RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 WFIKKN1Q96NZ8 548 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 TEAD3Q99594 435 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 OR51M1Q9H341 326 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 C16orf95Q9H693 158 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 FKBP14Q9NWM8 211 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 BABAM2Q9NXR7 383 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 OR52A1Q9UKL2 312 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 SPATA2Q9UM82 520 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 RCL1Q9Y2P8 373 aaKnown RBP1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 LINC00312Q9Y6C7 94 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 TLN1Q9Y490 2541 aaKnown RBP1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 ADGRG4Q8IZF6 3080 aa1.48□□□□□ -2.17
SMCHD1-211ENST00000584897 A0A1B0GTI1 187 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 TRDV1A0A1B0GX56 115 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 FAM231BA6NCW3 169 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 CD300LBA8K4G0 201 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 SRRM5B3KS81 715 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 SLC17A2O00624 439 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 FGF16O43320 207 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 ZG16O60844 167 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 PTTG1O95997 202 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 GCGP01275 180 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 AMBPP02760 352 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 FABP1P07148 127 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 OR4A8P0C604 315 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 ZNF32P17041 273 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 RCVRNP35243 200 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 BSPH1Q075Z2 132 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 SURF2Q15527 256 aaPredicted RBP1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 C1orf100Q5SVJ3 147 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 ZNF322Q6U7Q0 402 aaPredicted RBP1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 UNQ9370/PRO34162Q6UXP9 181 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 ZNF600Q6ZNG1 722 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 RNF175Q8N4F7 328 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 C22orf15Q8WYQ4 148 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 SMIM19Q96E16 107 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 MALSU1Q96EH3 234 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 RASL11BQ9BPW5 248 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 KLHDC3Q9BQ90 382 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 C19orf24Q9BVV8 132 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 REG4Q9BYZ8 158 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 SRRQ9GZT4 340 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 TMEM106BQ9NUM4 274 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 FKBP11Q9NYL4 201 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 TAAR3PQ9P1P4 343 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 JPT1Q9UK76 154 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 RAB22AQ9UL26 194 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 SSR3Q9UNL2 185 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 DNAH7Q8WXX0 4024 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 SPTAN1Q13813 2472 aaKnown RBP1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 TANC2Q9HCD6 1990 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 UNC13CQ8NB66 2214 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 SPTBN2O15020 2390 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 TRGV10A0A0A0MS01 117 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 SMIM31A0A1B0GVY4 71 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 TMEM30CPA0ZSE6 113 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 K7EQG2 157 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 ZNF593O00488 134 aaPredicted RBP1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 TCF21O43680 179 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 SSNA1O43805 119 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 DHFRP00374 187 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 MSMBP08118 114 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 HCKP08631 526 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 FBP1P09467 338 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 OR2B8PP59922 312 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 FGF12P61328 243 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 GNB1P62873 340 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 PSG4Q00888 419 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 MAD2L1BPQ15013 274 aaPredicted RBP1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 MESTQ5EB52 335 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 ANGPTL5Q86XS5 388 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 OR4S1Q8NGB4 309 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 OR51D1Q8NGF3 324 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 OR9I1Q8NGQ6 314 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 OR2G3Q8NGZ4 309 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 OR5AK2Q8NH90 309 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 TERB2Q8NHR7 220 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 OR5P3Q8WZ94 311 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 REEP6Q96HR9 211 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 ABHD14BQ96IU4 210 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 Q96M85 177 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 KIR2DL4Q99706 377 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 HDHD3Q9BSH5 251 aaPredicted RBP1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 ADAT1Q9BUB4 502 aaKnown RBP1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 METTL8Q9H825 291 aaKnown RBP1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 HES4Q9HCC6 221 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 CLEC5AQ9NY25 188 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 IGLV8-61A0A075B6I0 122 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 TMEM269A0A1B0GVZ9 245 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 DPRXA6NFQ7 191 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 SMKR1H3BMG3 65 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 GABRPO00591 440 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 SLC22A1O15245 554 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 RBFOX2O43251 390 aaKnown RBP eCLIP1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 UPK1BO75841 260 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 MMP23AO75900 390 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 CRYBA1P05813 215 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 GTF2F2P13984 249 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 PRTN3P24158 256 aa1.47□□□□□ -2.17
SMCHD1-211ENST00000584897 TGFBR2P37173 567 aa1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms