RNA–Protein interactions for RNA: ENST00000588261.1

HDAC5-207, Transcript of histone deacetylase 5, humanhuman

TSL 3

Gene HDAC5, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-207ENST00000588261 ZNF695Q8IW36 515 aa11.69□□□□□ -0.54
HDAC5-207ENST00000588261 VKORC1L1Q8N0U8 176 aa11.69□□□□□ -0.54
HDAC5-207ENST00000588261 LSM10Q969L4 123 aaKnown RBP11.69□□□□□ -0.54
HDAC5-207ENST00000588261 RBMXL1Q96E39 390 aaKnown RBP11.69□□□□□ -0.54
HDAC5-207ENST00000588261 MARVELD1Q9BSK0 173 aa11.69□□□□□ -0.54
HDAC5-207ENST00000588261 GON7Q9BXV9 100 aa11.69□□□□□ -0.54
HDAC5-207ENST00000588261 TPSG1Q9NRR2 321 aa11.69□□□□□ -0.54
HDAC5-207ENST00000588261 SHPKQ9UHJ6 478 aa11.69□□□□□ -0.54
HDAC5-207ENST00000588261 TRAV6A0A075B6T7 132 aa11.68□□□□□ -0.54
HDAC5-207ENST00000588261 C9orf170A2RU37 121 aa11.68□□□□□ -0.54
HDAC5-207ENST00000588261 PRAF2O60831 178 aa11.68□□□□□ -0.54
HDAC5-207ENST00000588261 ACTL6BO94805 426 aa11.68□□□□□ -0.54
HDAC5-207ENST00000588261 DUS4LO95620 317 aaKnown RBP11.68□□□□□ -0.54
HDAC5-207ENST00000588261 IL5P05113 134 aa11.68□□□□□ -0.54
HDAC5-207ENST00000588261 ANXA7P20073 488 aaKnown RBP11.68□□□□□ -0.54
HDAC5-207ENST00000588261 VDAC1P21796 283 aa11.68□□□□□ -0.54
HDAC5-207ENST00000588261 G6PCP35575 357 aa11.68□□□□□ -0.54
HDAC5-207ENST00000588261 CX3CL1P78423 397 aa11.68□□□□□ -0.54
HDAC5-207ENST00000588261 MRGPRG-AS1Q2M3A8 158 aa11.68□□□□□ -0.54
HDAC5-207ENST00000588261 C4orf46Q504U0 113 aa11.68□□□□□ -0.54
HDAC5-207ENST00000588261 ARSJQ5FYB0 599 aaPredicted RBP11.68□□□□□ -0.54
HDAC5-207ENST00000588261 C9orf152Q5JTZ5 239 aa11.68□□□□□ -0.54
HDAC5-207ENST00000588261 TMEM268Q5VZI3 342 aa11.68□□□□□ -0.54
HDAC5-207ENST00000588261 THOC7Q6I9Y2 204 aaKnown RBP11.68□□□□□ -0.54
HDAC5-207ENST00000588261 SSX9Q7RTT3 188 aa11.68□□□□□ -0.54
HDAC5-207ENST00000588261 H2BFWTQ7Z2G1 175 aa11.68□□□□□ -0.54
HDAC5-207ENST00000588261 SELENOHQ8IZQ5 122 aaKnown RBP11.68□□□□□ -0.54
HDAC5-207ENST00000588261 COQ8AQ8NI60 647 aa11.68□□□□□ -0.54
HDAC5-207ENST00000588261 LHFPL5Q8TAF8 219 aa11.68□□□□□ -0.54
HDAC5-207ENST00000588261 CHPT1Q8WUD6 406 aa11.68□□□□□ -0.54
HDAC5-207ENST00000588261 RRNAD1Q96FB5 475 aaKnown RBP11.68□□□□□ -0.54
HDAC5-207ENST00000588261 TMEM68Q96MH6 324 aa11.68□□□□□ -0.54
HDAC5-207ENST00000588261 CITED2Q99967 270 aaPredicted RBP11.68□□□□□ -0.54
HDAC5-207ENST00000588261 HSPB9Q9BQS6 159 aa11.68□□□□□ -0.54
HDAC5-207ENST00000588261 ZNF430Q9H8G1 570 aaPredicted RBP11.68□□□□□ -0.54
HDAC5-207ENST00000588261 CACFD1Q9UGQ2 172 aa11.68□□□□□ -0.54
HDAC5-207ENST00000588261 PRNDQ9UKY0 176 aa11.68□□□□□ -0.54
HDAC5-207ENST00000588261 TNCP24821 2201 aa11.67□□□□□ -0.54
HDAC5-207ENST00000588261 FCN1O00602 326 aa11.67□□□□□ -0.54
HDAC5-207ENST00000588261 SNAPC5O75971 98 aa11.67□□□□□ -0.54
HDAC5-207ENST00000588261 IGKV1-5P01602 117 aa11.67□□□□□ -0.54
HDAC5-207ENST00000588261 HLA-GP17693 338 aa11.67□□□□□ -0.54
HDAC5-207ENST00000588261 RAB25P57735 213 aa11.67□□□□□ -0.54
HDAC5-207ENST00000588261 SSBP2P81877 361 aaPredicted RBP11.67□□□□□ -0.54
HDAC5-207ENST00000588261 RGS21Q2M5E4 152 aa11.67□□□□□ -0.54
HDAC5-207ENST00000588261 NSUN5P1Q3KNT7 163 aa11.67□□□□□ -0.54
HDAC5-207ENST00000588261 ZNF429Q86V71 674 aa11.67□□□□□ -0.54
HDAC5-207ENST00000588261 OR4F17Q8NGA8 305 aa11.67□□□□□ -0.54
HDAC5-207ENST00000588261 ARPC1AQ92747 370 aa11.67□□□□□ -0.54
HDAC5-207ENST00000588261 OR4F4Q96R69 305 aa11.67□□□□□ -0.54
HDAC5-207ENST00000588261 SRSF8Q9BRL6 282 aaKnown RBP11.67□□□□□ -0.54
HDAC5-207ENST00000588261 COA4Q9NYJ1 87 aa11.67□□□□□ -0.54
HDAC5-207ENST00000588261 FKBP11Q9NYL4 201 aa11.67□□□□□ -0.54
HDAC5-207ENST00000588261 KMT2CQ8NEZ4 4911 aaKnown RBP11.66□□□□□ -0.54
HDAC5-207ENST00000588261 SH2D7A6NKC9 451 aaPredicted RBP11.66□□□□□ -0.54
HDAC5-207ENST00000588261 C15orf61A6NNL5 157 aa11.66□□□□□ -0.54
HDAC5-207ENST00000588261 ATP6V0E1O15342 81 aa11.66□□□□□ -0.54
HDAC5-207ENST00000588261 FBXO24O75426 580 aa11.66□□□□□ -0.54
HDAC5-207ENST00000588261 NDPQ00604 133 aa11.66□□□□□ -0.54
HDAC5-207ENST00000588261 TMEM267Q0VDI3 215 aaPredicted RBP11.66□□□□□ -0.54
HDAC5-207ENST00000588261 FXYD3Q14802 87 aa11.66□□□□□ -0.54
HDAC5-207ENST00000588261 AARDQ4LEZ3 155 aa11.66□□□□□ -0.54
HDAC5-207ENST00000588261 TCTEX1D4Q5JR98 221 aa11.66□□□□□ -0.54
HDAC5-207ENST00000588261 HSD17B13Q7Z5P4 300 aaPredicted RBP11.66□□□□□ -0.54
HDAC5-207ENST00000588261 STPG2Q8N412 459 aa11.66□□□□□ -0.54
HDAC5-207ENST00000588261 SLC35G3Q8N808 338 aa11.66□□□□□ -0.54
HDAC5-207ENST00000588261 OR5B3Q8NH48 314 aa11.66□□□□□ -0.54
HDAC5-207ENST00000588261 RNASE11Q8TAA1 199 aaKnown RBP11.66□□□□□ -0.54
HDAC5-207ENST00000588261 MITD1Q8WV92 249 aa11.66□□□□□ -0.54
HDAC5-207ENST00000588261 SRSF12Q8WXF0 261 aaKnown RBP11.66□□□□□ -0.54
HDAC5-207ENST00000588261 PHB2Q99623 299 aa11.66□□□□□ -0.54
HDAC5-207ENST00000588261 SPIN2AQ99865 258 aa11.66□□□□□ -0.54
HDAC5-207ENST00000588261 SPIN2BQ9BPZ2 258 aa11.66□□□□□ -0.54
HDAC5-207ENST00000588261 COMMD5Q9GZQ3 224 aa11.66□□□□□ -0.54
HDAC5-207ENST00000588261 TMEM14BQ9NUH8 114 aa11.66□□□□□ -0.54
HDAC5-207ENST00000588261 FOXA2Q9Y261 457 aaPredicted RBP11.66□□□□□ -0.54
HDAC5-207ENST00000588261 ZNF257Q9Y2Q1 563 aa11.66□□□□□ -0.54
HDAC5-207ENST00000588261 TMED3Q9Y3Q3 217 aa11.66□□□□□ -0.54
HDAC5-207ENST00000588261 INMT-MINDY4F8WBC2 141 aa11.65□□□□□ -0.54
HDAC5-207ENST00000588261 CNIH1O95406 144 aa11.65□□□□□ -0.54
HDAC5-207ENST00000588261 DHFRP00374 187 aa11.65□□□□□ -0.54
HDAC5-207ENST00000588261 SLC25A6P12236 298 aa11.65□□□□□ -0.54
HDAC5-207ENST00000588261 SLC35B1P78383 322 aa11.65□□□□□ -0.54
HDAC5-207ENST00000588261 PJVKQ0ZLH3 352 aa11.65□□□□□ -0.54
HDAC5-207ENST00000588261 TNXAQ16473 311 aa11.65□□□□□ -0.54
HDAC5-207ENST00000588261 ANKRD55Q3KP44 614 aa11.65□□□□□ -0.54
HDAC5-207ENST00000588261 AKIRIN2Q53H80 203 aa11.65□□□□□ -0.54
HDAC5-207ENST00000588261 NMSQ5H8A3 153 aa11.65□□□□□ -0.54
HDAC5-207ENST00000588261 COMMD1Q8N668 190 aa11.65□□□□□ -0.54
HDAC5-207ENST00000588261 MINDY2Q8NBR6 621 aa11.65□□□□□ -0.54
HDAC5-207ENST00000588261 OR4A16Q8NH70 328 aa11.65□□□□□ -0.54
HDAC5-207ENST00000588261 ZNF431Q8TF32 576 aaPredicted RBP11.65□□□□□ -0.54
HDAC5-207ENST00000588261 CASTOR1Q8WTX7 329 aa11.65□□□□□ -0.54
HDAC5-207ENST00000588261 CLCC1Q96S66 551 aa11.65□□□□□ -0.54
HDAC5-207ENST00000588261 GPN1Q9HCN4 374 aaPredicted RBP11.65□□□□□ -0.54
HDAC5-207ENST00000588261 PARP11Q9NR21 331 aa11.65□□□□□ -0.54
HDAC5-207ENST00000588261 AURKAIP1Q9NWT8 199 aaPredicted RBP11.65□□□□□ -0.54
HDAC5-207ENST00000588261 SNRPGP15A8MWD9 76 aa11.64□□□□□ -0.55
HDAC5-207ENST00000588261 OR9G9P0C7N8 305 aa11.64□□□□□ -0.55
HDAC5-207ENST00000588261 RPL27AP46776 148 aaKnown RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms