RNA–Protein interactions for RNA: ENST00000588667.5

ATG4D-208, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,619 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-208ENST00000588667 IGKV1-5P01602 117 aa16.01■□□□□ 0.15
ATG4D-208ENST00000588667 RLN2P04090 185 aa16.01■□□□□ 0.15
ATG4D-208ENST00000588667 AMY1AP04745 511 aa16.01■□□□□ 0.15
ATG4D-208ENST00000588667 MC5RP33032 325 aa16.01■□□□□ 0.15
ATG4D-208ENST00000588667 TAGLNQ01995 201 aaKnown RBP16.01■□□□□ 0.15
ATG4D-208ENST00000588667 C3orf56Q8N813 242 aa16.01■□□□□ 0.15
ATG4D-208ENST00000588667 ZNF383Q8NA42 475 aa16.01■□□□□ 0.15
ATG4D-208ENST00000588667 OR4D5Q8NGN0 318 aa16.01■□□□□ 0.15
ATG4D-208ENST00000588667 GPR146Q96CH1 333 aa16.01■□□□□ 0.15
ATG4D-208ENST00000588667 H0YJW9 148 aa16.01■□□□□ 0.15
ATG4D-208ENST00000588667 KRASP01116 189 aa16.01■□□□□ 0.15
ATG4D-208ENST00000588667 C4BPBP20851 252 aa16.01■□□□□ 0.15
ATG4D-208ENST00000588667 C5orf56Q8N8D9 126 aa16.01■□□□□ 0.15
ATG4D-208ENST00000588667 WASHC3Q9Y3C0 194 aa16.01■□□□□ 0.15
ATG4D-208ENST00000588667 A0A0G2JRQ6 117 aa16■□□□□ 0.15
ATG4D-208ENST00000588667 ST8SIA3O43173 380 aa16■□□□□ 0.15
ATG4D-208ENST00000588667 G6PCP35575 357 aa16■□□□□ 0.15
ATG4D-208ENST00000588667 NKX2-1P43699 371 aaPredicted RBP16■□□□□ 0.15
ATG4D-208ENST00000588667 PROK1P58294 105 aa16■□□□□ 0.15
ATG4D-208ENST00000588667 RTL8BQ17RB0 113 aa16■□□□□ 0.15
ATG4D-208ENST00000588667 LGALSLQ3ZCW2 172 aaPredicted RBP16■□□□□ 0.15
ATG4D-208ENST00000588667 SIGLEC9Q9Y336 463 aa16■□□□□ 0.15
ATG4D-208ENST00000588667 NCBP2LA6PVI3 153 aaKnown RBP15.99■□□□□ 0.15
ATG4D-208ENST00000588667 L7N2F9 121 aa15.99■□□□□ 0.15
ATG4D-208ENST00000588667 APOA2P02652 100 aa15.99■□□□□ 0.15
ATG4D-208ENST00000588667 MBPP02686 304 aaPredicted RBP15.99■□□□□ 0.15
ATG4D-208ENST00000588667 RRASP10301 218 aa15.99■□□□□ 0.15
ATG4D-208ENST00000588667 LYL1P12980 280 aa15.99■□□□□ 0.15
ATG4D-208ENST00000588667 ERVK-16P61578 105 aa15.99■□□□□ 0.15
ATG4D-208ENST00000588667 Q6ZS46 218 aa15.99■□□□□ 0.15
ATG4D-208ENST00000588667 FOXRED2Q8IWF2 684 aa15.99■□□□□ 0.15
ATG4D-208ENST00000588667 OR1S1Q8NH92 325 aa15.99■□□□□ 0.15
ATG4D-208ENST00000588667 WFDC12Q8WWY7 111 aa15.99■□□□□ 0.15
ATG4D-208ENST00000588667 DCUN1D4Q92564 292 aa15.99■□□□□ 0.15
ATG4D-208ENST00000588667 R3HDM4Q96D70 268 aa15.99■□□□□ 0.15
ATG4D-208ENST00000588667 RNF126Q9BV68 326 aa15.99■□□□□ 0.15
ATG4D-208ENST00000588667 MFFQ9GZY8 342 aa15.99■□□□□ 0.15
ATG4D-208ENST00000588667 PLSCR3Q9NRY6 295 aa15.99■□□□□ 0.15
ATG4D-208ENST00000588667 CACNG5Q9UF02 275 aa15.99■□□□□ 0.15
ATG4D-208ENST00000588667 TNFSF18Q9UNG2 199 aa15.99■□□□□ 0.15
ATG4D-208ENST00000588667 BOLA1Q9Y3E2 137 aa15.99■□□□□ 0.15
ATG4D-208ENST00000588667 LSM5Q9Y4Y9 91 aaKnown RBP15.99■□□□□ 0.15
ATG4D-208ENST00000588667 MARCH11A6NNE9 402 aa15.98■□□□□ 0.15
ATG4D-208ENST00000588667 H0YIZ8 118 aa15.98■□□□□ 0.15
ATG4D-208ENST00000588667 DEDDO75618 318 aa15.98■□□□□ 0.15
ATG4D-208ENST00000588667 ARSJQ5FYB0 599 aaPredicted RBP15.98■□□□□ 0.15
ATG4D-208ENST00000588667 H2BFWTQ7Z2G1 175 aa15.98■□□□□ 0.15
ATG4D-208ENST00000588667 INO80EQ8NBZ0 244 aaPredicted RBP15.98■□□□□ 0.15
ATG4D-208ENST00000588667 RBMXL1Q96E39 390 aaKnown RBP15.98■□□□□ 0.15
ATG4D-208ENST00000588667 ZNF747Q9BV97 191 aa15.98■□□□□ 0.15
ATG4D-208ENST00000588667 SLC35D1Q9NTN3 355 aa15.98■□□□□ 0.15
ATG4D-208ENST00000588667 COA4Q9NYJ1 87 aa15.98■□□□□ 0.15
ATG4D-208ENST00000588667 H7C2Y5 167 aa15.97■□□□□ 0.15
ATG4D-208ENST00000588667 K7EPK0 472 aa15.97■□□□□ 0.15
ATG4D-208ENST00000588667 PITX3O75364 302 aa15.97■□□□□ 0.15
ATG4D-208ENST00000588667 CRYZL1O95825 349 aa15.97■□□□□ 0.15
ATG4D-208ENST00000588667 P0C879 139 aa15.97■□□□□ 0.15
ATG4D-208ENST00000588667 NQO2P16083 231 aa15.97■□□□□ 0.15
ATG4D-208ENST00000588667 CXCL2P19875 107 aa15.97■□□□□ 0.15
ATG4D-208ENST00000588667 NUP62P37198 522 aaPredicted RBP15.97■□□□□ 0.15
ATG4D-208ENST00000588667 MMDQ15546 238 aa15.97■□□□□ 0.15
ATG4D-208ENST00000588667 PDPNQ86YL7 162 aa15.97■□□□□ 0.15
ATG4D-208ENST00000588667 FAM71E2Q8N5Q1 922 aa15.97■□□□□ 0.15
ATG4D-208ENST00000588667 Q8N9W7 124 aa15.97■□□□□ 0.15
ATG4D-208ENST00000588667 DMBX1Q8NFW5 382 aa15.97■□□□□ 0.15
ATG4D-208ENST00000588667 SERTAD4Q9NUC0 356 aa15.97■□□□□ 0.15
ATG4D-208ENST00000588667 OR5AC2Q9NZP5 309 aa15.97■□□□□ 0.15
ATG4D-208ENST00000588667 F2RL1P55085 397 aa15.97■□□□□ 0.15
ATG4D-208ENST00000588667 OR2F1Q13607 317 aa15.97■□□□□ 0.15
ATG4D-208ENST00000588667 ZNF345Q14585 488 aa15.97■□□□□ 0.15
ATG4D-208ENST00000588667 Q6ZRM9 215 aa15.97■□□□□ 0.15
ATG4D-208ENST00000588667 ACOT7LQ6ZUV0 252 aa15.97■□□□□ 0.15
ATG4D-208ENST00000588667 A0A0D9SG52 128 aa15.96■□□□□ 0.15
ATG4D-208ENST00000588667 SH2D7A6NKC9 451 aaPredicted RBP15.96■□□□□ 0.15
ATG4D-208ENST00000588667 HAX1O00165 279 aa15.96■□□□□ 0.15
ATG4D-208ENST00000588667 HRASP01112 189 aa15.96■□□□□ 0.15
ATG4D-208ENST00000588667 VDAC2P45880 294 aaPredicted RBP15.96■□□□□ 0.15
ATG4D-208ENST00000588667 ID3Q02535 119 aa15.96■□□□□ 0.15
ATG4D-208ENST00000588667 IZUMO4Q1ZYL8 232 aa15.96■□□□□ 0.15
ATG4D-208ENST00000588667 RITA1Q96K30 269 aa15.96■□□□□ 0.15
ATG4D-208ENST00000588667 RNF5Q99942 180 aa15.96■□□□□ 0.15
ATG4D-208ENST00000588667 AIFM2Q9BRQ8 373 aa15.96■□□□□ 0.15
ATG4D-208ENST00000588667 E5RGE8 158 aa15.95■□□□□ 0.14
ATG4D-208ENST00000588667 WRBO00258 174 aa15.95■□□□□ 0.14
ATG4D-208ENST00000588667 NBR2O15453 112 aa15.95■□□□□ 0.14
ATG4D-208ENST00000588667 IGKV1-16P04430 117 aa15.95■□□□□ 0.14
ATG4D-208ENST00000588667 PVALBP20472 110 aaPredicted RBP15.95■□□□□ 0.14
ATG4D-208ENST00000588667 TMEM95Q3KNT9 176 aa15.95■□□□□ 0.14
ATG4D-208ENST00000588667 CXorf66Q5JRM2 361 aaPredicted RBP15.95■□□□□ 0.14
ATG4D-208ENST00000588667 C9orf152Q5JTZ5 239 aa15.95■□□□□ 0.14
ATG4D-208ENST00000588667 NPBQ8NG41 125 aa15.95■□□□□ 0.14
ATG4D-208ENST00000588667 RASL11BQ9BPW5 248 aa15.95■□□□□ 0.14
ATG4D-208ENST00000588667 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.95■□□□□ 0.14
ATG4D-208ENST00000588667 NSG2Q9Y328 171 aa15.95■□□□□ 0.14
ATG4D-208ENST00000588667 FAM90A26D6RGX4 464 aa15.94■□□□□ 0.14
ATG4D-208ENST00000588667 S100A11P31949 105 aa15.94■□□□□ 0.14
ATG4D-208ENST00000588667 AP2S1P53680 142 aaPredicted RBP15.94■□□□□ 0.14
ATG4D-208ENST00000588667 SHISA2Q6UWI4 295 aa15.94■□□□□ 0.14
ATG4D-208ENST00000588667 KLHDC1Q8N7A1 406 aa15.94■□□□□ 0.14
ATG4D-208ENST00000588667 KIAA1456Q9P272 454 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms