RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 DOCK11Q5JSL3 2073 aa12.03□□□□□ -0.48
CCDC43-203ENST00000588210 CD55P08174 381 aa12.03□□□□□ -0.48
CCDC43-203ENST00000588210 ADIRFQ15847 76 aa12.03□□□□□ -0.48
CCDC43-203ENST00000588210 TMEM241Q24JQ0 296 aa12.03□□□□□ -0.48
CCDC43-203ENST00000588210 FAM53AQ6NSI3 398 aaPredicted RBP12.03□□□□□ -0.48
CCDC43-203ENST00000588210 OR10G9Q8NGN4 311 aa12.03□□□□□ -0.48
CCDC43-203ENST00000588210 OR10G7Q8NGN6 311 aa12.03□□□□□ -0.48
CCDC43-203ENST00000588210 PYGO2Q9BRQ0 406 aa12.03□□□□□ -0.48
CCDC43-203ENST00000588210 ACTR3CQ9C0K3 210 aaPredicted RBP12.03□□□□□ -0.48
CCDC43-203ENST00000588210 VPS13CQ709C8 3753 aa12.03□□□□□ -0.48
CCDC43-203ENST00000588210 IFNL4K9M1U5 179 aa12.02□□□□□ -0.48
CCDC43-203ENST00000588210 MDKP21741 143 aaPredicted RBP12.02□□□□□ -0.48
CCDC43-203ENST00000588210 GABRA2P47869 451 aa12.02□□□□□ -0.48
CCDC43-203ENST00000588210 FFAR4Q5NUL3 377 aa12.02□□□□□ -0.48
CCDC43-203ENST00000588210 GFI1BQ5VTD9 330 aa12.02□□□□□ -0.48
CCDC43-203ENST00000588210 WDR82Q6UXN9 313 aa12.02□□□□□ -0.48
CCDC43-203ENST00000588210 Q6ZR03 302 aa12.02□□□□□ -0.48
CCDC43-203ENST00000588210 H2BFWTQ7Z2G1 175 aa12.02□□□□□ -0.48
CCDC43-203ENST00000588210 C16orf82Q7Z2V1 217 aa12.02□□□□□ -0.48
CCDC43-203ENST00000588210 OR10D4PQ8NGN7 298 aa12.02□□□□□ -0.48
CCDC43-203ENST00000588210 MRGPRDQ8TDS7 321 aa12.02□□□□□ -0.48
CCDC43-203ENST00000588210 DIRC2Q96SL1 478 aa12.02□□□□□ -0.48
CCDC43-203ENST00000588210 HSD17B10Q99714 261 aaKnown RBP12.02□□□□□ -0.48
CCDC43-203ENST00000588210 NPCDR1Q9BY65 106 aa12.02□□□□□ -0.48
CCDC43-203ENST00000588210 GPR61Q9BZJ8 451 aa12.02□□□□□ -0.48
CCDC43-203ENST00000588210 MYO9AB2RTY4 2548 aa12.02□□□□□ -0.49
CCDC43-203ENST00000588210 ZNF729A6NN14 1252 aaPredicted RBP12.02□□□□□ -0.49
CCDC43-203ENST00000588210 ADH4P08319 380 aa12.02□□□□□ -0.49
CCDC43-203ENST00000588210 DSCR9P59020 149 aa12.02□□□□□ -0.49
CCDC43-203ENST00000588210 RPL23P62829 140 aaKnown RBP12.02□□□□□ -0.49
CCDC43-203ENST00000588210 PAX5Q02548 391 aa12.02□□□□□ -0.49
CCDC43-203ENST00000588210 BSXQ3C1V8 233 aa12.02□□□□□ -0.49
CCDC43-203ENST00000588210 BTNL3Q6UXE8 466 aa12.02□□□□□ -0.49
CCDC43-203ENST00000588210 OR10A7Q8NGE5 316 aa12.02□□□□□ -0.49
CCDC43-203ENST00000588210 ZDHHC16Q969W1 377 aa12.02□□□□□ -0.49
CCDC43-203ENST00000588210 SRD5A3Q9H8P0 318 aa12.02□□□□□ -0.49
CCDC43-203ENST00000588210 CREBBPQ92793 2442 aa12.02□□□□□ -0.49
CCDC43-203ENST00000588210 PFN1P07737 140 aaKnown RBP12.01□□□□□ -0.49
CCDC43-203ENST00000588210 GNB2P62879 340 aa12.01□□□□□ -0.49
CCDC43-203ENST00000588210 CLEC12BQ2HXU8 276 aa12.01□□□□□ -0.49
CCDC43-203ENST00000588210 SMIM21Q3B7S5 101 aa12.01□□□□□ -0.49
CCDC43-203ENST00000588210 PRAMEF6Q5VXH4 476 aa12.01□□□□□ -0.49
CCDC43-203ENST00000588210 TRAT1Q6PIZ9 186 aa12.01□□□□□ -0.49
CCDC43-203ENST00000588210 TGIF2LYQ8IUE0 185 aa12.01□□□□□ -0.49
CCDC43-203ENST00000588210 WFDC11Q8NEX6 87 aa12.01□□□□□ -0.49
CCDC43-203ENST00000588210 PARLQ9H300 379 aa12.01□□□□□ -0.49
CCDC43-203ENST00000588210 MSL2Q9HCI7 577 aa12.01□□□□□ -0.49
CCDC43-203ENST00000588210 MAST4O15021 2626 aa12.01□□□□□ -0.49
CCDC43-203ENST00000588210 IGHV1-46P01743 117 aa12.01□□□□□ -0.49
CCDC43-203ENST00000588210 SSTR5P35346 364 aa12.01□□□□□ -0.49
CCDC43-203ENST00000588210 COL10A1Q03692 680 aa12.01□□□□□ -0.49
CCDC43-203ENST00000588210 ZNF709Q8N972 641 aa12.01□□□□□ -0.49
CCDC43-203ENST00000588210 ZNF383Q8NA42 475 aa12.01□□□□□ -0.49
CCDC43-203ENST00000588210 OR13A1Q8NGR1 328 aa12.01□□□□□ -0.49
CCDC43-203ENST00000588210 RPUSD4Q96CM3 377 aaKnown RBP12.01□□□□□ -0.49
CCDC43-203ENST00000588210 OTOGQ6ZRI0 2925 aa12□□□□□ -0.49
CCDC43-203ENST00000588210 LINC00473A8K010 186 aa12□□□□□ -0.49
CCDC43-203ENST00000588210 C17orf112F2Z3M2 114 aa12□□□□□ -0.49
CCDC43-203ENST00000588210 HMGB3O15347 200 aaKnown RBP12□□□□□ -0.49
CCDC43-203ENST00000588210 SPRY3O43610 288 aa12□□□□□ -0.49
CCDC43-203ENST00000588210 LY6HO94772 140 aa12□□□□□ -0.49
CCDC43-203ENST00000588210 HTD2P86397 168 aa12□□□□□ -0.49
CCDC43-203ENST00000588210 Q3ZCU0 254 aa12□□□□□ -0.49
CCDC43-203ENST00000588210 AARDQ4LEZ3 155 aa12□□□□□ -0.49
CCDC43-203ENST00000588210 CDPF1Q6NVV7 123 aa12□□□□□ -0.49
CCDC43-203ENST00000588210 CLEC2AQ6UVW9 174 aa12□□□□□ -0.49
CCDC43-203ENST00000588210 RAB24Q969Q5 203 aa12□□□□□ -0.49
CCDC43-203ENST00000588210 Q96MF0 132 aa12□□□□□ -0.49
CCDC43-203ENST00000588210 ZMAT5Q9UDW3 170 aaKnown RBP12□□□□□ -0.49
CCDC43-203ENST00000588210 METRNQ9UJH8 293 aa12□□□□□ -0.49
CCDC43-203ENST00000588210 PITPNC1Q9UKF7 332 aa12□□□□□ -0.49
CCDC43-203ENST00000588210 TRBV23-1A0A0A0MS06 115 aa11.99□□□□□ -0.49
CCDC43-203ENST00000588210 MARCH11A6NNE9 402 aa11.99□□□□□ -0.49
CCDC43-203ENST00000588210 C15orf65H3BRN8 121 aa11.99□□□□□ -0.49
CCDC43-203ENST00000588210 H7BYZ3 331 aa11.99□□□□□ -0.49
CCDC43-203ENST00000588210 GATCO43716 136 aaKnown RBP11.99□□□□□ -0.49
CCDC43-203ENST00000588210 LY86O95711 162 aa11.99□□□□□ -0.49
CCDC43-203ENST00000588210 CCL8P80075 99 aa11.99□□□□□ -0.49
CCDC43-203ENST00000588210 HOXA4Q00056 320 aaPredicted RBP11.99□□□□□ -0.49
CCDC43-203ENST00000588210 HNF4GQ14541 408 aa11.99□□□□□ -0.49
CCDC43-203ENST00000588210 OR4F5Q8NH21 305 aa11.99□□□□□ -0.49
CCDC43-203ENST00000588210 OR4X1Q8NH49 305 aa11.99□□□□□ -0.49
CCDC43-203ENST00000588210 FAM216AQ8WUB2 273 aa11.99□□□□□ -0.49
CCDC43-203ENST00000588210 SNX22Q96L94 193 aa11.99□□□□□ -0.49
CCDC43-203ENST00000588210 OR4F4Q96R69 305 aa11.99□□□□□ -0.49
CCDC43-203ENST00000588210 PFDN5Q99471 154 aa11.99□□□□□ -0.49
CCDC43-203ENST00000588210 A0A1B0GWJ7 208 aa11.99□□□□□ -0.49
CCDC43-203ENST00000588210 SMCO3A2RU48 225 aa11.99□□□□□ -0.49
CCDC43-203ENST00000588210 FAM90A9PA6NNJ1 464 aa11.99□□□□□ -0.49
CCDC43-203ENST00000588210 C15orf62A8K5M9 175 aa11.99□□□□□ -0.49
CCDC43-203ENST00000588210 ST8SIA5O15466 376 aa11.99□□□□□ -0.49
CCDC43-203ENST00000588210 TFF1P04155 84 aa11.99□□□□□ -0.49
CCDC43-203ENST00000588210 HIST1H1BP16401 226 aaKnown RBP11.99□□□□□ -0.49
CCDC43-203ENST00000588210 TNFSF4P23510 183 aa11.99□□□□□ -0.49
CCDC43-203ENST00000588210 PDLIM4P50479 330 aa11.99□□□□□ -0.49
CCDC43-203ENST00000588210 MRPS11P82912 194 aaKnown RBP11.99□□□□□ -0.49
CCDC43-203ENST00000588210 PDZD11Q5EBL8 140 aa11.99□□□□□ -0.49
CCDC43-203ENST00000588210 OR2Z1Q8NG97 314 aa11.99□□□□□ -0.49
CCDC43-203ENST00000588210 OR51G1Q8NGK1 321 aa11.99□□□□□ -0.49
CCDC43-203ENST00000588210 GATAD1Q8WUU5 269 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms