RNA–Protein interactions for RNA: ENST00000584717.1

CCDC57-219, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 513 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-219ENST00000584717 CCDC190Q86UF4 302 aa12.46□□□□□ -0.41
CCDC57-219ENST00000584717 MMD2Q8IY49 270 aa12.46□□□□□ -0.41
CCDC57-219ENST00000584717 C15orf40Q8WUR7 153 aa12.46□□□□□ -0.41
CCDC57-219ENST00000584717 WDR12Q9GZL7 423 aaKnown RBP12.46□□□□□ -0.41
CCDC57-219ENST00000584717 ATG5Q9H1Y0 275 aa12.46□□□□□ -0.41
CCDC57-219ENST00000584717 S4R3C0 116 aa12.46□□□□□ -0.41
CCDC57-219ENST00000584717 FRAS1Q86XX4 4008 aa12.46□□□□□ -0.42
CCDC57-219ENST00000584717 GGCTO75223 188 aaKnown RBP12.45□□□□□ -0.42
CCDC57-219ENST00000584717 ARFRP1Q13795 201 aa12.45□□□□□ -0.42
CCDC57-219ENST00000584717 ZNF846Q147U1 533 aa12.45□□□□□ -0.42
CCDC57-219ENST00000584717 KCTD9Q7L273 389 aa12.45□□□□□ -0.42
CCDC57-219ENST00000584717 VKORC1L1Q8N0U8 176 aa12.45□□□□□ -0.42
CCDC57-219ENST00000584717 TECRQ9NZ01 308 aaKnown RBP12.45□□□□□ -0.42
CCDC57-219ENST00000584717 EXTL2Q9UBQ6 330 aa12.45□□□□□ -0.42
CCDC57-219ENST00000584717 FBXL7Q9UJT9 491 aa12.45□□□□□ -0.42
CCDC57-219ENST00000584717 TEX22C9J3V5 150 aa12.44□□□□□ -0.42
CCDC57-219ENST00000584717 RAB27BO00194 218 aa12.44□□□□□ -0.42
CCDC57-219ENST00000584717 EIF4EP06730 217 aaKnown RBP12.44□□□□□ -0.42
CCDC57-219ENST00000584717 CNIH2Q6PI25 160 aa12.44□□□□□ -0.42
CCDC57-219ENST00000584717 SLC16A13Q7RTY0 426 aa12.44□□□□□ -0.42
CCDC57-219ENST00000584717 SLC25A42Q86VD7 318 aa12.44□□□□□ -0.42
CCDC57-219ENST00000584717 SLC25A38Q96DW6 304 aa12.44□□□□□ -0.42
CCDC57-219ENST00000584717 ELF5Q9UKW6 265 aaPredicted RBP12.44□□□□□ -0.42
CCDC57-219ENST00000584717 ZNF257Q9Y2Q1 563 aa12.44□□□□□ -0.42
CCDC57-219ENST00000584717 LGALS9O00182 355 aa12.43□□□□□ -0.42
CCDC57-219ENST00000584717 XRCC3O43542 346 aa12.43□□□□□ -0.42
CCDC57-219ENST00000584717 NDUFB8O95169 186 aa12.43□□□□□ -0.42
CCDC57-219ENST00000584717 CBLN1P23435 193 aa12.43□□□□□ -0.42
CCDC57-219ENST00000584717 ARL3P36405 182 aa12.43□□□□□ -0.42
CCDC57-219ENST00000584717 RPL30P62888 115 aaKnown RBP12.43□□□□□ -0.42
CCDC57-219ENST00000584717 ARL6IP1Q15041 203 aa12.43□□□□□ -0.42
CCDC57-219ENST00000584717 FAM209BQ5JX69 171 aa12.43□□□□□ -0.42
CCDC57-219ENST00000584717 CLEC19AQ6UXS0 136 aa12.43□□□□□ -0.42
CCDC57-219ENST00000584717 TMEM61Q8N0U2 210 aa12.43□□□□□ -0.42
CCDC57-219ENST00000584717 ZNF645Q8N7E2 425 aa12.43□□□□□ -0.42
CCDC57-219ENST00000584717 LINC00476Q8WZB0 136 aa12.43□□□□□ -0.42
CCDC57-219ENST00000584717 FYTTD1Q96QD9 318 aaKnown RBP12.43□□□□□ -0.42
CCDC57-219ENST00000584717 PRELID3BQ9Y3B1 194 aa12.43□□□□□ -0.42
CCDC57-219ENST00000584717 TMEM213A2RRL7 107 aa12.42□□□□□ -0.42
CCDC57-219ENST00000584717 E7EUB6 86 aa12.42□□□□□ -0.42
CCDC57-219ENST00000584717 SCAF4O95104 1147 aaKnown RBP12.42□□□□□ -0.42
CCDC57-219ENST00000584717 IL6RP08887 468 aaPredicted RBP12.42□□□□□ -0.42
CCDC57-219ENST00000584717 NFYAP23511 347 aaPredicted RBP12.42□□□□□ -0.42
CCDC57-219ENST00000584717 RPL27AP46776 148 aaKnown RBP12.42□□□□□ -0.42
CCDC57-219ENST00000584717 PPP5CP53041 499 aa12.42□□□□□ -0.42
CCDC57-219ENST00000584717 PMS2P11Q13670 270 aa12.42□□□□□ -0.42
CCDC57-219ENST00000584717 IL18Q14116 193 aa12.42□□□□□ -0.42
CCDC57-219ENST00000584717 TMEM69Q5SWH9 247 aa12.42□□□□□ -0.42
CCDC57-219ENST00000584717 ZNF57Q68EA5 555 aaPredicted RBP12.42□□□□□ -0.42
CCDC57-219ENST00000584717 Q6ZS49 121 aa12.42□□□□□ -0.42
CCDC57-219ENST00000584717 OR52B4Q8NGK2 314 aa12.42□□□□□ -0.42
CCDC57-219ENST00000584717 CCDC140Q96MF4 163 aa12.42□□□□□ -0.42
CCDC57-219ENST00000584717 SOSTQ9BQB4 213 aa12.42□□□□□ -0.42
CCDC57-219ENST00000584717 OVOL2Q9BRP0 275 aa12.42□□□□□ -0.42
CCDC57-219ENST00000584717 GGTLC1Q9BX51 225 aa12.42□□□□□ -0.42
CCDC57-219ENST00000584717 MLXQ9UH92 298 aa12.42□□□□□ -0.42
CCDC57-219ENST00000584717 MRPS7Q9Y2R9 242 aaKnown RBP12.42□□□□□ -0.42
CCDC57-219ENST00000584717 RBMX2Q9Y388 322 aaKnown RBP12.42□□□□□ -0.42
CCDC57-219ENST00000584717 A0A1B0GW64 132 aa12.41□□□□□ -0.42
CCDC57-219ENST00000584717 ZNF320A2RRD8 509 aa12.41□□□□□ -0.42
CCDC57-219ENST00000584717 NPIPB5A8MRT5 1133 aa12.41□□□□□ -0.42
CCDC57-219ENST00000584717 KBTBD11O94819 623 aa12.41□□□□□ -0.42
CCDC57-219ENST00000584717 LY6G6CO95867 125 aa12.41□□□□□ -0.42
CCDC57-219ENST00000584717 AREGP15514 252 aa12.41□□□□□ -0.42
CCDC57-219ENST00000584717 GPHB5Q86YW7 130 aa12.41□□□□□ -0.42
CCDC57-219ENST00000584717 MFSD4AQ8N468 514 aa12.41□□□□□ -0.42
CCDC57-219ENST00000584717 GDPD1Q8N9F7 314 aa12.41□□□□□ -0.42
CCDC57-219ENST00000584717 FANCD2OSQ96PS1 177 aa12.41□□□□□ -0.42
CCDC57-219ENST00000584717 ST6GALNAC5Q9BVH7 336 aa12.41□□□□□ -0.42
CCDC57-219ENST00000584717 OR2W1Q9Y3N9 320 aa12.41□□□□□ -0.42
CCDC57-219ENST00000584717 TRAV18A0A075B6X5 111 aa12.4□□□□□ -0.42
CCDC57-219ENST00000584717 LOC102724200A0A096LPH7 203 aaPredicted RBP12.4□□□□□ -0.42
CCDC57-219ENST00000584717 IGKV1D-13A0A0B4J2D9 117 aa12.4□□□□□ -0.42
CCDC57-219ENST00000584717 CXorf65A6NEN9 183 aa12.4□□□□□ -0.42
CCDC57-219ENST00000584717 IGLV2-14P01704 120 aa12.4□□□□□ -0.42
CCDC57-219ENST00000584717 IGKV1-13P0DP09 117 aa12.4□□□□□ -0.42
CCDC57-219ENST00000584717 DTYMKP23919 212 aa12.4□□□□□ -0.42
CCDC57-219ENST00000584717 MRPS10P82664 201 aaKnown RBP12.4□□□□□ -0.42
CCDC57-219ENST00000584717 PYDC2Q56P42 97 aa12.4□□□□□ -0.42
CCDC57-219ENST00000584717 BTNL8Q6UX41 500 aa12.4□□□□□ -0.42
CCDC57-219ENST00000584717 UXS1Q8NBZ7 420 aa12.4□□□□□ -0.42
CCDC57-219ENST00000584717 OR4S2Q8NH73 311 aa12.4□□□□□ -0.42
CCDC57-219ENST00000584717 TMEM167AQ8TBQ9 72 aa12.4□□□□□ -0.42
CCDC57-219ENST00000584717 TCTEX1D2Q8WW35 142 aa12.4□□□□□ -0.42
CCDC57-219ENST00000584717 OR2A7Q96R45 310 aa12.4□□□□□ -0.42
CCDC57-219ENST00000584717 SLC2A9Q9NRM0 540 aa12.4□□□□□ -0.42
CCDC57-219ENST00000584717 A8MWP6 167 aa12.39□□□□□ -0.43
CCDC57-219ENST00000584717 CTDSPLO15194 276 aa12.39□□□□□ -0.43
CCDC57-219ENST00000584717 HLA-DQB1P01920 261 aa12.39□□□□□ -0.43
CCDC57-219ENST00000584717 REG1AP05451 166 aa12.39□□□□□ -0.43
CCDC57-219ENST00000584717 MYOD1P15172 320 aa12.39□□□□□ -0.43
CCDC57-219ENST00000584717 FAM106AQ4KMX7 169 aa12.39□□□□□ -0.43
CCDC57-219ENST00000584717 SSX9Q7RTT3 188 aa12.39□□□□□ -0.43
CCDC57-219ENST00000584717 PUSL1Q8N0Z8 303 aaKnown RBP12.39□□□□□ -0.43
CCDC57-219ENST00000584717 VSTM2AQ8TAG5 236 aa12.39□□□□□ -0.43
CCDC57-219ENST00000584717 EEF1AKMT3Q96AZ1 226 aa12.39□□□□□ -0.43
CCDC57-219ENST00000584717 GPHA2Q96T91 129 aa12.39□□□□□ -0.43
CCDC57-219ENST00000584717 V9GYH0 126 aa12.39□□□□□ -0.43
CCDC57-219ENST00000584717 KMT2AQ03164 3969 aa12.38□□□□□ -0.43
CCDC57-219ENST00000584717 MFSD2BA6NFX1 497 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms