RNA–Protein interactions for RNA: ENST00000588228.5

NFIX-210, Transcript of nuclear factor I X, humanhuman

TSL 2 BASIC

Gene NFIX, Length 1,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-210ENST00000588228 VWC2LB2RUY7 222 aa13.34□□□□□ -0.27
NFIX-210ENST00000588228 PRH1P02810 166 aa13.34□□□□□ -0.27
NFIX-210ENST00000588228 MYOD1P15172 320 aa13.34□□□□□ -0.27
NFIX-210ENST00000588228 PAX1P15863 534 aa13.34□□□□□ -0.27
NFIX-210ENST00000588228 F2RL1P55085 397 aa13.34□□□□□ -0.27
NFIX-210ENST00000588228 RAB11AP62491 216 aa13.34□□□□□ -0.27
NFIX-210ENST00000588228 VWC2Q2TAL6 325 aa13.34□□□□□ -0.27
NFIX-210ENST00000588228 TOR2AQ5JU69 321 aa13.34□□□□□ -0.27
NFIX-210ENST00000588228 IL34Q6ZMJ4 242 aa13.34□□□□□ -0.27
NFIX-210ENST00000588228 THNSL2Q86YJ6 484 aa13.34□□□□□ -0.27
NFIX-210ENST00000588228 PSMG3Q9BT73 122 aaPredicted RBP13.34□□□□□ -0.27
NFIX-210ENST00000588228 COMMD5Q9GZQ3 224 aa13.34□□□□□ -0.27
NFIX-210ENST00000588228 UQCC1Q9NVA1 299 aa13.34□□□□□ -0.27
NFIX-210ENST00000588228 POLR3KQ9Y2Y1 108 aaPredicted RBP13.34□□□□□ -0.27
NFIX-210ENST00000588228 EPG5Q9HCE0 2579 aa13.33□□□□□ -0.28
NFIX-210ENST00000588228 UBE2L5PA0A1B0GUS4 154 aa13.33□□□□□ -0.28
NFIX-210ENST00000588228 HOXB4P17483 251 aaPredicted RBP13.33□□□□□ -0.28
NFIX-210ENST00000588228 CAMLGP49069 296 aa13.33□□□□□ -0.28
NFIX-210ENST00000588228 LDLRAD2Q5SZI1 272 aa13.33□□□□□ -0.28
NFIX-210ENST00000588228 BTNL8Q6UX41 500 aa13.33□□□□□ -0.28
NFIX-210ENST00000588228 TEX45Q8NA69 505 aa13.33□□□□□ -0.28
NFIX-210ENST00000588228 SLC24A4Q8NFF2 622 aa13.33□□□□□ -0.28
NFIX-210ENST00000588228 OR1L8Q8NGR8 309 aa13.33□□□□□ -0.28
NFIX-210ENST00000588228 TAF15Q92804 592 aaKnown RBP eCLIP13.33□□□□□ -0.28
NFIX-210ENST00000588228 RNF5Q99942 180 aa13.33□□□□□ -0.28
NFIX-210ENST00000588228 HINT2Q9BX68 163 aa13.33□□□□□ -0.28
NFIX-210ENST00000588228 HRH4Q9H3N8 390 aa13.33□□□□□ -0.28
NFIX-210ENST00000588228 RFNGQ9Y644 331 aa13.33□□□□□ -0.28
NFIX-210ENST00000588228 USP9XQ93008 2570 aaPredicted RBP13.33□□□□□ -0.28
NFIX-210ENST00000588228 DOCK11Q5JSL3 2073 aa13.33□□□□□ -0.28
NFIX-210ENST00000588228 COL12A1Q99715 3063 aa13.32□□□□□ -0.28
NFIX-210ENST00000588228 UBR5O95071 2799 aaPredicted RBP13.32□□□□□ -0.28
NFIX-210ENST00000588228 RNASEK-C17orf49H0YIS7 233 aa13.32□□□□□ -0.28
NFIX-210ENST00000588228 RRHO14718 337 aa13.32□□□□□ -0.28
NFIX-210ENST00000588228 SLC25A17O43808 307 aa13.32□□□□□ -0.28
NFIX-210ENST00000588228 ETV3LQ6ZN32 361 aa13.32□□□□□ -0.28
NFIX-210ENST00000588228 LYPD6BQ8NI32 183 aa13.32□□□□□ -0.28
NFIX-210ENST00000588228 RITA1Q96K30 269 aa13.32□□□□□ -0.28
NFIX-210ENST00000588228 GGACTQ9BVM4 153 aa13.32□□□□□ -0.28
NFIX-210ENST00000588228 NDUFA4L2Q9NRX3 87 aa13.32□□□□□ -0.28
NFIX-210ENST00000588228 INS-IGF2F8WCM5 200 aa13.31□□□□□ -0.28
NFIX-210ENST00000588228 TOX4O94842 621 aa13.31□□□□□ -0.28
NFIX-210ENST00000588228 OPN1MWP04001 364 aa13.31□□□□□ -0.28
NFIX-210ENST00000588228 OPN1MW2P0DN77 364 aa13.31□□□□□ -0.28
NFIX-210ENST00000588228 OPN1MW3P0DN78 364 aa13.31□□□□□ -0.28
NFIX-210ENST00000588228 NPY1RP25929 384 aa13.31□□□□□ -0.28
NFIX-210ENST00000588228 DVL1P1P54792 670 aaPredicted RBP13.31□□□□□ -0.28
NFIX-210ENST00000588228 ATP5IP56385 69 aaPredicted RBP13.31□□□□□ -0.28
NFIX-210ENST00000588228 DSCR9P59020 149 aa13.31□□□□□ -0.28
NFIX-210ENST00000588228 PJVKQ0ZLH3 352 aa13.31□□□□□ -0.28
NFIX-210ENST00000588228 AKR1C8PQ5T2L2 129 aa13.31□□□□□ -0.28
NFIX-210ENST00000588228 MINOS1Q5TGZ0 78 aa13.31□□□□□ -0.28
NFIX-210ENST00000588228 UQCC3Q6UW78 93 aa13.31□□□□□ -0.28
NFIX-210ENST00000588228 TMEM170AQ8WVE7 144 aa13.31□□□□□ -0.28
NFIX-210ENST00000588228 RSG1Q9BU20 258 aa13.31□□□□□ -0.28
NFIX-210ENST00000588228 ZNF430Q9H8G1 570 aaPredicted RBP13.31□□□□□ -0.28
NFIX-210ENST00000588228 MINOS1-NBL1R4GNA1 71 aa13.31□□□□□ -0.28
NFIX-210ENST00000588228 IGHV4-61A0A0C4DH41 118 aa13.31□□□□□ -0.28
NFIX-210ENST00000588228 OOSP1A8MZH6 123 aa13.31□□□□□ -0.28
NFIX-210ENST00000588228 PRSS46E5RG02 174 aa13.31□□□□□ -0.28
NFIX-210ENST00000588228 TIMM23O14925 209 aa13.31□□□□□ -0.28
NFIX-210ENST00000588228 CRYGBP07316 175 aa13.31□□□□□ -0.28
NFIX-210ENST00000588228 CD1BP29016 333 aa13.31□□□□□ -0.28
NFIX-210ENST00000588228 FHITP49789 147 aa13.31□□□□□ -0.28
NFIX-210ENST00000588228 SERF2P84101 59 aa13.31□□□□□ -0.28
NFIX-210ENST00000588228 ZNF616Q08AN1 781 aa13.31□□□□□ -0.28
NFIX-210ENST00000588228 HABP2Q14520 560 aaPredicted RBP13.31□□□□□ -0.28
NFIX-210ENST00000588228 DPPA3Q6W0C5 159 aa13.31□□□□□ -0.28
NFIX-210ENST00000588228 FAM213BQ8TBF2 198 aa13.31□□□□□ -0.28
NFIX-210ENST00000588228 PERPQ96FX8 193 aa13.31□□□□□ -0.28
NFIX-210ENST00000588228 FBXO7Q9Y3I1 522 aa13.31□□□□□ -0.28
NFIX-210ENST00000588228 TIMM9Q9Y5J7 89 aa13.31□□□□□ -0.28
NFIX-210ENST00000588228 FLNCQ14315 2725 aa13.3□□□□□ -0.28
NFIX-210ENST00000588228 A0A1W2PN81 502 aa13.3□□□□□ -0.28
NFIX-210ENST00000588228 FAM157AC9JC47 383 aa13.3□□□□□ -0.28
NFIX-210ENST00000588228 IFNA4P05014 189 aa13.3□□□□□ -0.28
NFIX-210ENST00000588228 CHRNA7P36544 502 aa13.3□□□□□ -0.28
NFIX-210ENST00000588228 PSG5Q15238 335 aa13.3□□□□□ -0.28
NFIX-210ENST00000588228 CCDC144NLQ6NUI1 221 aa13.3□□□□□ -0.28
NFIX-210ENST00000588228 LHFPL4Q7Z7J7 247 aa13.3□□□□□ -0.28
NFIX-210ENST00000588228 CENPVQ7Z7K6 275 aaPredicted RBP13.3□□□□□ -0.28
NFIX-210ENST00000588228 CFHR4Q92496 578 aa13.3□□□□□ -0.28
NFIX-210ENST00000588228 VENTXO95231 258 aa13.29□□□□□ -0.28
NFIX-210ENST00000588228 CA2P00918 260 aa13.29□□□□□ -0.28
NFIX-210ENST00000588228 MDKP21741 143 aaPredicted RBP13.29□□□□□ -0.28
NFIX-210ENST00000588228 LGALS4P56470 323 aa13.29□□□□□ -0.28
NFIX-210ENST00000588228 DLK1P80370 383 aa13.29□□□□□ -0.28
NFIX-210ENST00000588228 MRGPRG-AS1Q2M3A8 158 aa13.29□□□□□ -0.28
NFIX-210ENST00000588228 BSXQ3C1V8 233 aa13.29□□□□□ -0.28
NFIX-210ENST00000588228 MMD2Q8IY49 270 aa13.29□□□□□ -0.28
NFIX-210ENST00000588228 TBX15Q96SF7 602 aa13.29□□□□□ -0.28
NFIX-210ENST00000588228 TPSG1Q9NRR2 321 aa13.29□□□□□ -0.28
NFIX-210ENST00000588228 HILPDAQ9Y5L2 63 aa13.29□□□□□ -0.28
NFIX-210ENST00000588228 IGHV4-30-2A0A087WSY4 118 aa13.28□□□□□ -0.28
NFIX-210ENST00000588228 A0A1W2PRD5 423 aa13.28□□□□□ -0.28
NFIX-210ENST00000588228 A0A1W2PRF3 423 aa13.28□□□□□ -0.28
NFIX-210ENST00000588228 A0A1W2PRM7 423 aa13.28□□□□□ -0.28
NFIX-210ENST00000588228 KRBOX1C9JBD0 128 aa13.28□□□□□ -0.28
NFIX-210ENST00000588228 TSPAN15O95858 294 aa13.28□□□□□ -0.28
NFIX-210ENST00000588228 ZP3P21754 424 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms