RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 MSGN1A6NI15 193 aa8.41□□□□□ -1.06
SMARCA4-213ENST00000587988 AP4M1O00189 453 aa8.41□□□□□ -1.06
SMARCA4-213ENST00000587988 APELAP0DMC3 54 aa8.41□□□□□ -1.06
SMARCA4-213ENST00000587988 HLA-GP17693 338 aa8.41□□□□□ -1.06
SMARCA4-213ENST00000587988 CRIP2P52943 208 aaPredicted RBP8.41□□□□□ -1.06
SMARCA4-213ENST00000587988 SRSF4Q08170 494 aaKnown RBP8.41□□□□□ -1.06
SMARCA4-213ENST00000587988 ECSCRQ19T08 205 aa8.41□□□□□ -1.06
SMARCA4-213ENST00000587988 ASPHD1Q5U4P2 390 aa8.41□□□□□ -1.06
SMARCA4-213ENST00000587988 PLET1Q6UQ28 207 aa8.41□□□□□ -1.06
SMARCA4-213ENST00000587988 ZNF329Q86UD4 541 aa8.41□□□□□ -1.06
SMARCA4-213ENST00000587988 LGI3Q8N145 548 aa8.41□□□□□ -1.06
SMARCA4-213ENST00000587988 LRTM2Q8N967 370 aa8.41□□□□□ -1.06
SMARCA4-213ENST00000587988 LFNGQ8NES3 379 aa8.41□□□□□ -1.06
SMARCA4-213ENST00000587988 SGMS2Q8NHU3 365 aa8.41□□□□□ -1.06
SMARCA4-213ENST00000587988 WIPF2Q8TF74 440 aaPredicted RBP8.41□□□□□ -1.06
SMARCA4-213ENST00000587988 ABHD5Q8WTS1 349 aa8.41□□□□□ -1.06
SMARCA4-213ENST00000587988 SRSF12Q8WXF0 261 aaKnown RBP8.41□□□□□ -1.06
SMARCA4-213ENST00000587988 IL22RA2Q969J5 263 aa8.41□□□□□ -1.06
SMARCA4-213ENST00000587988 MARVELD1Q9BSK0 173 aa8.41□□□□□ -1.06
SMARCA4-213ENST00000587988 ATRQ13535 2644 aa8.4□□□□□ -1.06
SMARCA4-213ENST00000587988 TRAV41A0A0B4J266 112 aa8.4□□□□□ -1.06
SMARCA4-213ENST00000587988 A0A0B4J2A0 478 aa8.4□□□□□ -1.06
SMARCA4-213ENST00000587988 TEX50A0A1B0GTY4 177 aa8.4□□□□□ -1.06
SMARCA4-213ENST00000587988 HMX3A6NHT5 357 aa8.4□□□□□ -1.06
SMARCA4-213ENST00000587988 C15orf61A6NNL5 157 aa8.4□□□□□ -1.06
SMARCA4-213ENST00000587988 TEX22C9J3V5 150 aa8.4□□□□□ -1.06
SMARCA4-213ENST00000587988 INMT-MINDY4F8WBC2 141 aa8.4□□□□□ -1.06
SMARCA4-213ENST00000587988 CREBL2O60519 120 aaPredicted RBP8.4□□□□□ -1.06
SMARCA4-213ENST00000587988 SNAPC5O75971 98 aa8.4□□□□□ -1.06
SMARCA4-213ENST00000587988 ACTL6BO94805 426 aa8.4□□□□□ -1.06
SMARCA4-213ENST00000587988 ATG12O94817 140 aa8.4□□□□□ -1.06
SMARCA4-213ENST00000587988 DUS4LO95620 317 aaKnown RBP8.4□□□□□ -1.06
SMARCA4-213ENST00000587988 PTTG1O95997 202 aa8.4□□□□□ -1.06
SMARCA4-213ENST00000587988 MAS1LP35410 378 aa8.4□□□□□ -1.06
SMARCA4-213ENST00000587988 RPL27AP46776 148 aaKnown RBP8.4□□□□□ -1.06
SMARCA4-213ENST00000587988 SRPXP78539 464 aa8.4□□□□□ -1.06
SMARCA4-213ENST00000587988 CFHR3Q02985 330 aa8.4□□□□□ -1.06
SMARCA4-213ENST00000587988 KRTAP21-3Q3LHN1 58 aa8.4□□□□□ -1.06
SMARCA4-213ENST00000587988 C19orf54Q5BKX5 351 aa8.4□□□□□ -1.06
SMARCA4-213ENST00000587988 UNQ5815/PRO19632Q6UWF5 114 aa8.4□□□□□ -1.06
SMARCA4-213ENST00000587988 CENPVQ7Z7K6 275 aaPredicted RBP8.4□□□□□ -1.06
SMARCA4-213ENST00000587988 OR4A16Q8NH70 328 aa8.4□□□□□ -1.06
SMARCA4-213ENST00000587988 RNASE11Q8TAA1 199 aaKnown RBP8.4□□□□□ -1.06
SMARCA4-213ENST00000587988 CHPT1Q8WUD6 406 aa8.4□□□□□ -1.06
SMARCA4-213ENST00000587988 WFDC12Q8WWY7 111 aa8.4□□□□□ -1.06
SMARCA4-213ENST00000587988 LSM10Q969L4 123 aaKnown RBP8.4□□□□□ -1.06
SMARCA4-213ENST00000587988 RRNAD1Q96FB5 475 aaKnown RBP8.4□□□□□ -1.06
SMARCA4-213ENST00000587988 QTRT1Q9BXR0 403 aaKnown RBP8.4□□□□□ -1.06
SMARCA4-213ENST00000587988 TMEM14BQ9NUH8 114 aa8.4□□□□□ -1.06
SMARCA4-213ENST00000587988 SHPKQ9UHJ6 478 aa8.4□□□□□ -1.06
SMARCA4-213ENST00000587988 ZNF580Q9UK33 172 aa8.4□□□□□ -1.06
SMARCA4-213ENST00000587988 PSMB11A5LHX3 300 aa8.39□□□□□ -1.07
SMARCA4-213ENST00000587988 SOX15O60248 233 aa8.39□□□□□ -1.07
SMARCA4-213ENST00000587988 ADAP1O75689 374 aa8.39□□□□□ -1.07
SMARCA4-213ENST00000587988 IL5P05113 134 aa8.39□□□□□ -1.07
SMARCA4-213ENST00000587988 HOXB5P09067 269 aa8.39□□□□□ -1.07
SMARCA4-213ENST00000587988 VDAC1P21796 283 aa8.39□□□□□ -1.07
SMARCA4-213ENST00000587988 PPIFP30405 207 aaKnown RBP8.39□□□□□ -1.07
SMARCA4-213ENST00000587988 NMSQ5H8A3 153 aa8.39□□□□□ -1.07
SMARCA4-213ENST00000587988 TCTEX1D4Q5JR98 221 aa8.39□□□□□ -1.07
SMARCA4-213ENST00000587988 GGNBP1Q5YKI7 109 aa8.39□□□□□ -1.07
SMARCA4-213ENST00000587988 FAM219AQ8IW50 185 aa8.39□□□□□ -1.07
SMARCA4-213ENST00000587988 C11orf44Q8N8P7 122 aa8.39□□□□□ -1.07
SMARCA4-213ENST00000587988 OR5T1Q8NG75 326 aa8.39□□□□□ -1.07
SMARCA4-213ENST00000587988 OR5AU1Q8NGC0 362 aa8.39□□□□□ -1.07
SMARCA4-213ENST00000587988 ZNF431Q8TF32 576 aaPredicted RBP8.39□□□□□ -1.07
SMARCA4-213ENST00000587988 MITD1Q8WV92 249 aa8.39□□□□□ -1.07
SMARCA4-213ENST00000587988 FYTTD1Q96QD9 318 aaKnown RBP8.39□□□□□ -1.07
SMARCA4-213ENST00000587988 PHB2Q99623 299 aa8.39□□□□□ -1.07
SMARCA4-213ENST00000587988 COMMD5Q9GZQ3 224 aa8.39□□□□□ -1.07
SMARCA4-213ENST00000587988 NDUFA4L2Q9NRX3 87 aa8.39□□□□□ -1.07
SMARCA4-213ENST00000587988 CACNG5Q9UF02 275 aa8.39□□□□□ -1.07
SMARCA4-213ENST00000587988 PRNDQ9UKY0 176 aa8.39□□□□□ -1.07
SMARCA4-213ENST00000587988 FOXA2Q9Y261 457 aaPredicted RBP8.39□□□□□ -1.07
SMARCA4-213ENST00000587988 OR51B2Q9Y5P1 312 aa8.39□□□□□ -1.07
SMARCA4-213ENST00000587988 A0A1W2PN81 502 aa8.38□□□□□ -1.07
SMARCA4-213ENST00000587988 DUXBA0A1W2PPF3 345 aa8.38□□□□□ -1.07
SMARCA4-213ENST00000587988 MPTX1A8MV57 137 aa8.38□□□□□ -1.07
SMARCA4-213ENST00000587988 ST8SIA3O43173 380 aa8.38□□□□□ -1.07
SMARCA4-213ENST00000587988 RBMXL2O75526 392 aaKnown RBP8.38□□□□□ -1.07
SMARCA4-213ENST00000587988 FGF2P09038 288 aa8.38□□□□□ -1.07
SMARCA4-213ENST00000587988 CD28P10747 220 aa8.38□□□□□ -1.07
SMARCA4-213ENST00000587988 CHRNA7P36544 502 aa8.38□□□□□ -1.07
SMARCA4-213ENST00000587988 TMEM267Q0VDI3 215 aaPredicted RBP8.38□□□□□ -1.07
SMARCA4-213ENST00000587988 RGS21Q2M5E4 152 aa8.38□□□□□ -1.07
SMARCA4-213ENST00000587988 AKIRIN2Q53H80 203 aa8.38□□□□□ -1.07
SMARCA4-213ENST00000587988 SPINK9Q5DT21 86 aa8.38□□□□□ -1.07
SMARCA4-213ENST00000587988 C12orf54Q6X4T0 127 aa8.38□□□□□ -1.07
SMARCA4-213ENST00000587988 LCNL1Q6ZST4 164 aa8.38□□□□□ -1.07
SMARCA4-213ENST00000587988 MINDY2Q8NBR6 621 aa8.38□□□□□ -1.07
SMARCA4-213ENST00000587988 OR10W1Q8NGF6 305 aa8.38□□□□□ -1.07
SMARCA4-213ENST00000587988 OR1L8Q8NGR8 309 aa8.38□□□□□ -1.07
SMARCA4-213ENST00000587988 COQ8AQ8NI60 647 aa8.38□□□□□ -1.07
SMARCA4-213ENST00000587988 NXPH3O95157 252 aa8.37□□□□□ -1.07
SMARCA4-213ENST00000587988 DHFRP00374 187 aa8.37□□□□□ -1.07
SMARCA4-213ENST00000587988 IGHG4P01861 327 aa8.37□□□□□ -1.07
SMARCA4-213ENST00000587988 REG1AP05451 166 aa8.37□□□□□ -1.07
SMARCA4-213ENST00000587988 TRAPPC2P0DI81 140 aa8.37□□□□□ -1.07
SMARCA4-213ENST00000587988 TRAPPC2BP0DI82 140 aa8.37□□□□□ -1.07
SMARCA4-213ENST00000587988 AREGP15514 252 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms