RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 RPL5P46777 297 aaKnown RBP11.29□□□□□ -0.6
VAPA-209ENST00000585042 CTF1Q16619 201 aa11.29□□□□□ -0.6
VAPA-209ENST00000585042 GUCA2BQ16661 112 aa11.29□□□□□ -0.6
VAPA-209ENST00000585042 TMEM69Q5SWH9 247 aa11.29□□□□□ -0.6
VAPA-209ENST00000585042 C10orf55Q5SWW7 151 aa11.29□□□□□ -0.6
VAPA-209ENST00000585042 OR4A47Q6IF82 309 aa11.29□□□□□ -0.6
VAPA-209ENST00000585042 MFSD4AQ8N468 514 aa11.29□□□□□ -0.6
VAPA-209ENST00000585042 OR4A5Q8NH83 315 aa11.29□□□□□ -0.6
VAPA-209ENST00000585042 FANCD2OSQ96PS1 177 aa11.29□□□□□ -0.6
VAPA-209ENST00000585042 FYTTD1Q96QD9 318 aaKnown RBP11.29□□□□□ -0.6
VAPA-209ENST00000585042 AUNIPQ9H7T9 357 aa11.29□□□□□ -0.6
VAPA-209ENST00000585042 SRD5A3Q9H8P0 318 aa11.29□□□□□ -0.6
VAPA-209ENST00000585042 COMMD3Q9UBI1 195 aa11.29□□□□□ -0.6
VAPA-209ENST00000585042 ELF5Q9UKW6 265 aaPredicted RBP11.29□□□□□ -0.6
VAPA-209ENST00000585042 STARD9Q9P2P6 4700 aa11.29□□□□□ -0.6
VAPA-209ENST00000585042 TRBV7-1A0A0A6YYK4 115 aa11.28□□□□□ -0.6
VAPA-209ENST00000585042 HMX3A6NHT5 357 aa11.28□□□□□ -0.6
VAPA-209ENST00000585042 A8MWP6 167 aa11.28□□□□□ -0.6
VAPA-209ENST00000585042 J3QRK9 145 aa11.28□□□□□ -0.6
VAPA-209ENST00000585042 APOA1P02647 267 aa11.28□□□□□ -0.6
VAPA-209ENST00000585042 ZNF182P17025 639 aaPredicted RBP11.28□□□□□ -0.6
VAPA-209ENST00000585042 CTRB1P17538 263 aa11.28□□□□□ -0.6
VAPA-209ENST00000585042 PSMB6P28072 239 aa11.28□□□□□ -0.6
VAPA-209ENST00000585042 ARL3P36405 182 aa11.28□□□□□ -0.6
VAPA-209ENST00000585042 ARPC4P59998 168 aa11.28□□□□□ -0.6
VAPA-209ENST00000585042 ZNF57Q68EA5 555 aaPredicted RBP11.28□□□□□ -0.6
VAPA-209ENST00000585042 CTRB2Q6GPI1 263 aa11.28□□□□□ -0.6
VAPA-209ENST00000585042 CLVS1Q8IUQ0 354 aaPredicted RBP11.28□□□□□ -0.6
VAPA-209ENST00000585042 VKORC1L1Q8N0U8 176 aa11.28□□□□□ -0.6
VAPA-209ENST00000585042 ZBTB34Q8NCN2 500 aa11.28□□□□□ -0.6
VAPA-209ENST00000585042 RAB2BQ8WUD1 216 aa11.28□□□□□ -0.6
VAPA-209ENST00000585042 TCTEX1D2Q8WW35 142 aa11.28□□□□□ -0.6
VAPA-209ENST00000585042 EEF1AKMT3Q96AZ1 226 aa11.28□□□□□ -0.6
VAPA-209ENST00000585042 CXorf58Q96LI9 332 aa11.28□□□□□ -0.6
VAPA-209ENST00000585042 BCL7BQ9BQE9 202 aa11.28□□□□□ -0.6
VAPA-209ENST00000585042 RETNQ9HD89 108 aa11.28□□□□□ -0.6
VAPA-209ENST00000585042 ANXA10Q9UJ72 324 aa11.28□□□□□ -0.6
VAPA-209ENST00000585042 DNAH1Q9P2D7 4330 aa11.28□□□□□ -0.6
VAPA-209ENST00000585042 TRAV25A0A0B4J276 109 aa11.27□□□□□ -0.61
VAPA-209ENST00000585042 IGKV1D-13A0A0B4J2D9 117 aa11.27□□□□□ -0.61
VAPA-209ENST00000585042 E7EUB6 86 aa11.27□□□□□ -0.61
VAPA-209ENST00000585042 NDUFB8O95169 186 aa11.27□□□□□ -0.61
VAPA-209ENST00000585042 FGF2P09038 288 aa11.27□□□□□ -0.61
VAPA-209ENST00000585042 IGKV1-13P0DP09 117 aa11.27□□□□□ -0.61
VAPA-209ENST00000585042 BRWD1-AS2P59051 145 aa11.27□□□□□ -0.61
VAPA-209ENST00000585042 RPL8P62917 257 aaKnown RBP11.27□□□□□ -0.61
VAPA-209ENST00000585042 BEST4Q8NFU0 473 aa11.27□□□□□ -0.61
VAPA-209ENST00000585042 MARC2Q969Z3 335 aa11.27□□□□□ -0.61
VAPA-209ENST00000585042 WDR89Q96FK6 387 aaPredicted RBP11.27□□□□□ -0.61
VAPA-209ENST00000585042 SRSF8Q9BRL6 282 aaKnown RBP11.27□□□□□ -0.61
VAPA-209ENST00000585042 NAA50Q9GZZ1 169 aaKnown RBP11.27□□□□□ -0.61
VAPA-209ENST00000585042 IFT46Q9NQC8 304 aa11.27□□□□□ -0.61
VAPA-209ENST00000585042 BET1LQ9NYM9 111 aa11.27□□□□□ -0.61
VAPA-209ENST00000585042 RBFOX2O43251 390 aaKnown RBP eCLIP11.26□□□□□ -0.61
VAPA-209ENST00000585042 SSX5O60225 188 aa11.26□□□□□ -0.61
VAPA-209ENST00000585042 HLA-AP01891 365 aaKnown RBP11.26□□□□□ -0.61
VAPA-209ENST00000585042 TMBIM6P55061 237 aa11.26□□□□□ -0.61
VAPA-209ENST00000585042 LINC01559Q495D7 138 aa11.26□□□□□ -0.61
VAPA-209ENST00000585042 OR2B11Q5JQS5 317 aa11.26□□□□□ -0.61
VAPA-209ENST00000585042 CLEC19AQ6UXS0 136 aa11.26□□□□□ -0.61
VAPA-209ENST00000585042 HOGA1Q86XE5 327 aa11.26□□□□□ -0.61
VAPA-209ENST00000585042 CCDC140Q96MF4 163 aa11.26□□□□□ -0.61
VAPA-209ENST00000585042 FAM110AQ9BQ89 295 aa11.26□□□□□ -0.61
VAPA-209ENST00000585042 PLA2G2EQ9NZK7 142 aa11.26□□□□□ -0.61
VAPA-209ENST00000585042 A0A1B0GW64 132 aa11.25□□□□□ -0.61
VAPA-209ENST00000585042 ZNF320A2RRD8 509 aa11.25□□□□□ -0.61
VAPA-209ENST00000585042 TMEM213A2RRL7 107 aa11.25□□□□□ -0.61
VAPA-209ENST00000585042 C8orf88P0DMB2 117 aa11.25□□□□□ -0.61
VAPA-209ENST00000585042 DEFA4P12838 97 aa11.25□□□□□ -0.61
VAPA-209ENST00000585042 HLA-GP17693 338 aa11.25□□□□□ -0.61
VAPA-209ENST00000585042 PRSS3P35030 304 aa11.25□□□□□ -0.61
VAPA-209ENST00000585042 ELLP55199 621 aaPredicted RBP11.25□□□□□ -0.61
VAPA-209ENST00000585042 TAS2R20P59543 309 aa11.25□□□□□ -0.61
VAPA-209ENST00000585042 TMEM61Q8N0U2 210 aa11.25□□□□□ -0.61
VAPA-209ENST00000585042 UXS1Q8NBZ7 420 aa11.25□□□□□ -0.61
VAPA-209ENST00000585042 OR52B4Q8NGK2 314 aa11.25□□□□□ -0.61
VAPA-209ENST00000585042 THYN1Q9P016 225 aa11.25□□□□□ -0.61
VAPA-209ENST00000585042 MRPL27Q9P0M9 148 aaKnown RBP11.25□□□□□ -0.61
VAPA-209ENST00000585042 IGLV11-55A0A075B6I3 123 aa11.24□□□□□ -0.61
VAPA-209ENST00000585042 LOC102724200A0A096LPH7 203 aaPredicted RBP11.24□□□□□ -0.61
VAPA-209ENST00000585042 FAM25AB3EWG3 89 aa11.24□□□□□ -0.61
VAPA-209ENST00000585042 FAM25CB3EWG5 89 aa11.24□□□□□ -0.61
VAPA-209ENST00000585042 FAM25GB3EWG6 89 aa11.24□□□□□ -0.61
VAPA-209ENST00000585042 CYB5BO43169 146 aa11.24□□□□□ -0.61
VAPA-209ENST00000585042 CLEC3BP05452 202 aa11.24□□□□□ -0.61
VAPA-209ENST00000585042 AREGP15514 252 aa11.24□□□□□ -0.61
VAPA-209ENST00000585042 TAS2R31P59538 309 aa11.24□□□□□ -0.61
VAPA-209ENST00000585042 POU2AF1Q16633 256 aa11.24□□□□□ -0.61
VAPA-209ENST00000585042 C15orf40Q8WUR7 153 aa11.24□□□□□ -0.61
VAPA-209ENST00000585042 GGTLC1Q9BX51 225 aa11.24□□□□□ -0.61
VAPA-209ENST00000585042 WFDC10AQ9H1F0 79 aa11.24□□□□□ -0.61
VAPA-209ENST00000585042 TAS2R8Q9NYW2 309 aa11.24□□□□□ -0.61
VAPA-209ENST00000585042 MLXQ9UH92 298 aa11.24□□□□□ -0.61
VAPA-209ENST00000585042 HPRT1P00492 218 aa11.23□□□□□ -0.61
VAPA-209ENST00000585042 EIF4EP06730 217 aaKnown RBP11.23□□□□□ -0.61
VAPA-209ENST00000585042 EDN2P20800 178 aa11.23□□□□□ -0.61
VAPA-209ENST00000585042 PTBP1P26599 531 aaKnown RBP eCLIP11.23□□□□□ -0.613e-7■■■□□ 15.2
VAPA-209ENST00000585042 THOC7Q6I9Y2 204 aaKnown RBP11.23□□□□□ -0.61
VAPA-209ENST00000585042 WFDC3Q8IUB2 231 aa11.23□□□□□ -0.61
VAPA-209ENST00000585042 GVQW1Q8N7I0 195 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms