RNA–Protein interactions for RNA: ENST00000585543.6

GFAP-205, Transcript of glial fibrillary acidic protein, humanhuman

TSL 1 (best)

Gene GFAP, Length 594 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-205ENST00000585543 RAB25P57735 213 aa13.16□□□□□ -0.3
GFAP-205ENST00000585543 KRTAP10-3P60369 221 aa13.16□□□□□ -0.3
GFAP-205ENST00000585543 FAM219AQ8IW50 185 aa13.16□□□□□ -0.3
GFAP-205ENST00000585543 MRPL41Q8IXM3 137 aaKnown RBP13.16□□□□□ -0.3
GFAP-205ENST00000585543 ENKURQ8TC29 256 aa13.16□□□□□ -0.3
GFAP-205ENST00000585543 WIPF2Q8TF74 440 aaPredicted RBP13.16□□□□□ -0.3
GFAP-205ENST00000585543 TMEM230Q96A57 120 aa13.16□□□□□ -0.3
GFAP-205ENST00000585543 SEC22AQ96IW7 307 aa13.16□□□□□ -0.3
GFAP-205ENST00000585543 FYTTD1Q96QD9 318 aaKnown RBP13.16□□□□□ -0.3
GFAP-205ENST00000585543 CITED2Q99967 270 aaPredicted RBP13.16□□□□□ -0.3
GFAP-205ENST00000585543 PDCD10Q9BUL8 212 aa13.16□□□□□ -0.3
GFAP-205ENST00000585543 ZNF355PQ9NSJ1 428 aa13.16□□□□□ -0.3
GFAP-205ENST00000585543 ZFP57Q9NU63 452 aa13.16□□□□□ -0.3
GFAP-205ENST00000585543 FBXO7Q9Y3I1 522 aa13.16□□□□□ -0.3
GFAP-205ENST00000585543 NUDT19A8MXV4 375 aa13.15□□□□□ -0.3
GFAP-205ENST00000585543 PLA2G10O15496 165 aa13.15□□□□□ -0.3
GFAP-205ENST00000585543 CDS2O95674 445 aa13.15□□□□□ -0.3
GFAP-205ENST00000585543 CD83Q01151 205 aa13.15□□□□□ -0.3
GFAP-205ENST00000585543 CFHR3Q02985 330 aa13.15□□□□□ -0.3
GFAP-205ENST00000585543 ASAH1Q13510 395 aa13.15□□□□□ -0.3
GFAP-205ENST00000585543 NSUN5P1Q3KNT7 163 aa13.15□□□□□ -0.3
GFAP-205ENST00000585543 TMEM268Q5VZI3 342 aa13.15□□□□□ -0.3
GFAP-205ENST00000585543 C10orf99Q6UWK7 81 aa13.15□□□□□ -0.3
GFAP-205ENST00000585543 LGI3Q8N145 548 aa13.15□□□□□ -0.3
GFAP-205ENST00000585543 MINDY2Q8NBR6 621 aa13.15□□□□□ -0.3
GFAP-205ENST00000585543 OR1L8Q8NGR8 309 aa13.15□□□□□ -0.3
GFAP-205ENST00000585543 GLYATL2Q8WU03 294 aa13.15□□□□□ -0.3
GFAP-205ENST00000585543 IL22RA2Q969J5 263 aa13.15□□□□□ -0.3
GFAP-205ENST00000585543 H3BUA1 57 aa13.14□□□□□ -0.31
GFAP-205ENST00000585543 DHFRP00374 187 aa13.14□□□□□ -0.31
GFAP-205ENST00000585543 IGKV1-39P01597 117 aa13.14□□□□□ -0.31
GFAP-205ENST00000585543 IGKV1D-39P04432 117 aa13.14□□□□□ -0.31
GFAP-205ENST00000585543 EGR2P11161 476 aaPredicted RBP13.14□□□□□ -0.31
GFAP-205ENST00000585543 PPIFP30405 207 aaKnown RBP13.14□□□□□ -0.31
GFAP-205ENST00000585543 BTCP35070 178 aa13.14□□□□□ -0.31
GFAP-205ENST00000585543 MRGPRG-AS1Q2M3A8 158 aa13.14□□□□□ -0.31
GFAP-205ENST00000585543 C10orf55Q5SWW7 151 aa13.14□□□□□ -0.31
GFAP-205ENST00000585543 HSD17B13Q7Z5P4 300 aaPredicted RBP13.14□□□□□ -0.31
GFAP-205ENST00000585543 OR5B3Q8NH48 314 aa13.14□□□□□ -0.31
GFAP-205ENST00000585543 QTRT1Q9BXR0 403 aaKnown RBP13.14□□□□□ -0.31
GFAP-205ENST00000585543 C20orf85Q9H1P6 137 aa13.14□□□□□ -0.31
GFAP-205ENST00000585543 SLA2Q9H6Q3 261 aa13.14□□□□□ -0.31
GFAP-205ENST00000585543 COA4Q9NYJ1 87 aa13.14□□□□□ -0.31
GFAP-205ENST00000585543 OR51B2Q9Y5P1 312 aa13.14□□□□□ -0.31
GFAP-205ENST00000585543 STAB1Q9NY15 2570 aa13.14□□□□□ -0.31
GFAP-205ENST00000585543 TNCP24821 2201 aa13.13□□□□□ -0.31
GFAP-205ENST00000585543 TRAV3A0A0B4J244 114 aa13.13□□□□□ -0.31
GFAP-205ENST00000585543 A0A1W2PRX2 142 aa13.13□□□□□ -0.31
GFAP-205ENST00000585543 C15orf61A6NNL5 157 aa13.13□□□□□ -0.31
GFAP-205ENST00000585543 CYB5BO43169 146 aa13.13□□□□□ -0.31
GFAP-205ENST00000585543 TCRBP04435 133 aa13.13□□□□□ -0.31
GFAP-205ENST00000585543 OR9G9P0C7N8 305 aa13.13□□□□□ -0.31
GFAP-205ENST00000585543 SLC6A1P30531 599 aa13.13□□□□□ -0.31
GFAP-205ENST00000585543 MECP2P51608 486 aaKnown RBP13.13□□□□□ -0.31
GFAP-205ENST00000585543 OR2B8PP59922 312 aa13.13□□□□□ -0.31
GFAP-205ENST00000585543 SSBP2P81877 361 aaPredicted RBP13.13□□□□□ -0.31
GFAP-205ENST00000585543 TMEM187Q14656 261 aa13.13□□□□□ -0.31
GFAP-205ENST00000585543 C4orf46Q504U0 113 aa13.13□□□□□ -0.31
GFAP-205ENST00000585543 SELENOHQ8IZQ5 122 aaKnown RBP13.13□□□□□ -0.31
GFAP-205ENST00000585543 OR5T1Q8NG75 326 aa13.13□□□□□ -0.31
GFAP-205ENST00000585543 OR4F17Q8NGA8 305 aa13.13□□□□□ -0.31
GFAP-205ENST00000585543 FAM110DQ8TAY7 271 aaPredicted RBP13.13□□□□□ -0.31
GFAP-205ENST00000585543 TMEM56Q96MV1 263 aa13.13□□□□□ -0.31
GFAP-205ENST00000585543 OR4F4Q96R69 305 aa13.13□□□□□ -0.31
GFAP-205ENST00000585543 SRSF8Q9BRL6 282 aaKnown RBP13.13□□□□□ -0.31
GFAP-205ENST00000585543 HINT2Q9BX68 163 aa13.13□□□□□ -0.31
GFAP-205ENST00000585543 NSG2Q9Y328 171 aa13.13□□□□□ -0.31
GFAP-205ENST00000585543 TMEM56-RWDD3S4R434 201 aa13.13□□□□□ -0.31
GFAP-205ENST00000585543 DUXBA0A1W2PPF3 345 aa13.12□□□□□ -0.31
GFAP-205ENST00000585543 SFT2D2O95562 160 aa13.12□□□□□ -0.31
GFAP-205ENST00000585543 IGLV1-40P01703 118 aa13.12□□□□□ -0.31
GFAP-205ENST00000585543 HLA-AP01891 365 aaKnown RBP13.12□□□□□ -0.31
GFAP-205ENST00000585543 IL6RP08887 468 aaPredicted RBP13.12□□□□□ -0.31
GFAP-205ENST00000585543 TRAPPC2P0DI81 140 aa13.12□□□□□ -0.31
GFAP-205ENST00000585543 TRAPPC2BP0DI82 140 aa13.12□□□□□ -0.31
GFAP-205ENST00000585543 APELAP0DMC3 54 aa13.12□□□□□ -0.31
GFAP-205ENST00000585543 PSMB8P28062 276 aa13.12□□□□□ -0.31
GFAP-205ENST00000585543 TPPP2P59282 170 aa13.12□□□□□ -0.31
GFAP-205ENST00000585543 RPL23AP62750 156 aaKnown RBP13.12□□□□□ -0.31
GFAP-205ENST00000585543 PPP1R1AQ13522 171 aa13.12□□□□□ -0.31
GFAP-205ENST00000585543 C19orf54Q5BKX5 351 aa13.12□□□□□ -0.31
GFAP-205ENST00000585543 COQ8AQ8NI60 647 aa13.12□□□□□ -0.31
GFAP-205ENST00000585543 CASTOR1Q8WTX7 329 aa13.12□□□□□ -0.31
GFAP-205ENST00000585543 CACFD1Q9UGQ2 172 aa13.12□□□□□ -0.31
GFAP-205ENST00000585543 TBC1D24Q9ULP9 559 aa13.12□□□□□ -0.31
GFAP-205ENST00000585543 ZNF257Q9Y2Q1 563 aa13.12□□□□□ -0.31
GFAP-205ENST00000585543 A0A0B4J2A0 478 aa13.11□□□□□ -0.31
GFAP-205ENST00000585543 IGKV1-5P01602 117 aa13.11□□□□□ -0.31
GFAP-205ENST00000585543 TRGV3P03979 118 aa13.11□□□□□ -0.31
GFAP-205ENST00000585543 RPLP1P05386 114 aaKnown RBP13.11□□□□□ -0.31
GFAP-205ENST00000585543 RAB9AP51151 201 aa13.11□□□□□ -0.31
GFAP-205ENST00000585543 SUPT4H1P63272 117 aaKnown RBP13.11□□□□□ -0.31
GFAP-205ENST00000585543 SLC35G3Q8N808 338 aa13.11□□□□□ -0.31
GFAP-205ENST00000585543 RNF152Q8N8N0 203 aa13.11□□□□□ -0.31
GFAP-205ENST00000585543 KLHL30-AS1Q8NEE0 82 aa13.11□□□□□ -0.31
GFAP-205ENST00000585543 LSM10Q969L4 123 aaKnown RBP13.11□□□□□ -0.31
GFAP-205ENST00000585543 TMEM14BQ9NUH8 114 aa13.11□□□□□ -0.31
GFAP-205ENST00000585543 NUDT15Q9NV35 164 aa13.11□□□□□ -0.31
GFAP-205ENST00000585543 SHPKQ9UHJ6 478 aa13.11□□□□□ -0.31
GFAP-205ENST00000585543 FLVCR2Q9UPI3 526 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms