RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 SNRNP70P08621 437 aaKnown RBP8.15□□□□□ -1.1
VPS25-202ENST00000589219 ATP5IP56385 69 aaPredicted RBP8.15□□□□□ -1.1
VPS25-202ENST00000589219 LINC00205P59089 165 aa8.15□□□□□ -1.1
VPS25-202ENST00000589219 ZNF726P1Q15940 193 aa8.15□□□□□ -1.1
VPS25-202ENST00000589219 ACOT6Q3I5F7 207 aaPredicted RBP8.15□□□□□ -1.1
VPS25-202ENST00000589219 AVPI1Q5T686 147 aa8.15□□□□□ -1.1
VPS25-202ENST00000589219 RBMS3Q6XE24 437 aaKnown RBP8.15□□□□□ -1.1
VPS25-202ENST00000589219 SSX9Q7RTT3 188 aa8.15□□□□□ -1.1
VPS25-202ENST00000589219 SLC35E3Q7Z769 313 aa8.15□□□□□ -1.1
VPS25-202ENST00000589219 LINC00311Q8N616 119 aa8.15□□□□□ -1.1
VPS25-202ENST00000589219 RXFP4Q8TDU9 374 aa8.15□□□□□ -1.1
VPS25-202ENST00000589219 LEAP2Q969E1 77 aa8.15□□□□□ -1.1
VPS25-202ENST00000589219 FOXC2Q99958 501 aa8.15□□□□□ -1.1
VPS25-202ENST00000589219 RARRES2Q99969 163 aa8.15□□□□□ -1.1
VPS25-202ENST00000589219 ACTR3CQ9C0K3 210 aaPredicted RBP8.15□□□□□ -1.1
VPS25-202ENST00000589219 HEYLQ9NQ87 328 aaPredicted RBP8.15□□□□□ -1.1
VPS25-202ENST00000589219 MANBALQ9NQG1 85 aa8.15□□□□□ -1.1
VPS25-202ENST00000589219 SLC35D1Q9NTN3 355 aa8.15□□□□□ -1.1
VPS25-202ENST00000589219 TMEM14BQ9NUH8 114 aa8.15□□□□□ -1.1
VPS25-202ENST00000589219 GNG13Q9P2W3 67 aa8.15□□□□□ -1.1
VPS25-202ENST00000589219 VAX2Q9UIW0 290 aa8.15□□□□□ -1.1
VPS25-202ENST00000589219 ZNF257Q9Y2Q1 563 aa8.15□□□□□ -1.1
VPS25-202ENST00000589219 ANKHD1Q8IWZ3 2542 aaKnown RBP8.15□□□□□ -1.1
VPS25-202ENST00000589219 ITPR3Q14573 2671 aa8.15□□□□□ -1.11
VPS25-202ENST00000589219 ARID1AO14497 2285 aa8.14□□□□□ -1.11
VPS25-202ENST00000589219 SETD2Q9BYW2 2564 aaPredicted RBP8.14□□□□□ -1.11
VPS25-202ENST00000589219 RAI1Q7Z5J4 1906 aaPredicted RBP8.14□□□□□ -1.11
VPS25-202ENST00000589219 A0A087WWC5 75 aa8.14□□□□□ -1.11
VPS25-202ENST00000589219 IGHV1-69-2A0A0G2JMI3 117 aa8.14□□□□□ -1.11
VPS25-202ENST00000589219 A6NNC1 897 aa8.14□□□□□ -1.11
VPS25-202ENST00000589219 GOSR1O95249 250 aa8.14□□□□□ -1.11
VPS25-202ENST00000589219 IFNA10P01566 189 aa8.14□□□□□ -1.11
VPS25-202ENST00000589219 IGHV3-7P01780 117 aa8.14□□□□□ -1.11
VPS25-202ENST00000589219 HSPE1P61604 102 aaKnown RBP8.14□□□□□ -1.11
VPS25-202ENST00000589219 PNRC1Q12796 327 aaPredicted RBP8.14□□□□□ -1.11
VPS25-202ENST00000589219 SPINK9Q5DT21 86 aa8.14□□□□□ -1.11
VPS25-202ENST00000589219 FFAR4Q5NUL3 377 aa8.14□□□□□ -1.11
VPS25-202ENST00000589219 OR4A47Q6IF82 309 aa8.14□□□□□ -1.11
VPS25-202ENST00000589219 ACSM6Q6P461 480 aa8.14□□□□□ -1.11
VPS25-202ENST00000589219 LCN15Q6UWW0 184 aa8.14□□□□□ -1.11
VPS25-202ENST00000589219 ETV3LQ6ZN32 361 aa8.14□□□□□ -1.11
VPS25-202ENST00000589219 TGIF2LYQ8IUE0 185 aa8.14□□□□□ -1.11
VPS25-202ENST00000589219 CYB561D1Q8N8Q1 229 aa8.14□□□□□ -1.11
VPS25-202ENST00000589219 SLC24A4Q8NFF2 622 aa8.14□□□□□ -1.11
VPS25-202ENST00000589219 OSR1Q8TAX0 266 aaPredicted RBP8.14□□□□□ -1.11
VPS25-202ENST00000589219 ZNF596Q8TC21 504 aa8.14□□□□□ -1.11
VPS25-202ENST00000589219 RHOVQ96L33 236 aa8.14□□□□□ -1.11
VPS25-202ENST00000589219 NIPSNAP3BQ9BS92 247 aa8.14□□□□□ -1.11
VPS25-202ENST00000589219 VSIRQ9H7M9 311 aa8.14□□□□□ -1.11
VPS25-202ENST00000589219 SLC39A9Q9NUM3 307 aa8.14□□□□□ -1.11
VPS25-202ENST00000589219 FKBP11Q9NYL4 201 aa8.14□□□□□ -1.11
VPS25-202ENST00000589219 BET1LQ9NYM9 111 aa8.14□□□□□ -1.11
VPS25-202ENST00000589219 MLXQ9UH92 298 aa8.14□□□□□ -1.11
VPS25-202ENST00000589219 MAP1AP78559 2803 aaPredicted RBP8.14□□□□□ -1.11
VPS25-202ENST00000589219 TANC2Q9HCD6 1990 aa8.13□□□□□ -1.11
VPS25-202ENST00000589219 A0A087X0M5 115 aa8.13□□□□□ -1.11
VPS25-202ENST00000589219 A0A1B0GX30 115 aa8.13□□□□□ -1.11
VPS25-202ENST00000589219 A0A1W2PPE3 182 aa8.13□□□□□ -1.11
VPS25-202ENST00000589219 B4DEV8 164 aa8.13□□□□□ -1.11
VPS25-202ENST00000589219 SEC14L6B5MCN3 397 aa8.13□□□□□ -1.11
VPS25-202ENST00000589219 PRSS46E5RG02 174 aa8.13□□□□□ -1.11
VPS25-202ENST00000589219 H3BQ15 152 aa8.13□□□□□ -1.11
VPS25-202ENST00000589219 UPK2O00526 184 aa8.13□□□□□ -1.11
VPS25-202ENST00000589219 CYB5BO43169 146 aa8.13□□□□□ -1.11
VPS25-202ENST00000589219 MT-ND4LP03901 98 aa8.13□□□□□ -1.11
VPS25-202ENST00000589219 IL6RP08887 468 aaPredicted RBP8.13□□□□□ -1.11
VPS25-202ENST00000589219 CD99P14209 185 aa8.13□□□□□ -1.11
VPS25-202ENST00000589219 CTRB1P17538 263 aa8.13□□□□□ -1.11
VPS25-202ENST00000589219 NPY1RP25929 384 aa8.13□□□□□ -1.11
VPS25-202ENST00000589219 IL3RAP26951 378 aa8.13□□□□□ -1.11
VPS25-202ENST00000589219 LOXP28300 417 aaPredicted RBP8.13□□□□□ -1.11
VPS25-202ENST00000589219 CD1BP29016 333 aa8.13□□□□□ -1.11
VPS25-202ENST00000589219 PPOXP50336 477 aa8.13□□□□□ -1.11
VPS25-202ENST00000589219 ZNF137PP52743 207 aa8.13□□□□□ -1.11
VPS25-202ENST00000589219 PRCDQ00LT1 54 aa8.13□□□□□ -1.11
VPS25-202ENST00000589219 TMEM249Q2WGJ8 235 aa8.13□□□□□ -1.11
VPS25-202ENST00000589219 RNF212Q495C1 297 aa8.13□□□□□ -1.11
VPS25-202ENST00000589219 TMEM155Q4W5P6 130 aa8.13□□□□□ -1.11
VPS25-202ENST00000589219 AKIRIN2Q53H80 203 aa8.13□□□□□ -1.11
VPS25-202ENST00000589219 CTRB2Q6GPI1 263 aa8.13□□□□□ -1.11
VPS25-202ENST00000589219 C1orf229Q6ZS94 237 aaPredicted RBP8.13□□□□□ -1.11
VPS25-202ENST00000589219 SSX7Q7RTT5 188 aa8.13□□□□□ -1.11
VPS25-202ENST00000589219 PDPNQ86YL7 162 aa8.13□□□□□ -1.11
VPS25-202ENST00000589219 OR10G9Q8NGN4 311 aa8.13□□□□□ -1.11
VPS25-202ENST00000589219 OR10G7Q8NGN6 311 aa8.13□□□□□ -1.11
VPS25-202ENST00000589219 OR13D1Q8NGV5 346 aa8.13□□□□□ -1.11
VPS25-202ENST00000589219 OR4A5Q8NH83 315 aa8.13□□□□□ -1.11
VPS25-202ENST00000589219 H1FXQ92522 213 aaKnown RBP8.13□□□□□ -1.11
VPS25-202ENST00000589219 CCL17Q92583 94 aa8.13□□□□□ -1.11
VPS25-202ENST00000589219 RAB1CQ92928 201 aa8.13□□□□□ -1.11
VPS25-202ENST00000589219 LHX4Q969G2 390 aa8.13□□□□□ -1.11
VPS25-202ENST00000589219 TVP23CQ96ET8 276 aa8.13□□□□□ -1.11
VPS25-202ENST00000589219 NEIL1Q96FI4 390 aaPredicted RBP8.13□□□□□ -1.11
VPS25-202ENST00000589219 PCGF1Q9BSM1 259 aa8.13□□□□□ -1.11
VPS25-202ENST00000589219 AKAP6Q13023 2319 aa8.13□□□□□ -1.11
VPS25-202ENST00000589219 ZFP92A6NM28 416 aa8.12□□□□□ -1.11
VPS25-202ENST00000589219 COLCA2A8K830 154 aa8.12□□□□□ -1.11
VPS25-202ENST00000589219 DVL1O14640 695 aa8.12□□□□□ -1.11
VPS25-202ENST00000589219 MMP23AO75900 390 aa8.12□□□□□ -1.11
VPS25-202ENST00000589219 CT45A6P0DMU7 189 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms