RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 C5orf46Q6UWT4 87 aa1.32□□□□□ -2.2
SMAD4-207ENST00000589076 LRRN1Q6UXK5 716 aa1.32□□□□□ -2.2
SMAD4-207ENST00000589076 SLC35E3Q7Z769 313 aa1.32□□□□□ -2.2
SMAD4-207ENST00000589076 OR4X2Q8NGF9 303 aa1.32□□□□□ -2.2
SMAD4-207ENST00000589076 OR13C8Q8NGS7 320 aa1.32□□□□□ -2.2
SMAD4-207ENST00000589076 TMA16Q96EY4 203 aaKnown RBP1.32□□□□□ -2.2
SMAD4-207ENST00000589076 SFRP2Q96HF1 295 aa1.32□□□□□ -2.2
SMAD4-207ENST00000589076 NMNAT3Q96T66 252 aa1.32□□□□□ -2.2
SMAD4-207ENST00000589076 OR51I2Q9H344 312 aa1.32□□□□□ -2.2
SMAD4-207ENST00000589076 FKBP14Q9NWM8 211 aa1.32□□□□□ -2.2
SMAD4-207ENST00000589076 TAAR3PQ9P1P4 343 aa1.32□□□□□ -2.2
SMAD4-207ENST00000589076 DKKL1Q9UK85 242 aa1.32□□□□□ -2.2
SMAD4-207ENST00000589076 MYH11P35749 1972 aa1.32□□□□□ -2.2
SMAD4-207ENST00000589076 ABCC12Q96J65 1359 aa1.32□□□□□ -2.2
SMAD4-207ENST00000589076 NUP160Q12769 1436 aa1.32□□□□□ -2.2
SMAD4-207ENST00000589076 LAMB4A4D0S4 1761 aa1.31□□□□□ -2.2
SMAD4-207ENST00000589076 DCHS1Q96JQ0 3298 aa1.31□□□□□ -2.2
SMAD4-207ENST00000589076 LRRN3E7EW58 273 aa1.31□□□□□ -2.2
SMAD4-207ENST00000589076 J3QQQ9 107 aa1.31□□□□□ -2.2
SMAD4-207ENST00000589076 COX7A2LO14548 114 aa1.31□□□□□ -2.2
SMAD4-207ENST00000589076 BPGMP07738 259 aa1.31□□□□□ -2.2
SMAD4-207ENST00000589076 RPL12P30050 165 aaKnown RBP1.31□□□□□ -2.2
SMAD4-207ENST00000589076 RPL26P61254 145 aaKnown RBP1.31□□□□□ -2.2
SMAD4-207ENST00000589076 AP1S1P61966 158 aa1.31□□□□□ -2.2
SMAD4-207ENST00000589076 ERHP84090 104 aaKnown RBP1.31□□□□□ -2.2
SMAD4-207ENST00000589076 BATFQ16520 125 aa1.31□□□□□ -2.2
SMAD4-207ENST00000589076 Q6ZTI0 123 aa1.31□□□□□ -2.2
SMAD4-207ENST00000589076 RASSF6Q6ZTQ3 369 aa1.31□□□□□ -2.2
SMAD4-207ENST00000589076 COMMD7Q86VX2 200 aa1.31□□□□□ -2.2
SMAD4-207ENST00000589076 RAB2BQ8WUD1 216 aa1.31□□□□□ -2.2
SMAD4-207ENST00000589076 GNPNAT1Q96EK6 184 aaPredicted RBP1.31□□□□□ -2.2
SMAD4-207ENST00000589076 HRASLSQ9HDD0 168 aa1.31□□□□□ -2.2
SMAD4-207ENST00000589076 RPL26L1Q9UNX3 145 aaKnown RBP1.31□□□□□ -2.2
SMAD4-207ENST00000589076 HHLA3Q9XRX5 114 aa1.31□□□□□ -2.2
SMAD4-207ENST00000589076 COL4A1P02462 1669 aa1.31□□□□□ -2.2
SMAD4-207ENST00000589076 MUC6Q6W4X9 2439 aa1.31□□□□□ -2.2
SMAD4-207ENST00000589076 ZNF532Q9HCE3 1301 aa1.31□□□□□ -2.2
SMAD4-207ENST00000589076 IGF2RP11717 2491 aa1.31□□□□□ -2.2
SMAD4-207ENST00000589076 MTORP42345 2549 aa1.31□□□□□ -2.2
SMAD4-207ENST00000589076 C9orf84Q5VXU9 1444 aa1.31□□□□□ -2.2
SMAD4-207ENST00000589076 PXDNLA1KZ92 1463 aa1.31□□□□□ -2.2
SMAD4-207ENST00000589076 TRAV41A0A0B4J266 112 aa1.3□□□□□ -2.2
SMAD4-207ENST00000589076 PEBP1P30086 187 aaKnown RBP1.3□□□□□ -2.2
SMAD4-207ENST00000589076 SLCO1A2P46721 670 aa1.3□□□□□ -2.2
SMAD4-207ENST00000589076 RAP1GDS1P52306 607 aa1.3□□□□□ -2.2
SMAD4-207ENST00000589076 AP2S1P53680 142 aaPredicted RBP1.3□□□□□ -2.2
SMAD4-207ENST00000589076 EMP1P54849 157 aa1.3□□□□□ -2.2
SMAD4-207ENST00000589076 FXYD7P58549 80 aa1.3□□□□□ -2.2
SMAD4-207ENST00000589076 MAGOHP61326 146 aaKnown RBP1.3□□□□□ -2.2
SMAD4-207ENST00000589076 TPRXLQ17RH7 258 aa1.3□□□□□ -2.2
SMAD4-207ENST00000589076 LRRC75BQ2VPJ9 315 aa1.3□□□□□ -2.2
SMAD4-207ENST00000589076 KRTAP13-4Q3LI77 160 aa1.3□□□□□ -2.2
SMAD4-207ENST00000589076 SAPCD1Q5SSQ6 148 aa1.3□□□□□ -2.2
SMAD4-207ENST00000589076 GPHB5Q86YW7 130 aa1.3□□□□□ -2.2
SMAD4-207ENST00000589076 OR2T27Q8NH04 317 aa1.3□□□□□ -2.2
SMAD4-207ENST00000589076 ZNF675Q8TD23 568 aa1.3□□□□□ -2.2
SMAD4-207ENST00000589076 DDI1Q8WTU0 396 aa1.3□□□□□ -2.2
SMAD4-207ENST00000589076 TIMM21Q9BVV7 248 aa1.3□□□□□ -2.2
SMAD4-207ENST00000589076 TTTY13Q9BZ97 58 aa1.3□□□□□ -2.2
SMAD4-207ENST00000589076 C3orf18Q9UK00 162 aa1.3□□□□□ -2.2
SMAD4-207ENST00000589076 ANAPC10Q9UM13 185 aa1.3□□□□□ -2.2
SMAD4-207ENST00000589076 DSPP15924 2871 aaKnown RBP1.3□□□□□ -2.2
SMAD4-207ENST00000589076 RALGAPA2Q2PPJ7 1873 aa1.29□□□□□ -2.2
SMAD4-207ENST00000589076 HEATR5AQ86XA9 2040 aa1.29□□□□□ -2.2
SMAD4-207ENST00000589076 IGHV1-69-2A0A0G2JMI3 117 aa1.29□□□□□ -2.2
SMAD4-207ENST00000589076 C21orf140B9A014 251 aa1.29□□□□□ -2.2
SMAD4-207ENST00000589076 UCHL3P15374 230 aa1.29□□□□□ -2.2
SMAD4-207ENST00000589076 CA5AP35218 305 aa1.29□□□□□ -2.2
SMAD4-207ENST00000589076 RELAQ04206 551 aa1.29□□□□□ -2.2
SMAD4-207ENST00000589076 AKR1C1Q04828 323 aa1.29□□□□□ -2.2
SMAD4-207ENST00000589076 RSU1Q15404 277 aa1.29□□□□□ -2.2
SMAD4-207ENST00000589076 MIAQ16674 131 aa1.29□□□□□ -2.2
SMAD4-207ENST00000589076 CDKL4Q5MAI5 379 aa1.29□□□□□ -2.2
SMAD4-207ENST00000589076 CLVS2Q5SYC1 327 aa1.29□□□□□ -2.2
SMAD4-207ENST00000589076 C1orf194Q5T5A4 169 aa1.29□□□□□ -2.2
SMAD4-207ENST00000589076 C1orf195Q5TG92 126 aa1.29□□□□□ -2.2
SMAD4-207ENST00000589076 HIST2H3AQ71DI3 136 aa1.29□□□□□ -2.2
SMAD4-207ENST00000589076 UMODL1-AS1Q8N2C9 162 aa1.29□□□□□ -2.2
SMAD4-207ENST00000589076 RNF133Q8WVZ7 376 aa1.29□□□□□ -2.2
SMAD4-207ENST00000589076 RAB8BQ92930 207 aa1.29□□□□□ -2.2
SMAD4-207ENST00000589076 TESCQ96BS2 214 aa1.29□□□□□ -2.2
SMAD4-207ENST00000589076 NOSIPQ9Y314 301 aaKnown RBP1.29□□□□□ -2.2
SMAD4-207ENST00000589076 DISP1Q96F81 1524 aa1.29□□□□□ -2.2
SMAD4-207ENST00000589076 TGP01266 2768 aa1.29□□□□□ -2.2
SMAD4-207ENST00000589076 MAST2Q6P0Q8 1798 aa1.29□□□□□ -2.2
SMAD4-207ENST00000589076 CFAP54Q96N23 3096 aa1.29□□□□□ -2.2
SMAD4-207ENST00000589076 HTTP42858 3142 aa1.29□□□□□ -2.2
SMAD4-207ENST00000589076 CRYBG3Q68DQ2 2970 aa1.28□□□□□ -2.2
SMAD4-207ENST00000589076 IGHV3-64A0A075B6Q5 118 aa1.28□□□□□ -2.2
SMAD4-207ENST00000589076 TMSB15BA0A087X1C1 80 aa1.28□□□□□ -2.2
SMAD4-207ENST00000589076 ZNF860A6NHJ4 632 aa1.28□□□□□ -2.2
SMAD4-207ENST00000589076 RFPL4AA6NLU0 287 aa1.28□□□□□ -2.2
SMAD4-207ENST00000589076 SIGLEC16A6NMB1 481 aa1.28□□□□□ -2.2
SMAD4-207ENST00000589076 OR4C45A6NMZ5 311 aa1.28□□□□□ -2.2
SMAD4-207ENST00000589076 RFPL4AL1F8VTS6 287 aa1.28□□□□□ -2.2
SMAD4-207ENST00000589076 ACOX3O15254 700 aa1.28□□□□□ -2.2
SMAD4-207ENST00000589076 KLRC4O43908 158 aa1.28□□□□□ -2.2
SMAD4-207ENST00000589076 REG1AP05451 166 aa1.28□□□□□ -2.2
SMAD4-207ENST00000589076 KRT7P08729 469 aa1.28□□□□□ -2.2
SMAD4-207ENST00000589076 CCL1P22362 96 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms