RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-231ENST00000584063 IGHV2-70DA0A0C4DH43 119 aa9.71□□□□□ -0.85
CDK5RAP3-231ENST00000584063 TMEM89A2RUT3 159 aa9.71□□□□□ -0.85
CDK5RAP3-231ENST00000584063 WDR1O75083 606 aa9.71□□□□□ -0.85
CDK5RAP3-231ENST00000584063 MMP23AO75900 390 aa9.71□□□□□ -0.85
CDK5RAP3-231ENST00000584063 KITLGP21583 273 aa9.71□□□□□ -0.85
CDK5RAP3-231ENST00000584063 COL8A2P25067 703 aa9.71□□□□□ -0.85
CDK5RAP3-231ENST00000584063 OR8B8Q15620 311 aa9.71□□□□□ -0.85
CDK5RAP3-231ENST00000584063 LTC4SQ16873 150 aa9.71□□□□□ -0.85
CDK5RAP3-231ENST00000584063 FBLN7Q53RD9 439 aa9.71□□□□□ -0.85
CDK5RAP3-231ENST00000584063 ZNF705AQ6ZN79 300 aaPredicted RBP9.71□□□□□ -0.85
CDK5RAP3-231ENST00000584063 ZDHHC23Q8IYP9 409 aa9.71□□□□□ -0.85
CDK5RAP3-231ENST00000584063 FGFRL1Q8N441 504 aa9.71□□□□□ -0.85
CDK5RAP3-231ENST00000584063 LRTM2Q8N967 370 aa9.71□□□□□ -0.85
CDK5RAP3-231ENST00000584063 OR4A16Q8NH70 328 aa9.71□□□□□ -0.85
CDK5RAP3-231ENST00000584063 PLPPR2Q96GM1 343 aa9.71□□□□□ -0.85
CDK5RAP3-231ENST00000584063 CACNG5Q9UF02 275 aa9.71□□□□□ -0.85
CDK5RAP3-231ENST00000584063 CADP27708 2225 aa9.71□□□□□ -0.86
CDK5RAP3-231ENST00000584063 ANKRD30BLA7E2S9 258 aa9.71□□□□□ -0.86
CDK5RAP3-231ENST00000584063 CEBPZOSA8MTT3 80 aa9.71□□□□□ -0.86
CDK5RAP3-231ENST00000584063 RPL36A-HNRNPH2H7BZ11 118 aa9.71□□□□□ -0.86
CDK5RAP3-231ENST00000584063 PGLYRP1O75594 196 aaPredicted RBP9.71□□□□□ -0.86
CDK5RAP3-231ENST00000584063 TRGC1P0CF51 173 aa9.71□□□□□ -0.86
CDK5RAP3-231ENST00000584063 LINC00205P59089 165 aa9.71□□□□□ -0.86
CDK5RAP3-231ENST00000584063 PLP1P60201 277 aa9.71□□□□□ -0.86
CDK5RAP3-231ENST00000584063 TCTEX1D4Q5JR98 221 aa9.71□□□□□ -0.86
CDK5RAP3-231ENST00000584063 SPANXN5Q5MJ07 72 aa9.71□□□□□ -0.86
CDK5RAP3-231ENST00000584063 CLDND2Q8NHS1 167 aa9.71□□□□□ -0.86
CDK5RAP3-231ENST00000584063 ABHD5Q8WTS1 349 aa9.71□□□□□ -0.86
CDK5RAP3-231ENST00000584063 OR2J1Q9GZK6 312 aa9.71□□□□□ -0.86
CDK5RAP3-231ENST00000584063 TUBA4BQ9H853 241 aa9.71□□□□□ -0.86
CDK5RAP3-231ENST00000584063 PITX3O75364 302 aa9.7□□□□□ -0.86
CDK5RAP3-231ENST00000584063 WNT2P09544 360 aa9.7□□□□□ -0.86
CDK5RAP3-231ENST00000584063 RTP5Q14D33 572 aa9.7□□□□□ -0.86
CDK5RAP3-231ENST00000584063 KHDC3LQ587J8 217 aa9.7□□□□□ -0.86
CDK5RAP3-231ENST00000584063 GATAD1Q8WUU5 269 aa9.7□□□□□ -0.86
CDK5RAP3-231ENST00000584063 YPEL4Q96NS1 127 aa9.7□□□□□ -0.86
CDK5RAP3-231ENST00000584063 GTSF1LQ9H1H1 148 aa9.7□□□□□ -0.86
CDK5RAP3-231ENST00000584063 SPRR3Q9UBC9 169 aa9.7□□□□□ -0.86
CDK5RAP3-231ENST00000584063 RNF115Q9Y4L5 304 aa9.7□□□□□ -0.86
CDK5RAP3-231ENST00000584063 SIRPB1O00241 398 aa9.7□□□□□ -0.86
CDK5RAP3-231ENST00000584063 TNFRSF13BO14836 293 aaPredicted RBP9.7□□□□□ -0.86
CDK5RAP3-231ENST00000584063 LMO1P25800 156 aa9.7□□□□□ -0.86
CDK5RAP3-231ENST00000584063 CCKARP32238 428 aa9.7□□□□□ -0.86
CDK5RAP3-231ENST00000584063 PAX2Q02962 417 aa9.7□□□□□ -0.86
CDK5RAP3-231ENST00000584063 ZNF585BQ52M93 769 aa9.7□□□□□ -0.86
CDK5RAP3-231ENST00000584063 CNEP1R1Q8N9A8 125 aa9.7□□□□□ -0.86
CDK5RAP3-231ENST00000584063 OR52E5Q8NH55 327 aa9.7□□□□□ -0.86
CDK5RAP3-231ENST00000584063 C10orf35Q96D05 121 aa9.7□□□□□ -0.86
CDK5RAP3-231ENST00000584063 TVP23CQ96ET8 276 aa9.7□□□□□ -0.86
CDK5RAP3-231ENST00000584063 C11orf1Q9H5F2 150 aa9.7□□□□□ -0.86
CDK5RAP3-231ENST00000584063 TOX4O94842 621 aa9.69□□□□□ -0.86
CDK5RAP3-231ENST00000584063 TOMM40O96008 361 aa9.69□□□□□ -0.86
CDK5RAP3-231ENST00000584063 NKX6-1P78426 367 aaPredicted RBP9.69□□□□□ -0.86
CDK5RAP3-231ENST00000584063 ZNF726P1Q15940 193 aa9.69□□□□□ -0.86
CDK5RAP3-231ENST00000584063 PRSS8Q16651 343 aa9.69□□□□□ -0.86
CDK5RAP3-231ENST00000584063 NMSQ5H8A3 153 aa9.69□□□□□ -0.86
CDK5RAP3-231ENST00000584063 WDR82Q6UXN9 313 aa9.69□□□□□ -0.86
CDK5RAP3-231ENST00000584063 LRP11Q86VZ4 500 aa9.69□□□□□ -0.86
CDK5RAP3-231ENST00000584063 ZNF295-AS1Q8N0V1 137 aa9.69□□□□□ -0.86
CDK5RAP3-231ENST00000584063 APH1AQ96BI3 265 aa9.69□□□□□ -0.86
CDK5RAP3-231ENST00000584063 C1QTNF5Q9BXJ0 243 aa9.69□□□□□ -0.86
CDK5RAP3-231ENST00000584063 SLC25A31Q9H0C2 315 aa9.69□□□□□ -0.86
CDK5RAP3-231ENST00000584063 KIAA1456Q9P272 454 aa9.69□□□□□ -0.86
CDK5RAP3-231ENST00000584063 TNRC6AQ8NDV7 1962 aaKnown RBP9.69□□□□□ -0.86
CDK5RAP3-231ENST00000584063 VDAC1P21796 283 aa9.69□□□□□ -0.86
CDK5RAP3-231ENST00000584063 CA6P23280 308 aa9.69□□□□□ -0.86
CDK5RAP3-231ENST00000584063 TCL1AP56279 114 aa9.69□□□□□ -0.86
CDK5RAP3-231ENST00000584063 LFNGQ8NES3 379 aa9.69□□□□□ -0.86
CDK5RAP3-231ENST00000584063 SNIP1Q8TAD8 396 aaKnown RBP9.69□□□□□ -0.86
CDK5RAP3-231ENST00000584063 MRAP2Q96G30 205 aa9.69□□□□□ -0.86
CDK5RAP3-231ENST00000584063 LAMP3Q9UQV4 416 aa9.69□□□□□ -0.86
CDK5RAP3-231ENST00000584063 BSNQ9UPA5 3926 aa9.69□□□□□ -0.86
CDK5RAP3-231ENST00000584063 CELA3BP08861 270 aa9.69□□□□□ -0.86
CDK5RAP3-231ENST00000584063 HLA-DRB3P79483 266 aa9.69□□□□□ -0.86
CDK5RAP3-231ENST00000584063 ID3Q02535 119 aa9.69□□□□□ -0.86
CDK5RAP3-231ENST00000584063 ADIRFQ15847 76 aa9.69□□□□□ -0.86
CDK5RAP3-231ENST00000584063 CXorf67Q86X51 503 aaPredicted RBP9.69□□□□□ -0.86
CDK5RAP3-231ENST00000584063 SLC35E1Q96K37 410 aa9.69□□□□□ -0.86
CDK5RAP3-231ENST00000584063 ZGRF1Q86YA3 2104 aa9.68□□□□□ -0.86
CDK5RAP3-231ENST00000584063 POLEQ07864 2286 aa9.68□□□□□ -0.86
CDK5RAP3-231ENST00000584063 UBE2L5PA0A1B0GUS4 154 aa9.68□□□□□ -0.86
CDK5RAP3-231ENST00000584063 UCP3P55916 312 aa9.68□□□□□ -0.86
CDK5RAP3-231ENST00000584063 KHDC1LQ5JSQ8 128 aa9.68□□□□□ -0.86
CDK5RAP3-231ENST00000584063 OR5B12Q96R08 314 aa9.68□□□□□ -0.86
CDK5RAP3-231ENST00000584063 ATP5SQ99766 215 aa9.68□□□□□ -0.86
CDK5RAP3-231ENST00000584063 INTS1Q8N201 2190 aaKnown RBP9.68□□□□□ -0.86
CDK5RAP3-231ENST00000584063 TMEM213A2RRL7 107 aa9.68□□□□□ -0.86
CDK5RAP3-231ENST00000584063 FAM90A18PA6NE21 464 aa9.68□□□□□ -0.86
CDK5RAP3-231ENST00000584063 FAM90A16PA6NEW6 464 aa9.68□□□□□ -0.86
CDK5RAP3-231ENST00000584063 FAM90A9PA6NNJ1 464 aa9.68□□□□□ -0.86
CDK5RAP3-231ENST00000584063 ZNF705GA8MUZ8 300 aaPredicted RBP9.68□□□□□ -0.86
CDK5RAP3-231ENST00000584063 FAM90A5PA8MXJ8 464 aa9.68□□□□□ -0.86
CDK5RAP3-231ENST00000584063 K7EM74 188 aa9.68□□□□□ -0.86
CDK5RAP3-231ENST00000584063 IGKV1-39P01597 117 aa9.68□□□□□ -0.86
CDK5RAP3-231ENST00000584063 IGKV1D-39P04432 117 aa9.68□□□□□ -0.86
CDK5RAP3-231ENST00000584063 FAM90A15PP0C7V4 464 aa9.68□□□□□ -0.86
CDK5RAP3-231ENST00000584063 FAM90A14PP0C7W9 464 aa9.68□□□□□ -0.86
CDK5RAP3-231ENST00000584063 CAMPP49913 170 aa9.68□□□□□ -0.86
CDK5RAP3-231ENST00000584063 TIMM23BQ5SRD1 257 aa9.68□□□□□ -0.86
CDK5RAP3-231ENST00000584063 DOLPP1Q86YN1 238 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms