aa9.2□□□□□ -0.94
LIG3-213ENST00000590630 MYOD1P15172 320 aa9.2□□□□□ -0.94
LIG3-213ENST00000590630 AREGP15514 252 aa9.2□□□□□ -0.94
LIG3-213ENST00000590630 UCP1P25874 307 aa9.2□□□□□ -0.94
LIG3-213ENST00000590630 PSMB6P28072 239 aa9.2□□□□□ -0.94
LIG3-213ENST00000590630 RHOGP84095 191 aa9.2□□□□□ -0.94
LIG3-213ENST00000590630 DEFA6Q01524 100 aa9.2□□□□□ -0.94
LIG3-213ENST00000590630 BEAN1Q3B7T3 259 aa9.2□□□□□ -0.94
LIG3-213ENST00000590630 H2BFWTQ7Z2G1 175 aa9.2□□□□□ -0.94
LIG3-213ENST00000590630 HSD17B13Q7Z5P4 300 aaPredicted RBP9.2□□□□□ -0.94
LIG3-213ENST00000590630 NECAP1Q8NC96 275 aa9.2□□□□□ -0.94
LIG3-213ENST00000590630 OR1L8Q8NGR8 309 aa9.2□□□□□ -0.94
LIG3-213ENST00000590630 OR5B3Q8NH48 314 aa9.2□□□□□ -0.94
LIG3-213ENST00000590630 ALX4Q9H161 411 aaPredicted RBP9.2□□□□□ -0.94
LIG3-213ENST00000590630 TMEM14BQ9NUH8 114 aa9.2□□□□□ -0.94
LIG3-213ENST00000590630 TEX13DA0A0J9YY54 714 aaPredicted RBP9.19□□□□□ -0.94
LIG3-213ENST00000590630 IGLC7A0M8Q6 106 aa9.19□□□□□ -0.94
LIG3-213ENST00000590630 CRYM-AS1A6NIL9 109 aa9.19□□□□□ -0.94
LIG3-213ENST00000590630 C15orf61A6NNL5 157 aa9.19□□□□□ -0.94
LIG3-213ENST00000590630 PRH1P02810 166 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms