RNA–Protein interactions for RNA: ENST00000589285.1

ZNF540-207, Transcript of zinc finger protein 540, humanhuman

Gene ZNF540, Length 3,106 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-207ENST00000589285 QRFPP83859 136 aa2.63□□□□□ -1.99
ZNF540-207ENST00000589285 ZNF816Q0VGE8 651 aaPredicted RBP2.63□□□□□ -1.99
ZNF540-207ENST00000589285 HES1Q14469 280 aa2.63□□□□□ -1.99
ZNF540-207ENST00000589285 LY6EQ16553 131 aa2.63□□□□□ -1.99
ZNF540-207ENST00000589285 FBXL19-AS1Q494R0 122 aa2.63□□□□□ -1.99
ZNF540-207ENST00000589285 RPL39P5Q59GN2 51 aa2.63□□□□□ -1.99
ZNF540-207ENST00000589285 C9orf152Q5JTZ5 239 aa2.63□□□□□ -1.99
ZNF540-207ENST00000589285 CLLU1Q5K131 121 aa2.63□□□□□ -1.99
ZNF540-207ENST00000589285 FAM166AQ6J272 317 aa2.63□□□□□ -1.99
ZNF540-207ENST00000589285 PLET1Q6UQ28 207 aa2.63□□□□□ -1.99
ZNF540-207ENST00000589285 NUP37Q8NFH4 326 aa2.63□□□□□ -1.99
ZNF540-207ENST00000589285 OR5H2Q8NGV7 314 aa2.63□□□□□ -1.99
ZNF540-207ENST00000589285 TIMD4Q96H15 378 aa2.63□□□□□ -1.99
ZNF540-207ENST00000589285 SUCNR1Q9BXA5 334 aa2.63□□□□□ -1.99
ZNF540-207ENST00000589285 GSKIPQ9P0R6 139 aa2.63□□□□□ -1.99
ZNF540-207ENST00000589285 COPZ2Q9P299 210 aa2.63□□□□□ -1.99
ZNF540-207ENST00000589285 LINC00527Q9UJ94 153 aa2.63□□□□□ -1.99
ZNF540-207ENST00000589285 SELENOKQ9Y6D0 94 aa2.63□□□□□ -1.99
ZNF540-207ENST00000589285 TRAV38-1A0A0B4J264 116 aa2.63□□□□□ -1.99
ZNF540-207ENST00000589285 TRAV40A0A0B4J280 105 aa2.63□□□□□ -1.99
ZNF540-207ENST00000589285 MDFIC2A0A1B0GVS7 189 aa2.63□□□□□ -1.99
ZNF540-207ENST00000589285 A0A1W2PRV1 198 aa2.63□□□□□ -1.99
ZNF540-207ENST00000589285 SSNA1O43805 119 aa2.63□□□□□ -1.99
ZNF540-207ENST00000589285 OR2F2O95006 317 aa2.63□□□□□ -1.99
ZNF540-207ENST00000589285 HBZP02008 142 aa2.63□□□□□ -1.99
ZNF540-207ENST00000589285 FCGR3AP08637 254 aa2.63□□□□□ -1.99
ZNF540-207ENST00000589285 RRASP10301 218 aa2.63□□□□□ -1.99
ZNF540-207ENST00000589285 UBE2G2P60604 165 aa2.63□□□□□ -1.99
ZNF540-207ENST00000589285 KRTAP27-1Q3LI81 207 aa2.63□□□□□ -1.99
ZNF540-207ENST00000589285 HACD4Q5VWC8 232 aa2.63□□□□□ -1.99
ZNF540-207ENST00000589285 GSG1LQ6UXU4 331 aa2.63□□□□□ -1.99
ZNF540-207ENST00000589285 SLC16A13Q7RTY0 426 aa2.63□□□□□ -1.99
ZNF540-207ENST00000589285 SLC36A1Q7Z2H8 476 aa2.63□□□□□ -1.99
ZNF540-207ENST00000589285 LHFPL4Q7Z7J7 247 aa2.63□□□□□ -1.99
ZNF540-207ENST00000589285 S100A7AQ86SG5 101 aa2.63□□□□□ -1.99
ZNF540-207ENST00000589285 TGIF2LXQ8IUE1 241 aa2.63□□□□□ -1.99
ZNF540-207ENST00000589285 C9orf62Q8N4C0 152 aa2.63□□□□□ -1.99
ZNF540-207ENST00000589285 ADAD2Q8NCV1 583 aaKnown RBP2.63□□□□□ -1.99
ZNF540-207ENST00000589285 CLDND2Q8NHS1 167 aa2.63□□□□□ -1.99
ZNF540-207ENST00000589285 CD300LFQ8TDQ1 290 aa2.63□□□□□ -1.99
ZNF540-207ENST00000589285 ACOT12Q8WYK0 555 aa2.63□□□□□ -1.99
ZNF540-207ENST00000589285 RAB1CQ92928 201 aa2.63□□□□□ -1.99
ZNF540-207ENST00000589285 LHX4Q969G2 390 aa2.63□□□□□ -1.99
ZNF540-207ENST00000589285 NARS2Q96I59 477 aaKnown RBP2.63□□□□□ -1.99
ZNF540-207ENST00000589285 PDCD10Q9BUL8 212 aa2.63□□□□□ -1.99
ZNF540-207ENST00000589285 OR2D2Q9H210 308 aa2.63□□□□□ -1.99
ZNF540-207ENST00000589285 HRASLSQ9HDD0 168 aa2.63□□□□□ -1.99
ZNF540-207ENST00000589285 CCL28Q9NRJ3 127 aa2.63□□□□□ -1.99
ZNF540-207ENST00000589285 PUS1Q9Y606 427 aaKnown RBP eCLIP2.63□□□□□ -1.99
ZNF540-207ENST00000589285 NPTNQ9Y639 398 aa2.63□□□□□ -1.99
ZNF540-207ENST00000589285 VWFP04275 2813 aa2.63□□□□□ -1.99
ZNF540-207ENST00000589285 LOC105371242A0A075B767 164 aa2.62□□□□□ -1.99
ZNF540-207ENST00000589285 PPIAL4CA0A0B4J2A2 164 aa2.62□□□□□ -1.99
ZNF540-207ENST00000589285 IGKV1-6A0A0C4DH72 117 aa2.62□□□□□ -1.99
ZNF540-207ENST00000589285 ODAMA1E959 279 aa2.62□□□□□ -1.99
ZNF540-207ENST00000589285 A4D1N5 150 aa2.62□□□□□ -1.99
ZNF540-207ENST00000589285 OR5H14A6NHG9 310 aa2.62□□□□□ -1.99
ZNF540-207ENST00000589285 TMEM238C9JI98 176 aa2.62□□□□□ -1.99
ZNF540-207ENST00000589285 MFNGO00587 321 aa2.62□□□□□ -1.99
ZNF540-207ENST00000589285 FABP7O15540 132 aa2.62□□□□□ -1.99
ZNF540-207ENST00000589285 IGHV3-48P01763 117 aa2.62□□□□□ -1.99
ZNF540-207ENST00000589285 MELTFP08582 738 aa2.62□□□□□ -1.99
ZNF540-207ENST00000589285 PPIAL4GP0DN37 164 aa2.62□□□□□ -1.99
ZNF540-207ENST00000589285 PRB4P10163 310 aaPredicted RBP2.62□□□□□ -1.99
ZNF540-207ENST00000589285 AADACP22760 399 aa2.62□□□□□ -1.99
ZNF540-207ENST00000589285 DEFA5Q01523 94 aa2.62□□□□□ -1.99
ZNF540-207ENST00000589285 HERPUD1Q15011 391 aa2.62□□□□□ -1.99
ZNF540-207ENST00000589285 ABCA11PQ4W5N1 156 aa2.62□□□□□ -1.99
ZNF540-207ENST00000589285 LRRC10Q5BKY1 277 aa2.62□□□□□ -1.99
ZNF540-207ENST00000589285 GFI1BQ5VTD9 330 aa2.62□□□□□ -1.99
ZNF540-207ENST00000589285 TEX261Q6UWH6 196 aa2.62□□□□□ -1.99
ZNF540-207ENST00000589285 RBMS3Q6XE24 437 aaKnown RBP2.62□□□□□ -1.99
ZNF540-207ENST00000589285 TRPT1Q86TN4 253 aaKnown RBP2.62□□□□□ -1.99
ZNF540-207ENST00000589285 LYPD6Q86Y78 171 aa2.62□□□□□ -1.99
ZNF540-207ENST00000589285 HAVCR2Q8TDQ0 301 aa2.62□□□□□ -1.99
ZNF540-207ENST00000589285 SMIM4Q8WVI0 70 aa2.62□□□□□ -1.99
ZNF540-207ENST00000589285 PHYHIPQ92561 330 aa2.62□□□□□ -1.99
ZNF540-207ENST00000589285 UPRTQ96BW1 309 aa2.62□□□□□ -1.99
ZNF540-207ENST00000589285 CPNE2Q96FN4 548 aaPredicted RBP2.62□□□□□ -1.99
ZNF540-207ENST00000589285 GAFA1Q96PS6 74 aa2.62□□□□□ -1.99
ZNF540-207ENST00000589285 ZNF665Q9H7R5 613 aa2.62□□□□□ -1.99
ZNF540-207ENST00000589285 RDH8Q9NYR8 311 aa2.62□□□□□ -1.99
ZNF540-207ENST00000589285 KCNIP1Q9NZI2 227 aa2.62□□□□□ -1.99
ZNF540-207ENST00000589285 ZNF222Q9UK12 451 aa2.62□□□□□ -1.99
ZNF540-207ENST00000589285 GOLT1BQ9Y3E0 138 aa2.62□□□□□ -1.99
ZNF540-207ENST00000589285 U3KQ87 197 aa2.62□□□□□ -1.99
ZNF540-207ENST00000589285 NKX6-3A6NJ46 265 aa2.62□□□□□ -1.99
ZNF540-207ENST00000589285 MPTX1A8MV57 137 aa2.62□□□□□ -1.99
ZNF540-207ENST00000589285 H3BP45 60 aa2.62□□□□□ -1.99
ZNF540-207ENST00000589285 LGALS8O00214 317 aa2.62□□□□□ -1.99
ZNF540-207ENST00000589285 SULT1C2O00338 296 aa2.62□□□□□ -1.99
ZNF540-207ENST00000589285 ADAP1O75689 374 aa2.62□□□□□ -1.99
ZNF540-207ENST00000589285 KRASP01116 189 aa2.62□□□□□ -1.99
ZNF540-207ENST00000589285 HLA-AP01891 365 aaKnown RBP2.62□□□□□ -1.99
ZNF540-207ENST00000589285 MPZP25189 248 aa2.62□□□□□ -1.99
ZNF540-207ENST00000589285 EFNA4P52798 201 aa2.62□□□□□ -1.99
ZNF540-207ENST00000589285 HERV-K104P61576 105 aa2.62□□□□□ -1.99
ZNF540-207ENST00000589285 Q6P435 159 aa2.62□□□□□ -1.99
ZNF540-207ENST00000589285 OR11H4Q8NGC9 324 aa2.62□□□□□ -1.99
ZNF540-207ENST00000589285 MRPL30Q8TCC3 161 aaKnown RBP2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms