RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 SLC25A10Q9UBX3 287 aaPredicted RBP12.41□□□□□ -0.42
SMARCA4-214ENST00000589677 SCN3AQ9NY46 2000 aa12.41□□□□□ -0.42
SMARCA4-214ENST00000589677 LYL1P12980 280 aa12.41□□□□□ -0.42
SMARCA4-214ENST00000589677 TEX38Q6PEX7 206 aa12.41□□□□□ -0.42
SMARCA4-214ENST00000589677 OR4A5Q8NH83 315 aa12.41□□□□□ -0.42
SMARCA4-214ENST00000589677 ZNF501Q96CX3 271 aaPredicted RBP12.41□□□□□ -0.42
SMARCA4-214ENST00000589677 FMC1Q96HJ9 113 aa12.41□□□□□ -0.42
SMARCA4-214ENST00000589677 HILPDAQ9Y5L2 63 aa12.41□□□□□ -0.42
SMARCA4-214ENST00000589677 REG1BP48304 166 aa12.4□□□□□ -0.42
SMARCA4-214ENST00000589677 SMAGPQ0VAQ4 97 aa12.4□□□□□ -0.42
SMARCA4-214ENST00000589677 KHDC1LQ5JSQ8 128 aa12.4□□□□□ -0.42
SMARCA4-214ENST00000589677 AGMATQ9BSE5 352 aa12.4□□□□□ -0.42
SMARCA4-214ENST00000589677 TNS1Q9HBL0 1735 aaKnown RBP12.4□□□□□ -0.42
SMARCA4-214ENST00000589677 TRPM6Q9BX84 2022 aa12.4□□□□□ -0.42
SMARCA4-214ENST00000589677 GPR6P46095 362 aaPredicted RBP12.4□□□□□ -0.42
SMARCA4-214ENST00000589677 MBNL2Q5VZF2 373 aaKnown RBP12.4□□□□□ -0.42
SMARCA4-214ENST00000589677 GOLT1AQ6ZVE7 132 aa12.4□□□□□ -0.42
SMARCA4-214ENST00000589677 TMEM262E9PQX1 116 aa12.4□□□□□ -0.42
SMARCA4-214ENST00000589677 APELAP0DMC3 54 aa12.4□□□□□ -0.42
SMARCA4-214ENST00000589677 OR5P3Q8WZ94 311 aa12.4□□□□□ -0.42
SMARCA4-214ENST00000589677 ANAPC13Q9BS18 74 aa12.4□□□□□ -0.42
SMARCA4-214ENST00000589677 MS4A5Q9H3V2 200 aa12.4□□□□□ -0.42
SMARCA4-214ENST00000589677 PROB1E7EW31 1015 aa12.4□□□□□ -0.43
SMARCA4-214ENST00000589677 J3KRW8 73 aa12.4□□□□□ -0.43
SMARCA4-214ENST00000589677 HSD52Q0P140 79 aa12.4□□□□□ -0.43
SMARCA4-214ENST00000589677 TEX29Q8N6K0 151 aa12.4□□□□□ -0.43
SMARCA4-214ENST00000589677 IDI2-AS1Q9NZ38 188 aa12.4□□□□□ -0.43
SMARCA4-214ENST00000589677 PRR32B1ATL7 298 aa12.39□□□□□ -0.43
SMARCA4-214ENST00000589677 CT55Q8WUE5 264 aa12.39□□□□□ -0.43
SMARCA4-214ENST00000589677 SGK494Q96LW2 274 aa12.39□□□□□ -0.43
SMARCA4-214ENST00000589677 SH2D7A6NKC9 451 aaPredicted RBP12.39□□□□□ -0.43
SMARCA4-214ENST00000589677 EREGO14944 169 aa12.39□□□□□ -0.43
SMARCA4-214ENST00000589677 C3AR1Q16581 482 aa12.39□□□□□ -0.43
SMARCA4-214ENST00000589677 AICDAQ9GZX7 198 aa12.39□□□□□ -0.43
SMARCA4-214ENST00000589677 hCG_38984A0A1B0GV85 526 aa12.39□□□□□ -0.43
SMARCA4-214ENST00000589677 HIGD1CA8MV81 97 aa12.39□□□□□ -0.43
SMARCA4-214ENST00000589677 RNASEH2CQ8TDP1 164 aaKnown RBP12.39□□□□□ -0.43
SMARCA4-214ENST00000589677 HCP5Q6MZN7 132 aa12.39□□□□□ -0.43
SMARCA4-214ENST00000589677 LINC00305Q7Z4B0 112 aa12.39□□□□□ -0.43
SMARCA4-214ENST00000589677 OCC1Q8TAD7 63 aa12.39□□□□□ -0.43
SMARCA4-214ENST00000589677 SP7Q8TDD2 431 aaPredicted RBP12.39□□□□□ -0.43
SMARCA4-214ENST00000589677 ZIC3O60481 467 aa12.38□□□□□ -0.43
SMARCA4-214ENST00000589677 IGKV3-11P04433 115 aa12.38□□□□□ -0.43
SMARCA4-214ENST00000589677 PRSS2P07478 247 aa12.38□□□□□ -0.43
SMARCA4-214ENST00000589677 NPIPB3Q92617 1050 aa12.38□□□□□ -0.43
SMARCA4-214ENST00000589677 RAB1CQ92928 201 aa12.38□□□□□ -0.43
SMARCA4-214ENST00000589677 J3QW42 95 aa12.38□□□□□ -0.43
SMARCA4-214ENST00000589677 NAPSAO96009 420 aa12.38□□□□□ -0.43
SMARCA4-214ENST00000589677 SUPT4H1P63272 117 aaKnown RBP12.38□□□□□ -0.43
SMARCA4-214ENST00000589677 UNQ5815/PRO19632Q6UWF5 114 aa12.38□□□□□ -0.43
SMARCA4-214ENST00000589677 IFI27L2Q9H2X8 130 aa12.38□□□□□ -0.43
SMARCA4-214ENST00000589677 ASCC3Q8N3C0 2202 aaKnown RBP12.38□□□□□ -0.43
SMARCA4-214ENST00000589677 TRBV20OR9-2A0A075B6H5 130 aa12.38□□□□□ -0.43
SMARCA4-214ENST00000589677 CRXO43186 299 aaPredicted RBP12.38□□□□□ -0.43
SMARCA4-214ENST00000589677 NBEAP1P0C6P0 100 aa12.38□□□□□ -0.43
SMARCA4-214ENST00000589677 CCL1P22362 96 aa12.38□□□□□ -0.43
SMARCA4-214ENST00000589677 MAJINQ3KP22 176 aa12.38□□□□□ -0.43
SMARCA4-214ENST00000589677 TM4SF20Q53R12 229 aa12.38□□□□□ -0.43
SMARCA4-214ENST00000589677 SEMA5BQ9P283 1151 aa12.38□□□□□ -0.43
SMARCA4-214ENST00000589677 PPIHO43447 177 aaKnown RBP12.38□□□□□ -0.43
SMARCA4-214ENST00000589677 IGFBP2P18065 325 aa12.38□□□□□ -0.43
SMARCA4-214ENST00000589677 SCARF2Q96GP6 870 aaPredicted RBP12.38□□□□□ -0.43
SMARCA4-214ENST00000589677 RAXQ9Y2V3 346 aa12.38□□□□□ -0.43
SMARCA4-214ENST00000589677 IGKV1D-43A0A0B4J1Z2 117 aa12.37□□□□□ -0.43
SMARCA4-214ENST00000589677 TMUB1Q9BVT8 246 aa12.37□□□□□ -0.43
SMARCA4-214ENST00000589677 RNASE7Q9H1E1 156 aaKnown RBP12.37□□□□□ -0.43
SMARCA4-214ENST00000589677 IGHV1-69-2A0A0G2JMI3 117 aa12.37□□□□□ -0.43
SMARCA4-214ENST00000589677 CX3CL1P78423 397 aa12.37□□□□□ -0.43
SMARCA4-214ENST00000589677 CIRBPQ14011 172 aaKnown RBP12.37□□□□□ -0.43
SMARCA4-214ENST00000589677 FAM53AQ6NSI3 398 aaPredicted RBP12.37□□□□□ -0.43
SMARCA4-214ENST00000589677 ORMDL3Q8N138 153 aa12.37□□□□□ -0.43
SMARCA4-214ENST00000589677 NCOR1P1Q9H4R4 102 aa12.37□□□□□ -0.43
SMARCA4-214ENST00000589677 ZNF703Q9H7S9 590 aaPredicted RBP12.37□□□□□ -0.43
SMARCA4-214ENST00000589677 A0A087WV48 116 aa12.37□□□□□ -0.43
SMARCA4-214ENST00000589677 A0A1W2PQF6 199 aa12.37□□□□□ -0.43
SMARCA4-214ENST00000589677 FCGR2BP31994 310 aaPredicted RBP12.37□□□□□ -0.43
SMARCA4-214ENST00000589677 TIMP3P35625 211 aa12.37□□□□□ -0.43
SMARCA4-214ENST00000589677 ZNF826PQ6ZT77 177 aa12.37□□□□□ -0.43
SMARCA4-214ENST00000589677 VKORC1L1Q8N0U8 176 aa12.37□□□□□ -0.43
SMARCA4-214ENST00000589677 OR9G4Q8NGQ1 327 aa12.37□□□□□ -0.43
SMARCA4-214ENST00000589677 C18orf15Q96N68 181 aa12.37□□□□□ -0.43
SMARCA4-214ENST00000589677 SSBP4Q9BWG4 385 aaPredicted RBP12.37□□□□□ -0.43
SMARCA4-214ENST00000589677 RAB1BQ9H0U4 201 aa12.37□□□□□ -0.43
SMARCA4-214ENST00000589677 GREB1LQ9C091 1923 aaPredicted RBP12.36□□□□□ -0.43
SMARCA4-214ENST00000589677 KNL1Q8NG31 2342 aa12.36□□□□□ -0.43
SMARCA4-214ENST00000589677 IGHV5-10-1A0A0J9YXX1 117 aa12.36□□□□□ -0.43
SMARCA4-214ENST00000589677 MIR17HGQ75NE6 70 aa12.36□□□□□ -0.43
SMARCA4-214ENST00000589677 GPR82Q96P67 336 aa12.36□□□□□ -0.43
SMARCA4-214ENST00000589677 R4GN57 208 aa12.36□□□□□ -0.43
SMARCA4-214ENST00000589677 TYMSP04818 313 aa12.36□□□□□ -0.43
SMARCA4-214ENST00000589677 ID1P41134 155 aa12.36□□□□□ -0.43
SMARCA4-214ENST00000589677 C10orf91Q5T1B1 145 aa12.36□□□□□ -0.43
SMARCA4-214ENST00000589677 FOXC2Q99958 501 aa12.36□□□□□ -0.43
SMARCA4-214ENST00000589677 C20orf144Q9BQM9 153 aa12.36□□□□□ -0.43
SMARCA4-214ENST00000589677 COL11A1P12107 1806 aaPredicted RBP12.36□□□□□ -0.43
SMARCA4-214ENST00000589677 PPIAL4EA0A075B759 164 aa12.36□□□□□ -0.43
SMARCA4-214ENST00000589677 TMEM50AO95807 157 aa12.36□□□□□ -0.43
SMARCA4-214ENST00000589677 PPIAL4FP0DN26 164 aa12.36□□□□□ -0.43
SMARCA4-214ENST00000589677 CCDC144NLQ6NUI1 221 aa12.36□□□□□ -0.43
SMARCA4-214ENST00000589677 ATP5L2Q7Z4Y8 100 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms