RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 TAS2R31P59538 309 aa8.62□□□□□ -1.03
SMAD4-211ENST00000590499 SRSF3P84103 164 aaKnown RBP8.62□□□□□ -1.03
SMAD4-211ENST00000590499 DEFA5Q01523 94 aa8.62□□□□□ -1.03
SMAD4-211ENST00000590499 ZNF45Q02386 682 aa8.62□□□□□ -1.03
SMAD4-211ENST00000590499 VAX1Q5SQQ9 334 aa8.62□□□□□ -1.03
SMAD4-211ENST00000590499 C9orf66Q5T8R8 295 aa8.62□□□□□ -1.03
SMAD4-211ENST00000590499 AADACL3Q5VUY0 350 aa8.62□□□□□ -1.03
SMAD4-211ENST00000590499 OR4A47Q6IF82 309 aa8.62□□□□□ -1.03
SMAD4-211ENST00000590499 LAX1Q8IWV1 398 aa8.62□□□□□ -1.03
SMAD4-211ENST00000590499 TTC9CQ8N5M4 171 aa8.62□□□□□ -1.03
SMAD4-211ENST00000590499 OR6F1Q8NGZ6 308 aa8.62□□□□□ -1.03
SMAD4-211ENST00000590499 OR51H1Q8NH63 302 aa8.62□□□□□ -1.03
SMAD4-211ENST00000590499 OR52I2Q8NH67 350 aa8.62□□□□□ -1.03
SMAD4-211ENST00000590499 MRAPQ8TCY5 172 aa8.62□□□□□ -1.03
SMAD4-211ENST00000590499 DCUN1D4Q92564 292 aa8.62□□□□□ -1.03
SMAD4-211ENST00000590499 DLX4Q92988 240 aaPredicted RBP8.62□□□□□ -1.03
SMAD4-211ENST00000590499 SPIN2AQ99865 258 aa8.62□□□□□ -1.03
SMAD4-211ENST00000590499 SPIN2BQ9BPZ2 258 aa8.62□□□□□ -1.03
SMAD4-211ENST00000590499 PLEKHA2Q9HB19 425 aa8.62□□□□□ -1.03
SMAD4-211ENST00000590499 KLK11Q9UBX7 282 aa8.62□□□□□ -1.03
SMAD4-211ENST00000590499 MTFP1Q9UDX5 166 aa8.62□□□□□ -1.03
SMAD4-211ENST00000590499 TRBV9A0A0B4J1U6 114 aa8.61□□□□□ -1.03
SMAD4-211ENST00000590499 A0A0G2JLM5 398 aa8.61□□□□□ -1.03
SMAD4-211ENST00000590499 CGB1A6NKQ9 187 aa8.61□□□□□ -1.03
SMAD4-211ENST00000590499 H3BMQ9 156 aa8.61□□□□□ -1.03
SMAD4-211ENST00000590499 GPR31O00270 319 aa8.61□□□□□ -1.03
SMAD4-211ENST00000590499 CTDSP2O14595 271 aa8.61□□□□□ -1.03
SMAD4-211ENST00000590499 OVOL1O14753 267 aa8.61□□□□□ -1.03
SMAD4-211ENST00000590499 ACTL6BO94805 426 aa8.61□□□□□ -1.03
SMAD4-211ENST00000590499 S1PR2O95136 353 aa8.61□□□□□ -1.03
SMAD4-211ENST00000590499 HPRT1P00492 218 aa8.61□□□□□ -1.03
SMAD4-211ENST00000590499 RLN1P04808 185 aa8.61□□□□□ -1.03
SMAD4-211ENST00000590499 FGF2P09038 288 aa8.61□□□□□ -1.03
SMAD4-211ENST00000590499 ZNF735P0CB33 412 aa8.61□□□□□ -1.03
SMAD4-211ENST00000590499 MAS1LP35410 378 aa8.61□□□□□ -1.03
SMAD4-211ENST00000590499 RPL8P62917 257 aaKnown RBP8.61□□□□□ -1.03
SMAD4-211ENST00000590499 KIR3DS1Q14943 382 aa8.61□□□□□ -1.03
SMAD4-211ENST00000590499 SSX9Q7RTT3 188 aa8.61□□□□□ -1.03
SMAD4-211ENST00000590499 OR4A5Q8NH83 315 aa8.61□□□□□ -1.03
SMAD4-211ENST00000590499 CD300LFQ8TDQ1 290 aa8.61□□□□□ -1.03
SMAD4-211ENST00000590499 ISOC1Q96CN7 298 aa8.61□□□□□ -1.03
SMAD4-211ENST00000590499 PHB2Q99623 299 aa8.61□□□□□ -1.03
SMAD4-211ENST00000590499 ZNF355PQ9NSJ1 428 aa8.61□□□□□ -1.03
SMAD4-211ENST00000590499 COA4Q9NYJ1 87 aa8.61□□□□□ -1.03
SMAD4-211ENST00000590499 PRR13Q9NZ81 148 aa8.61□□□□□ -1.03
SMAD4-211ENST00000590499 COMMD9Q9P000 198 aa8.61□□□□□ -1.03
SMAD4-211ENST00000590499 C13orf42A0A1B0GVH6 325 aa8.6□□□□□ -1.03
SMAD4-211ENST00000590499 HMX3A6NHT5 357 aa8.6□□□□□ -1.03
SMAD4-211ENST00000590499 M0QYG6 137 aa8.6□□□□□ -1.03
SMAD4-211ENST00000590499 PRH1P02810 166 aa8.6□□□□□ -1.03
SMAD4-211ENST00000590499 MYOD1P15172 320 aa8.6□□□□□ -1.03
SMAD4-211ENST00000590499 NQO2P16083 231 aa8.6□□□□□ -1.03
SMAD4-211ENST00000590499 HLA-GP17693 338 aa8.6□□□□□ -1.03
SMAD4-211ENST00000590499 F2RP25116 425 aa8.6□□□□□ -1.03
SMAD4-211ENST00000590499 RPL27AP46776 148 aaKnown RBP8.6□□□□□ -1.03
SMAD4-211ENST00000590499 UCP3P55916 312 aa8.6□□□□□ -1.03
SMAD4-211ENST00000590499 DGCR2P98153 550 aa8.6□□□□□ -1.03
SMAD4-211ENST00000590499 KLK9Q2XQG4 91 aa8.6□□□□□ -1.03
SMAD4-211ENST00000590499 ZNF585BQ52M93 769 aa8.6□□□□□ -1.03
SMAD4-211ENST00000590499 RNASE12Q5GAN4 147 aaKnown RBP8.6□□□□□ -1.03
SMAD4-211ENST00000590499 ZNF343Q6P1L6 599 aa8.6□□□□□ -1.03
SMAD4-211ENST00000590499 LHFPL1Q86WI0 220 aa8.6□□□□□ -1.03
SMAD4-211ENST00000590499 CMTM1Q8IZ96 169 aa8.6□□□□□ -1.03
SMAD4-211ENST00000590499 C15orf40Q8WUR7 153 aa8.6□□□□□ -1.03
SMAD4-211ENST00000590499 DGCR14Q96DF8 476 aaKnown RBP8.6□□□□□ -1.03
SMAD4-211ENST00000590499 USMG5Q96IX5 58 aa8.6□□□□□ -1.03
SMAD4-211ENST00000590499 AIFM2Q9BRQ8 373 aa8.6□□□□□ -1.03
SMAD4-211ENST00000590499 SLIRPQ9GZT3 109 aaKnown RBP8.6□□□□□ -1.03
SMAD4-211ENST00000590499 AP5S1Q9NUS5 200 aa8.6□□□□□ -1.03
SMAD4-211ENST00000590499 KLK9Q9UKQ9 250 aa8.6□□□□□ -1.03
SMAD4-211ENST00000590499 TRAV3A0A0B4J244 114 aa8.59□□□□□ -1.03
SMAD4-211ENST00000590499 FAM223BA6NKX1 122 aa8.59□□□□□ -1.03
SMAD4-211ENST00000590499 NPIPB5A8MRT5 1133 aa8.59□□□□□ -1.03
SMAD4-211ENST00000590499 GABARAPH6UMI1 98 aa8.59□□□□□ -1.03
SMAD4-211ENST00000590499 UPK2O00526 184 aa8.59□□□□□ -1.03
SMAD4-211ENST00000590499 MPPED1O15442 326 aa8.59□□□□□ -1.03
SMAD4-211ENST00000590499 RGS5O15539 181 aa8.59□□□□□ -1.03
SMAD4-211ENST00000590499 TRBV12-3P01733 135 aa8.59□□□□□ -1.03
SMAD4-211ENST00000590499 CD74P04233 296 aa8.59□□□□□ -1.03
SMAD4-211ENST00000590499 CD3DP04234 171 aa8.59□□□□□ -1.03
SMAD4-211ENST00000590499 CRYGCP07315 174 aa8.59□□□□□ -1.03
SMAD4-211ENST00000590499 AREGP15514 252 aa8.59□□□□□ -1.03
SMAD4-211ENST00000590499 TBPP20226 339 aa8.59□□□□□ -1.03
SMAD4-211ENST00000590499 INSL3P51460 131 aa8.59□□□□□ -1.03
SMAD4-211ENST00000590499 OR2B8PP59922 312 aa8.59□□□□□ -1.03
SMAD4-211ENST00000590499 TSPAN5P62079 268 aa8.59□□□□□ -1.03
SMAD4-211ENST00000590499 RHOGP84095 191 aa8.59□□□□□ -1.03
SMAD4-211ENST00000590499 ACSM6Q6P461 480 aa8.59□□□□□ -1.03
SMAD4-211ENST00000590499 C19orf35Q6ZS72 473 aa8.59□□□□□ -1.03
SMAD4-211ENST00000590499 FAM223AQ8IWN6 122 aa8.59□□□□□ -1.03
SMAD4-211ENST00000590499 CADM3Q8N126 398 aa8.59□□□□□ -1.03
SMAD4-211ENST00000590499 FCAMRQ8WWV6 532 aa8.59□□□□□ -1.03
SMAD4-211ENST00000590499 RANGRFQ9HD47 186 aaPredicted RBP8.59□□□□□ -1.03
SMAD4-211ENST00000590499 AKIP1Q9NQ31 210 aa8.59□□□□□ -1.03
SMAD4-211ENST00000590499 SLC2A9Q9NRM0 540 aa8.59□□□□□ -1.03
SMAD4-211ENST00000590499 FAM212BQ9NTI7 297 aaPredicted RBP8.59□□□□□ -1.03
SMAD4-211ENST00000590499 TMEM140Q9NV12 185 aa8.59□□□□□ -1.03
SMAD4-211ENST00000590499 ZMAT5Q9UDW3 170 aaKnown RBP8.59□□□□□ -1.03
SMAD4-211ENST00000590499 ZNF257Q9Y2Q1 563 aa8.59□□□□□ -1.03
SMAD4-211ENST00000590499 CEPT1Q9Y6K0 416 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms