RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 IFT46Q9NQC8 304 aa8.45□□□□□ -1.06
CCDC47-206ENST00000584112 CCL28Q9NRJ3 127 aa8.45□□□□□ -1.06
CCDC47-206ENST00000584112 SLC2A9Q9NRM0 540 aa8.45□□□□□ -1.06
CCDC47-206ENST00000584112 BET1LQ9NYM9 111 aa8.45□□□□□ -1.06
CCDC47-206ENST00000584112 A0A087WXM4 84 aa8.44□□□□□ -1.06
CCDC47-206ENST00000584112 HMX3A6NHT5 357 aa8.44□□□□□ -1.06
CCDC47-206ENST00000584112 ZNF735P0CB33 412 aa8.44□□□□□ -1.06
CCDC47-206ENST00000584112 PTHLHP12272 177 aa8.44□□□□□ -1.06
CCDC47-206ENST00000584112 HIST1H1BP16401 226 aaKnown RBP8.44□□□□□ -1.06
CCDC47-206ENST00000584112 BRWD1-AS2P59051 145 aa8.44□□□□□ -1.06
CCDC47-206ENST00000584112 TAS2R31P59538 309 aa8.44□□□□□ -1.06
CCDC47-206ENST00000584112 FXYD4P59646 89 aa8.44□□□□□ -1.06
CCDC47-206ENST00000584112 HERV-K104P61576 105 aa8.44□□□□□ -1.06
CCDC47-206ENST00000584112 CD300LFQ8TDQ1 290 aa8.44□□□□□ -1.06
CCDC47-206ENST00000584112 GIMAP1Q8WWP7 306 aa8.44□□□□□ -1.06
CCDC47-206ENST00000584112 GPHA2Q96T91 129 aa8.44□□□□□ -1.06
CCDC47-206ENST00000584112 HRASLSQ9HDD0 168 aa8.44□□□□□ -1.06
CCDC47-206ENST00000584112 FBXL7Q9UJT9 491 aa8.44□□□□□ -1.06
CCDC47-206ENST00000584112 ADAM30Q9UKF2 790 aa8.44□□□□□ -1.06
CCDC47-206ENST00000584112 DNAH17Q9UFH2 4485 aa8.44□□□□□ -1.06
CCDC47-206ENST00000584112 SULT1C2O00338 296 aa8.43□□□□□ -1.06
CCDC47-206ENST00000584112 GGCTO75223 188 aaKnown RBP8.43□□□□□ -1.06
CCDC47-206ENST00000584112 TNFAIP8O95379 198 aa8.43□□□□□ -1.06
CCDC47-206ENST00000584112 HPRT1P00492 218 aa8.43□□□□□ -1.06
CCDC47-206ENST00000584112 CRYGCP07315 174 aa8.43□□□□□ -1.06
CCDC47-206ENST00000584112 IL6RP08887 468 aaPredicted RBP8.43□□□□□ -1.06
CCDC47-206ENST00000584112 NQO2P16083 231 aa8.43□□□□□ -1.06
CCDC47-206ENST00000584112 HLA-GP17693 338 aa8.43□□□□□ -1.06
CCDC47-206ENST00000584112 PSMB6P28072 239 aa8.43□□□□□ -1.06
CCDC47-206ENST00000584112 TMEM69Q5SWH9 247 aa8.43□□□□□ -1.06
CCDC47-206ENST00000584112 OR4A47Q6IF82 309 aa8.43□□□□□ -1.06
CCDC47-206ENST00000584112 TMEM17Q86X19 198 aa8.43□□□□□ -1.06
CCDC47-206ENST00000584112 LAX1Q8IWV1 398 aa8.43□□□□□ -1.06
CCDC47-206ENST00000584112 DYNLRB2Q8TF09 96 aa8.43□□□□□ -1.06
CCDC47-206ENST00000584112 C19orf73Q9NVV2 129 aa8.43□□□□□ -1.06
CCDC47-206ENST00000584112 EHFQ9NZC4 300 aa8.43□□□□□ -1.06
CCDC47-206ENST00000584112 DNAH6Q9C0G6 4158 aa8.42□□□□□ -1.06
CCDC47-206ENST00000584112 A0A1B0GVY2 172 aa8.42□□□□□ -1.06
CCDC47-206ENST00000584112 MEIS3P1A6NDR6 274 aa8.42□□□□□ -1.06
CCDC47-206ENST00000584112 E7EUB6 86 aa8.42□□□□□ -1.06
CCDC47-206ENST00000584112 FCER2P06734 321 aa8.42□□□□□ -1.06
CCDC47-206ENST00000584112 FGF2P09038 288 aa8.42□□□□□ -1.06
CCDC47-206ENST00000584112 DEFA4P12838 97 aa8.42□□□□□ -1.06
CCDC47-206ENST00000584112 CTRB1P17538 263 aa8.42□□□□□ -1.06
CCDC47-206ENST00000584112 RPS19P39019 145 aaKnown RBP8.42□□□□□ -1.06
CCDC47-206ENST00000584112 TAS2R46P59540 309 aa8.42□□□□□ -1.06
CCDC47-206ENST00000584112 POU2AF1Q16633 256 aa8.42□□□□□ -1.06
CCDC47-206ENST00000584112 AADACL3Q5VUY0 350 aa8.42□□□□□ -1.06
CCDC47-206ENST00000584112 CTRB2Q6GPI1 263 aa8.42□□□□□ -1.06
CCDC47-206ENST00000584112 THOC7Q6I9Y2 204 aaKnown RBP8.42□□□□□ -1.06
CCDC47-206ENST00000584112 ZNF818PQ6ZRF7 136 aa8.42□□□□□ -1.06
CCDC47-206ENST00000584112 SAMD12Q8N8I0 201 aa8.42□□□□□ -1.06
CCDC47-206ENST00000584112 TSPAN14Q8NG11 270 aa8.42□□□□□ -1.06
CCDC47-206ENST00000584112 EEF1AKMT3Q96AZ1 226 aa8.42□□□□□ -1.06
CCDC47-206ENST00000584112 YIPF6Q96EC8 236 aa8.42□□□□□ -1.06
CCDC47-206ENST00000584112 SRSF8Q9BRL6 282 aaKnown RBP8.42□□□□□ -1.06
CCDC47-206ENST00000584112 THAP7Q9BT49 309 aaPredicted RBP8.42□□□□□ -1.06
CCDC47-206ENST00000584112 COMMD5Q9GZQ3 224 aa8.42□□□□□ -1.06
CCDC47-206ENST00000584112 TUBA4BQ9H853 241 aa8.42□□□□□ -1.06
CCDC47-206ENST00000584112 PLEKHA2Q9HB19 425 aa8.42□□□□□ -1.06
CCDC47-206ENST00000584112 COMMD9Q9P000 198 aa8.42□□□□□ -1.06
CCDC47-206ENST00000584112 PKD1P98161 4303 aa8.41□□□□□ -1.06
CCDC47-206ENST00000584112 A0A1B0GW64 132 aa8.41□□□□□ -1.06
CCDC47-206ENST00000584112 PPP5D1E7EU14 171 aa8.41□□□□□ -1.06
CCDC47-206ENST00000584112 LGALS9O00182 355 aa8.41□□□□□ -1.06
CCDC47-206ENST00000584112 CYB5BO43169 146 aa8.41□□□□□ -1.06
CCDC47-206ENST00000584112 AREGP15514 252 aa8.41□□□□□ -1.06
CCDC47-206ENST00000584112 ARL3P36405 182 aa8.41□□□□□ -1.06
CCDC47-206ENST00000584112 TGFBR1P36897 503 aa8.41□□□□□ -1.06
CCDC47-206ENST00000584112 MECP2P51608 486 aaKnown RBP8.41□□□□□ -1.06
CCDC47-206ENST00000584112 TAS2R20P59543 309 aa8.41□□□□□ -1.06
CCDC47-206ENST00000584112 LSM3P62310 102 aaKnown RBP8.41□□□□□ -1.06
CCDC47-206ENST00000584112 KLK9Q2XQG4 91 aa8.41□□□□□ -1.06
CCDC47-206ENST00000584112 DHRS11Q6UWP2 260 aa8.41□□□□□ -1.06
CCDC47-206ENST00000584112 CMTM1Q8IZ96 169 aa8.41□□□□□ -1.06
CCDC47-206ENST00000584112 DMBX1Q8NFW5 382 aa8.41□□□□□ -1.06
CCDC47-206ENST00000584112 OR5H2Q8NGV7 314 aa8.41□□□□□ -1.06
CCDC47-206ENST00000584112 OR51H1Q8NH63 302 aa8.41□□□□□ -1.06
CCDC47-206ENST00000584112 CXorf58Q96LI9 332 aa8.41□□□□□ -1.06
CCDC47-206ENST00000584112 FANCD2OSQ96PS1 177 aa8.41□□□□□ -1.06
CCDC47-206ENST00000584112 SPATA25Q9BR10 227 aa8.41□□□□□ -1.06
CCDC47-206ENST00000584112 TECRQ9NZ01 308 aaKnown RBP8.41□□□□□ -1.06
CCDC47-206ENST00000584112 THYN1Q9P016 225 aa8.41□□□□□ -1.06
CCDC47-206ENST00000584112 KLK9Q9UKQ9 250 aa8.41□□□□□ -1.06
CCDC47-206ENST00000584112 ANAPC10Q9UM13 185 aa8.41□□□□□ -1.06
CCDC47-206ENST00000584112 TRBV7-1A0A0A6YYK4 115 aa8.4□□□□□ -1.06
CCDC47-206ENST00000584112 IZUMO1RA6ND01 250 aa8.4□□□□□ -1.06
CCDC47-206ENST00000584112 C2orf70A6NJV1 201 aa8.4□□□□□ -1.06
CCDC47-206ENST00000584112 UPK2O00526 184 aa8.4□□□□□ -1.06
CCDC47-206ENST00000584112 S1PR2O95136 353 aa8.4□□□□□ -1.06
CCDC47-206ENST00000584112 NDUFB8O95169 186 aa8.4□□□□□ -1.06
CCDC47-206ENST00000584112 NAT1P18440 290 aa8.4□□□□□ -1.06
CCDC47-206ENST00000584112 GNRHRP30968 328 aa8.4□□□□□ -1.06
CCDC47-206ENST00000584112 PRSS3P35030 304 aa8.4□□□□□ -1.06
CCDC47-206ENST00000584112 RFX2P48378 723 aa8.4□□□□□ -1.06
CCDC47-206ENST00000584112 OR2B8PP59922 312 aa8.4□□□□□ -1.06
CCDC47-206ENST00000584112 ERVK-16P61578 105 aa8.4□□□□□ -1.06
CCDC47-206ENST00000584112 CD300EQ496F6 205 aaPredicted RBP8.4□□□□□ -1.06
CCDC47-206ENST00000584112 FAM106AQ4KMX7 169 aa8.4□□□□□ -1.06
CCDC47-206ENST00000584112 CLEC19AQ6UXS0 136 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms