RNA–Protein interactions for RNA: ENST00000590506.1

NEDD4L-229, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-229ENST00000590506 ZNF816Q0VGE8 651 aaPredicted RBP6.44□□□□□ -1.38
NEDD4L-229ENST00000590506 SRSF7Q16629 238 aaKnown RBP eCLIP6.44□□□□□ -1.38
NEDD4L-229ENST00000590506 TMEM249Q2WGJ8 235 aa6.44□□□□□ -1.38
NEDD4L-229ENST00000590506 RNFT1Q5M7Z0 435 aa6.44□□□□□ -1.38
NEDD4L-229ENST00000590506 TMEM240Q5SV17 173 aa6.44□□□□□ -1.38
NEDD4L-229ENST00000590506 SPATA31B1PQ5VZV4 182 aa6.44□□□□□ -1.38
NEDD4L-229ENST00000590506 SHISA6Q6ZSJ9 500 aa6.44□□□□□ -1.38
NEDD4L-229ENST00000590506 SLC22A18ASQ8N1D0 253 aa6.44□□□□□ -1.38
NEDD4L-229ENST00000590506 ZNF441Q8N8Z8 693 aa6.44□□□□□ -1.38
NEDD4L-229ENST00000590506 PERPQ96FX8 193 aa6.44□□□□□ -1.38
NEDD4L-229ENST00000590506 NPFFR1Q9GZQ6 430 aa6.44□□□□□ -1.38
NEDD4L-229ENST00000590506 LIN7CQ9NUP9 197 aaKnown RBP6.44□□□□□ -1.38
NEDD4L-229ENST00000590506 CHD7Q9P2D1 2997 aa6.44□□□□□ -1.38
NEDD4L-229ENST00000590506 A0A1W2PQF6 199 aa6.43□□□□□ -1.38
NEDD4L-229ENST00000590506 C9orf118A6NHY6 69 aa6.43□□□□□ -1.38
NEDD4L-229ENST00000590506 SYS1-DBNDD2H3BUS1 97 aa6.43□□□□□ -1.38
NEDD4L-229ENST00000590506 CDIPTO14735 213 aa6.43□□□□□ -1.38
NEDD4L-229ENST00000590506 RHBDL1O75783 438 aa6.43□□□□□ -1.38
NEDD4L-229ENST00000590506 SRFP11831 508 aa6.43□□□□□ -1.38
NEDD4L-229ENST00000590506 EN2P19622 333 aaPredicted RBP6.43□□□□□ -1.38
NEDD4L-229ENST00000590506 GCHFRP30047 84 aa6.43□□□□□ -1.38
NEDD4L-229ENST00000590506 MC5RP33032 325 aa6.43□□□□□ -1.38
NEDD4L-229ENST00000590506 VWC2Q2TAL6 325 aa6.43□□□□□ -1.38
NEDD4L-229ENST00000590506 FAM120AOSQ5T036 256 aa6.43□□□□□ -1.38
NEDD4L-229ENST00000590506 GDF5OSQ5U4N7 250 aa6.43□□□□□ -1.38
NEDD4L-229ENST00000590506 RHBDD2Q6NTF9 364 aa6.43□□□□□ -1.38
NEDD4L-229ENST00000590506 ZNF48Q96MX3 618 aaPredicted RBP6.43□□□□□ -1.38
NEDD4L-229ENST00000590506 SSBP4Q9BWG4 385 aaPredicted RBP6.43□□□□□ -1.38
NEDD4L-229ENST00000590506 SSBP3Q9BWW4 388 aaPredicted RBP6.43□□□□□ -1.38
NEDD4L-229ENST00000590506 KLRF1Q9NZS2 232 aa6.43□□□□□ -1.38
NEDD4L-229ENST00000590506 HILPDAQ9Y5L2 63 aa6.43□□□□□ -1.38
NEDD4L-229ENST00000590506 IGHV5-51A0A0C4DH38 117 aa6.43□□□□□ -1.38
NEDD4L-229ENST00000590506 IZUMO1RA6ND01 250 aa6.43□□□□□ -1.38
NEDD4L-229ENST00000590506 TRAPPC2LH3BP13 241 aa6.43□□□□□ -1.38
NEDD4L-229ENST00000590506 ZNHIT1O43257 154 aa6.43□□□□□ -1.38
NEDD4L-229ENST00000590506 DHHO43323 396 aa6.43□□□□□ -1.38
NEDD4L-229ENST00000590506 RBMXL2O75526 392 aaKnown RBP6.43□□□□□ -1.38
NEDD4L-229ENST00000590506 CGAP01215 116 aa6.43□□□□□ -1.38
NEDD4L-229ENST00000590506 FBLP22087 321 aaKnown RBP6.43□□□□□ -1.38
NEDD4L-229ENST00000590506 CRYGSP22914 178 aa6.43□□□□□ -1.38
NEDD4L-229ENST00000590506 GFERP55789 205 aa6.43□□□□□ -1.38
NEDD4L-229ENST00000590506 YPEL5P62699 121 aa6.43□□□□□ -1.38
NEDD4L-229ENST00000590506 RAB30Q15771 203 aa6.43□□□□□ -1.38
NEDD4L-229ENST00000590506 TMEM97Q5BJF2 176 aa6.43□□□□□ -1.38
NEDD4L-229ENST00000590506 PET117Q6UWS5 81 aa6.43□□□□□ -1.38
NEDD4L-229ENST00000590506 OR2K2Q8NGT1 345 aa6.43□□□□□ -1.38
NEDD4L-229ENST00000590506 OR10AG1Q8NH19 301 aa6.43□□□□□ -1.38
NEDD4L-229ENST00000590506 RAB37Q96AX2 223 aa6.43□□□□□ -1.38
NEDD4L-229ENST00000590506 URB1-AS1Q96HZ7 61 aa6.43□□□□□ -1.38
NEDD4L-229ENST00000590506 PMCHL2Q9BQD1 86 aa6.43□□□□□ -1.38
NEDD4L-229ENST00000590506 PSG11Q9UQ72 335 aa6.43□□□□□ -1.38
NEDD4L-229ENST00000590506 WDR83OSQ9Y284 106 aa6.43□□□□□ -1.38
NEDD4L-229ENST00000590506 LY96Q9Y6Y9 160 aa6.43□□□□□ -1.38
NEDD4L-229ENST00000590506 F5P12259 2224 aa6.43□□□□□ -1.38
NEDD4L-229ENST00000590506 TEX48A0A1B0GUV7 120 aa6.42□□□□□ -1.38
NEDD4L-229ENST00000590506 HELTA6NFD8 242 aa6.42□□□□□ -1.38
NEDD4L-229ENST00000590506 LRRC30A6NM36 301 aa6.42□□□□□ -1.38
NEDD4L-229ENST00000590506 ZNF207O43670 478 aaKnown RBP6.42□□□□□ -1.38
NEDD4L-229ENST00000590506 AGFG2O95081 481 aa6.42□□□□□ -1.38
NEDD4L-229ENST00000590506 CD1BP29016 333 aa6.42□□□□□ -1.38
NEDD4L-229ENST00000590506 VEGFBP49765 207 aa6.42□□□□□ -1.38
NEDD4L-229ENST00000590506 FABP6P51161 128 aa6.42□□□□□ -1.38
NEDD4L-229ENST00000590506 SLC35E4Q6ICL7 350 aa6.42□□□□□ -1.38
NEDD4L-229ENST00000590506 SLC23A3Q6PIS1 610 aa6.42□□□□□ -1.38
NEDD4L-229ENST00000590506 C2orf91Q6ZV80 131 aa6.42□□□□□ -1.38
NEDD4L-229ENST00000590506 BHLHA15Q7RTS1 189 aaPredicted RBP6.42□□□□□ -1.38
NEDD4L-229ENST00000590506 SSX8Q7RTT4 187 aa6.42□□□□□ -1.38
NEDD4L-229ENST00000590506 FAM168AQ92567 244 aa6.42□□□□□ -1.38
NEDD4L-229ENST00000590506 RPP25Q9BUL9 199 aaKnown RBP6.42□□□□□ -1.38
NEDD4L-229ENST00000590506 OSTCQ9NRP0 149 aa6.42□□□□□ -1.38
NEDD4L-229ENST00000590506 JKAMPQ9P055 326 aa6.42□□□□□ -1.38
NEDD4L-229ENST00000590506 RANBP2P49792 3224 aaKnown RBP6.42□□□□□ -1.38
NEDD4L-229ENST00000590506 COL5A1P20908 1838 aaPredicted RBP6.42□□□□□ -1.38
NEDD4L-229ENST00000590506 CDH23Q9H251 3354 aa6.42□□□□□ -1.38
NEDD4L-229ENST00000590506 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.42□□□□□ -1.38
NEDD4L-229ENST00000590506 hCG_38984A0A1B0GV85 526 aa6.42□□□□□ -1.38
NEDD4L-229ENST00000590506 SMIM27A0A1W2PRY6 76 aa6.42□□□□□ -1.38
NEDD4L-229ENST00000590506 SYNGR3O43761 229 aa6.42□□□□□ -1.38
NEDD4L-229ENST00000590506 OR10J4P0C629 311 aa6.42□□□□□ -1.38
NEDD4L-229ENST00000590506 HIST1H1EP10412 219 aaKnown RBP6.42□□□□□ -1.38
NEDD4L-229ENST00000590506 HSD52Q0P140 79 aa6.42□□□□□ -1.38
NEDD4L-229ENST00000590506 KLF5Q13887 457 aaPredicted RBP6.42□□□□□ -1.38
NEDD4L-229ENST00000590506 PSG3Q16557 428 aa6.42□□□□□ -1.38
NEDD4L-229ENST00000590506 PDLIM3Q53GG5 364 aaPredicted RBP6.42□□□□□ -1.38
NEDD4L-229ENST00000590506 C10orf128Q5T292 105 aa6.42□□□□□ -1.38
NEDD4L-229ENST00000590506 IBA57Q5T440 356 aaKnown RBP6.42□□□□□ -1.38
NEDD4L-229ENST00000590506 WDR74Q6RFH5 385 aaPredicted RBP6.42□□□□□ -1.38
NEDD4L-229ENST00000590506 ZNF788Q6ZQV5 615 aa6.42□□□□□ -1.38
NEDD4L-229ENST00000590506 BPIFA4PQ86YQ2 179 aa6.42□□□□□ -1.38
NEDD4L-229ENST00000590506 TMEM251Q8N6I4 163 aa6.42□□□□□ -1.38
NEDD4L-229ENST00000590506 SSMEM1Q8WWF3 244 aa6.42□□□□□ -1.38
NEDD4L-229ENST00000590506 C11orf52Q96A22 123 aa6.42□□□□□ -1.38
NEDD4L-229ENST00000590506 PHF7Q9BWX1 381 aaPredicted RBP6.42□□□□□ -1.38
NEDD4L-229ENST00000590506 TMEM191AQ9H0A3 160 aa6.42□□□□□ -1.38
NEDD4L-229ENST00000590506 RNF208Q9H0X6 261 aa6.42□□□□□ -1.38
NEDD4L-229ENST00000590506 SAP30LQ9HAJ7 183 aa6.42□□□□□ -1.38
NEDD4L-229ENST00000590506 TSSC4Q9Y5U2 329 aaPredicted RBP6.42□□□□□ -1.38
NEDD4L-229ENST00000590506 A0A0G2JLM5 398 aa6.41□□□□□ -1.38
NEDD4L-229ENST00000590506 A0A0G2JMM0 328 aa6.41□□□□□ -1.38
NEDD4L-229ENST00000590506 A0A1W2PPB8 328 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms