RNA–Protein interactions for RNA: ENST00000587486.6

CALR-205, Transcript of calreticulin, humanhuman

TSL 2

Gene CALR, Length 957 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-205ENST00000587486 FCAMRQ8WWV6 532 aa12.84□□□□□ -0.35
CALR-205ENST00000587486 DGCR14Q96DF8 476 aaKnown RBP12.84□□□□□ -0.35
CALR-205ENST00000587486 OR4C12Q96R67 309 aa12.84□□□□□ -0.35
CALR-205ENST00000587486 HRASLSQ9HDD0 168 aa12.84□□□□□ -0.35
CALR-205ENST00000587486 AKIP1Q9NQ31 210 aa12.84□□□□□ -0.35
CALR-205ENST00000587486 SLC2A9Q9NRM0 540 aa12.84□□□□□ -0.35
CALR-205ENST00000587486 TMEM140Q9NV12 185 aa12.84□□□□□ -0.35
CALR-205ENST00000587486 ZNF257Q9Y2Q1 563 aa12.84□□□□□ -0.35
CALR-205ENST00000587486 CEPT1Q9Y6K0 416 aa12.84□□□□□ -0.35
CALR-205ENST00000587486 COL7A1Q02388 2944 aa12.84□□□□□ -0.35
CALR-205ENST00000587486 FAM223BA6NKX1 122 aa12.83□□□□□ -0.36
CALR-205ENST00000587486 MARCH11A6NNE9 402 aa12.83□□□□□ -0.36
CALR-205ENST00000587486 GABARAPH6UMI1 98 aa12.83□□□□□ -0.36
CALR-205ENST00000587486 UPK2O00526 184 aa12.83□□□□□ -0.36
CALR-205ENST00000587486 RGS5O15539 181 aa12.83□□□□□ -0.36
CALR-205ENST00000587486 NOL3O60936 208 aaKnown RBP12.83□□□□□ -0.36
CALR-205ENST00000587486 SAP30O75446 220 aa12.83□□□□□ -0.36
CALR-205ENST00000587486 CRYGCP07315 174 aa12.83□□□□□ -0.36
CALR-205ENST00000587486 AREGP15514 252 aa12.83□□□□□ -0.36
CALR-205ENST00000587486 OR2B8PP59922 312 aa12.83□□□□□ -0.36
CALR-205ENST00000587486 RHOGP84095 191 aa12.83□□□□□ -0.36
CALR-205ENST00000587486 PHLDA2Q53GA4 152 aa12.83□□□□□ -0.36
CALR-205ENST00000587486 ACSM6Q6P461 480 aa12.83□□□□□ -0.36
CALR-205ENST00000587486 FAM223AQ8IWN6 122 aa12.83□□□□□ -0.36
CALR-205ENST00000587486 ARRDC1Q8N5I2 433 aa12.83□□□□□ -0.36
CALR-205ENST00000587486 OR4D10Q8NGI6 311 aa12.83□□□□□ -0.36
CALR-205ENST00000587486 NXF2Q9GZY0 626 aaKnown RBP12.83□□□□□ -0.36
CALR-205ENST00000587486 FAM212BQ9NTI7 297 aaPredicted RBP12.83□□□□□ -0.36
CALR-205ENST00000587486 IGLC7A0M8Q6 106 aa12.82□□□□□ -0.36
CALR-205ENST00000587486 IFNA6P05013 189 aa12.82□□□□□ -0.36
CALR-205ENST00000587486 CTRB1P17538 263 aa12.82□□□□□ -0.36
CALR-205ENST00000587486 ERVK-16P61578 105 aa12.82□□□□□ -0.36
CALR-205ENST00000587486 RNASE10Q5GAN6 216 aaKnown RBP12.82□□□□□ -0.36
CALR-205ENST00000587486 CTRB2Q6GPI1 263 aa12.82□□□□□ -0.36
CALR-205ENST00000587486 SLC38A6Q8IZM9 456 aa12.82□□□□□ -0.36
CALR-205ENST00000587486 TMEM229BQ8NBD8 167 aa12.82□□□□□ -0.36
CALR-205ENST00000587486 DMBX1Q8NFW5 382 aa12.82□□□□□ -0.36
CALR-205ENST00000587486 SMIM4Q8WVI0 70 aa12.82□□□□□ -0.36
CALR-205ENST00000587486 MRGPRFQ96AM1 343 aa12.82□□□□□ -0.36
CALR-205ENST00000587486 FANCD2OSQ96PS1 177 aa12.82□□□□□ -0.36
CALR-205ENST00000587486 RBM38Q9H0Z9 239 aaKnown RBP12.82□□□□□ -0.36
CALR-205ENST00000587486 PEF1Q9UBV8 284 aaKnown RBP12.82□□□□□ -0.36
CALR-205ENST00000587486 DNAH9Q9NYC9 4486 aa12.82□□□□□ -0.36
CALR-205ENST00000587486 ANKRD34BA5PLL1 514 aa12.81□□□□□ -0.36
CALR-205ENST00000587486 CTDSPLO15194 276 aa12.81□□□□□ -0.36
CALR-205ENST00000587486 CYB5BO43169 146 aa12.81□□□□□ -0.36
CALR-205ENST00000587486 LY86O95711 162 aa12.81□□□□□ -0.36
CALR-205ENST00000587486 PTBP1P26599 531 aaKnown RBP eCLIP12.81□□□□□ -0.36
CALR-205ENST00000587486 PSMB6P28072 239 aa12.81□□□□□ -0.36
CALR-205ENST00000587486 LPAR6P43657 344 aa12.81□□□□□ -0.36
CALR-205ENST00000587486 MRPS10P82664 201 aaKnown RBP12.81□□□□□ -0.36
CALR-205ENST00000587486 SSBP1Q04837 148 aaKnown RBP12.81□□□□□ -0.36
CALR-205ENST00000587486 ATP5G2Q06055 141 aa12.81□□□□□ -0.36
CALR-205ENST00000587486 KLF5Q13887 457 aaPredicted RBP12.81□□□□□ -0.36
CALR-205ENST00000587486 TBC1D26Q86UD7 250 aa12.81□□□□□ -0.36
CALR-205ENST00000587486 NECAP1Q8NC96 275 aa12.81□□□□□ -0.36
CALR-205ENST00000587486 OR6Q1Q8NGQ2 317 aa12.81□□□□□ -0.36
CALR-205ENST00000587486 FYTTD1Q96QD9 318 aaKnown RBP12.81□□□□□ -0.36
CALR-205ENST00000587486 SOSTQ9BQB4 213 aa12.81□□□□□ -0.36
CALR-205ENST00000587486 ZNF256Q9Y2P7 627 aaPredicted RBP12.81□□□□□ -0.36
CALR-205ENST00000587486 DMRT1Q9Y5R6 373 aa12.81□□□□□ -0.36
CALR-205ENST00000587486 IGKV1-39P01597 117 aa12.8□□□□□ -0.36
CALR-205ENST00000587486 IGKV1D-39P04432 117 aa12.8□□□□□ -0.36
CALR-205ENST00000587486 TAS2R19P59542 299 aa12.8□□□□□ -0.36
CALR-205ENST00000587486 RND3P61587 244 aa12.8□□□□□ -0.36
CALR-205ENST00000587486 CD69Q07108 199 aa12.8□□□□□ -0.36
CALR-205ENST00000587486 EXOSC2Q13868 293 aaKnown RBP12.8□□□□□ -0.36
CALR-205ENST00000587486 SRSF8Q9BRL6 282 aaKnown RBP12.8□□□□□ -0.36
CALR-205ENST00000587486 COMMD5Q9GZQ3 224 aa12.8□□□□□ -0.36
CALR-205ENST00000587486 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.79□□□□□ -0.36
CALR-205ENST00000587486 BMPR1BO00238 502 aa12.79□□□□□ -0.36
CALR-205ENST00000587486 OR2J3O76001 311 aa12.79□□□□□ -0.36
CALR-205ENST00000587486 DEFA4P12838 97 aa12.79□□□□□ -0.36
CALR-205ENST00000587486 RPA2P15927 270 aa12.79□□□□□ -0.36
CALR-205ENST00000587486 HIST1H1BP16401 226 aaKnown RBP12.79□□□□□ -0.36
CALR-205ENST00000587486 G6PCP35575 357 aa12.79□□□□□ -0.36
CALR-205ENST00000587486 RPEL1Q2QD12 228 aa12.79□□□□□ -0.36
CALR-205ENST00000587486 C15orf32Q32M92 178 aa12.79□□□□□ -0.36
CALR-205ENST00000587486 IL34Q6ZMJ4 242 aa12.79□□□□□ -0.36
CALR-205ENST00000587486 DIRAS2Q96HU8 199 aa12.79□□□□□ -0.36
CALR-205ENST00000587486 PRR25Q96S07 402 aa12.79□□□□□ -0.36
CALR-205ENST00000587486 C6orf62Q9GZU0 229 aaPredicted RBP12.79□□□□□ -0.36
CALR-205ENST00000587486 RABL2AQ9UBK7 228 aaPredicted RBP12.79□□□□□ -0.36
CALR-205ENST00000587486 RABL2BQ9UNT1 228 aa12.79□□□□□ -0.36
CALR-205ENST00000587486 LSM4Q9Y4Z0 139 aaKnown RBP12.79□□□□□ -0.36
CALR-205ENST00000587486 IGLV11-55A0A075B6I3 123 aa12.78□□□□□ -0.36
CALR-205ENST00000587486 KRASP01116 189 aa12.78□□□□□ -0.36
CALR-205ENST00000587486 REG1AP05451 166 aa12.78□□□□□ -0.36
CALR-205ENST00000587486 THOC7Q6I9Y2 204 aaKnown RBP12.78□□□□□ -0.36
CALR-205ENST00000587486 STEAP1BQ6NZ63 245 aa12.78□□□□□ -0.36
CALR-205ENST00000587486 ZNF486Q96H40 463 aaPredicted RBP12.78□□□□□ -0.36
CALR-205ENST00000587486 SEC22AQ96IW7 307 aa12.78□□□□□ -0.36
CALR-205ENST00000587486 CCDC140Q96MF4 163 aa12.78□□□□□ -0.36
CALR-205ENST00000587486 QTRT1Q9BXR0 403 aaKnown RBP12.78□□□□□ -0.36
CALR-205ENST00000587486 NDUFA4L2Q9NRX3 87 aa12.78□□□□□ -0.36
CALR-205ENST00000587486 TEX50A0A1B0GTY4 177 aa12.77□□□□□ -0.37
CALR-205ENST00000587486 DBX1A6NMT0 343 aa12.77□□□□□ -0.37
CALR-205ENST00000587486 GSTZ1O43708 216 aaPredicted RBP12.77□□□□□ -0.37
CALR-205ENST00000587486 SNAPC5O75971 98 aa12.77□□□□□ -0.37
CALR-205ENST00000587486 RAB3DO95716 219 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms