RNA–Protein interactions for RNA: ENST00000588477.5

IFT20-216, Transcript of intraflagellar transport 20, humanhuman

TSL 5 BASIC

Gene IFT20, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-216ENST00000588477 LIPKQ5VXJ0 399 aa11.21□□□□□ -0.61
IFT20-216ENST00000588477 TMEM91Q6ZNR0 172 aa11.21□□□□□ -0.61
IFT20-216ENST00000588477 C8orf59Q8N0T1 100 aaPredicted RBP11.21□□□□□ -0.61
IFT20-216ENST00000588477 OR10R2Q8NGX6 335 aa11.21□□□□□ -0.61
IFT20-216ENST00000588477 TCTEX1D2Q8WW35 142 aa11.21□□□□□ -0.61
IFT20-216ENST00000588477 TMEM190Q8WZ59 177 aa11.21□□□□□ -0.61
IFT20-216ENST00000588477 CENPOQ9BU64 300 aa11.21□□□□□ -0.61
IFT20-216ENST00000588477 C6orf62Q9GZU0 229 aaPredicted RBP11.21□□□□□ -0.61
IFT20-216ENST00000588477 C11orf68Q9H3H3 251 aaKnown RBP11.21□□□□□ -0.61
IFT20-216ENST00000588477 FKBP14Q9NWM8 211 aa11.21□□□□□ -0.61
IFT20-216ENST00000588477 SPATA2Q9UM82 520 aa11.21□□□□□ -0.61
IFT20-216ENST00000588477 MFNGO00587 321 aa11.2□□□□□ -0.62
IFT20-216ENST00000588477 TGOLN2O43493 480 aa11.2□□□□□ -0.62
IFT20-216ENST00000588477 IGLV2-14P01704 120 aa11.2□□□□□ -0.62
IFT20-216ENST00000588477 CTSDP07339 412 aaPredicted RBP11.2□□□□□ -0.62
IFT20-216ENST00000588477 NFYAP23511 347 aaPredicted RBP11.2□□□□□ -0.62
IFT20-216ENST00000588477 GADD45AP24522 165 aa11.2□□□□□ -0.62
IFT20-216ENST00000588477 TALDO1P37837 337 aa11.2□□□□□ -0.62
IFT20-216ENST00000588477 MFAP2P55001 183 aa11.2□□□□□ -0.62
IFT20-216ENST00000588477 BRWD1-AS2P59051 145 aa11.2□□□□□ -0.62
IFT20-216ENST00000588477 SPHARQ15513 63 aa11.2□□□□□ -0.62
IFT20-216ENST00000588477 HES5Q5TA89 166 aa11.2□□□□□ -0.62
IFT20-216ENST00000588477 GVQW1Q8N7I0 195 aa11.2□□□□□ -0.62
IFT20-216ENST00000588477 DAZ1Q9NQZ3 744 aaKnown RBP11.2□□□□□ -0.62
IFT20-216ENST00000588477 OR2W1Q9Y3N9 320 aa11.2□□□□□ -0.62
IFT20-216ENST00000588477 HRASP01112 189 aa11.19□□□□□ -0.62
IFT20-216ENST00000588477 HLA-DQB1P01920 261 aa11.19□□□□□ -0.62
IFT20-216ENST00000588477 HIST1H1DP16402 221 aaKnown RBP11.19□□□□□ -0.62
IFT20-216ENST00000588477 HLA-GP17693 338 aa11.19□□□□□ -0.62
IFT20-216ENST00000588477 PTBP1P26599 531 aaKnown RBP eCLIP11.19□□□□□ -0.62
IFT20-216ENST00000588477 Q6ZS49 121 aa11.19□□□□□ -0.62
IFT20-216ENST00000588477 MFSD4AQ8N468 514 aa11.19□□□□□ -0.62
IFT20-216ENST00000588477 HSD17B10Q99714 261 aaKnown RBP11.19□□□□□ -0.62
IFT20-216ENST00000588477 C20orf24Q9BUV8 137 aa11.19□□□□□ -0.62
IFT20-216ENST00000588477 THYN1Q9P016 225 aa11.19□□□□□ -0.62
IFT20-216ENST00000588477 ELF5Q9UKW6 265 aaPredicted RBP11.19□□□□□ -0.62
IFT20-216ENST00000588477 LSM2Q9Y333 95 aaKnown RBP11.19□□□□□ -0.62
IFT20-216ENST00000588477 V9GY05 133 aa11.19□□□□□ -0.62
IFT20-216ENST00000588477 FAT2Q9NYQ8 4349 aa11.18□□□□□ -0.62
IFT20-216ENST00000588477 IGHV3OR16-8A0A075B7F1 116 aa11.18□□□□□ -0.62
IFT20-216ENST00000588477 IGKV1D-13A0A0B4J2D9 117 aa11.18□□□□□ -0.62
IFT20-216ENST00000588477 OR2T8A6NH00 312 aa11.18□□□□□ -0.62
IFT20-216ENST00000588477 ZNF207O43670 478 aaKnown RBP11.18□□□□□ -0.62
IFT20-216ENST00000588477 ARL6IP5O75915 188 aa11.18□□□□□ -0.62
IFT20-216ENST00000588477 SLC22A5O76082 557 aa11.18□□□□□ -0.62
IFT20-216ENST00000588477 IGKV1-13P0DP09 117 aa11.18□□□□□ -0.62
IFT20-216ENST00000588477 CALRP27797 417 aaKnown RBP11.18□□□□□ -0.62
IFT20-216ENST00000588477 RANBP1P43487 201 aa11.18□□□□□ -0.62
IFT20-216ENST00000588477 RPS25P62851 125 aaKnown RBP11.18□□□□□ -0.62
IFT20-216ENST00000588477 OR4A5Q8NH83 315 aa11.18□□□□□ -0.62
IFT20-216ENST00000588477 UFD1Q92890 307 aa11.18□□□□□ -0.62
IFT20-216ENST00000588477 GPHA2Q96T91 129 aa11.18□□□□□ -0.62
IFT20-216ENST00000588477 TAS2R8Q9NYW2 309 aa11.18□□□□□ -0.62
IFT20-216ENST00000588477 PTGES3LE9PB15 166 aa11.17□□□□□ -0.62
IFT20-216ENST00000588477 OR2B8PP59922 312 aa11.17□□□□□ -0.62
IFT20-216ENST00000588477 EIF4EBP1Q13541 118 aaPredicted RBP11.17□□□□□ -0.62
IFT20-216ENST00000588477 SSX1Q16384 188 aa11.17□□□□□ -0.62
IFT20-216ENST00000588477 HRASLSQ9HDD0 168 aa11.17□□□□□ -0.62
IFT20-216ENST00000588477 BET1LQ9NYM9 111 aa11.17□□□□□ -0.62
IFT20-216ENST00000588477 DNAH2Q9P225 4427 aa11.17□□□□□ -0.62
IFT20-216ENST00000588477 AGRNO00468 2067 aa11.16□□□□□ -0.62
IFT20-216ENST00000588477 IGLC7A0M8Q6 106 aa11.16□□□□□ -0.62
IFT20-216ENST00000588477 C11orf94C9JXX5 98 aa11.16□□□□□ -0.62
IFT20-216ENST00000588477 NDUFA4O00483 81 aa11.16□□□□□ -0.62
IFT20-216ENST00000588477 CTXN2P0C2S0 81 aa11.16□□□□□ -0.62
IFT20-216ENST00000588477 ADMP35318 185 aa11.16□□□□□ -0.62
IFT20-216ENST00000588477 TFPI2P48307 235 aa11.16□□□□□ -0.62
IFT20-216ENST00000588477 TIMM50Q3ZCQ8 353 aa11.16□□□□□ -0.62
IFT20-216ENST00000588477 VN1R17PQ8TDU5 208 aa11.16□□□□□ -0.62
IFT20-216ENST00000588477 BSCL2Q96G97 398 aaPredicted RBP11.16□□□□□ -0.62
IFT20-216ENST00000588477 CHRDL1Q9BU40 450 aa11.16□□□□□ -0.62
IFT20-216ENST00000588477 ABCA13Q86UQ4 5058 aa11.15□□□□□ -0.62
IFT20-216ENST00000588477 DNAH17Q9UFH2 4485 aa11.15□□□□□ -0.62
IFT20-216ENST00000588477 IGKV3-7A0A075B6H7 116 aa11.15□□□□□ -0.62
IFT20-216ENST00000588477 IGHV3-21A0A0B4J1V1 117 aa11.15□□□□□ -0.62
IFT20-216ENST00000588477 TRAV3A0A0B4J244 114 aa11.15□□□□□ -0.62
IFT20-216ENST00000588477 PRSS29PA6NIE9 313 aa11.15□□□□□ -0.62
IFT20-216ENST00000588477 K7EMT4 169 aa11.15□□□□□ -0.62
IFT20-216ENST00000588477 CA1P00915 261 aaPredicted RBP11.15□□□□□ -0.62
IFT20-216ENST00000588477 HSMCR30P0CW71 290 aa11.15□□□□□ -0.62
IFT20-216ENST00000588477 DTYMKP23919 212 aa11.15□□□□□ -0.62
IFT20-216ENST00000588477 CMC4P56277 68 aaPredicted RBP11.15□□□□□ -0.62
IFT20-216ENST00000588477 IRF3Q14653 427 aa11.15□□□□□ -0.62
IFT20-216ENST00000588477 TRAM1Q15629 374 aa11.15□□□□□ -0.62
IFT20-216ENST00000588477 SLC25A24Q6NUK1 477 aa11.15□□□□□ -0.62
IFT20-216ENST00000588477 ZNF66Q6ZN08 573 aa11.15□□□□□ -0.62
IFT20-216ENST00000588477 PACRGLQ8N7B6 248 aa11.15□□□□□ -0.62
IFT20-216ENST00000588477 OR10W1Q8NGF6 305 aa11.15□□□□□ -0.62
IFT20-216ENST00000588477 RNF2Q99496 336 aa11.15□□□□□ -0.62
IFT20-216ENST00000588477 ETV7Q9Y603 341 aa11.15□□□□□ -0.62
IFT20-216ENST00000588477 METTL21EPA6NDL7 271 aa11.14□□□□□ -0.63
IFT20-216ENST00000588477 ERICH4A6NGS2 130 aa11.14□□□□□ -0.63
IFT20-216ENST00000588477 TNFSF12O43508 249 aa11.14□□□□□ -0.63
IFT20-216ENST00000588477 RAB6AP20340 208 aa11.14□□□□□ -0.63
IFT20-216ENST00000588477 FABP5Q01469 135 aa11.14□□□□□ -0.63
IFT20-216ENST00000588477 TMEM187Q14656 261 aa11.14□□□□□ -0.63
IFT20-216ENST00000588477 SPSB3Q6PJ21 355 aa11.14□□□□□ -0.63
IFT20-216ENST00000588477 AIFM2Q9BRQ8 373 aa11.14□□□□□ -0.63
IFT20-216ENST00000588477 KRTAP4-5Q9BYR2 181 aa11.14□□□□□ -0.63
IFT20-216ENST00000588477 COMMD5Q9GZQ3 224 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms