RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 GSTZ1O43708 216 aaPredicted RBP9.23□□□□□ -0.93
TOP3A-215ENST00000583328 TUSC2O75896 110 aa9.23□□□□□ -0.93
TOP3A-215ENST00000583328 APELAP0DMC3 54 aa9.23□□□□□ -0.93
TOP3A-215ENST00000583328 SSBP2P81877 361 aaPredicted RBP9.23□□□□□ -0.93
TOP3A-215ENST00000583328 LINC00299Q6ZSB3 139 aa9.23□□□□□ -0.93
TOP3A-215ENST00000583328 LYSMD2Q8IV50 215 aa9.23□□□□□ -0.93
TOP3A-215ENST00000583328 GATAD1Q8WUU5 269 aa9.23□□□□□ -0.93
TOP3A-215ENST00000583328 SLC35D1Q9NTN3 355 aa9.23□□□□□ -0.93
TOP3A-215ENST00000583328 TECRQ9NZ01 308 aaKnown RBP9.23□□□□□ -0.93
TOP3A-215ENST00000583328 EHFQ9NZC4 300 aa9.23□□□□□ -0.93
TOP3A-215ENST00000583328 PTTG2Q9NZH5 202 aa9.23□□□□□ -0.93
TOP3A-215ENST00000583328 KLK11Q9UBX7 282 aa9.23□□□□□ -0.93
TOP3A-215ENST00000583328 ZNF221Q9UK13 617 aa9.23□□□□□ -0.93
TOP3A-215ENST00000583328 RBMX2Q9Y388 322 aaKnown RBP9.23□□□□□ -0.93
TOP3A-215ENST00000583328 OR2W1Q9Y3N9 320 aa9.23□□□□□ -0.93
TOP3A-215ENST00000583328 MSGN1A6NI15 193 aa9.22□□□□□ -0.93
TOP3A-215ENST00000583328 C2orf70A6NJV1 201 aa9.22□□□□□ -0.93
TOP3A-215ENST00000583328 PROP1O75360 226 aa9.22□□□□□ -0.93
TOP3A-215ENST00000583328 RBMXL2O75526 392 aaKnown RBP9.22□□□□□ -0.93
TOP3A-215ENST00000583328 NDUFB8O95169 186 aa9.22□□□□□ -0.93
TOP3A-215ENST00000583328 PMP2P02689 132 aa9.22□□□□□ -0.93
TOP3A-215ENST00000583328 FOLR2P14207 255 aa9.22□□□□□ -0.93
TOP3A-215ENST00000583328 TBPP20226 339 aa9.22□□□□□ -0.93
TOP3A-215ENST00000583328 NFYAP23511 347 aaPredicted RBP9.22□□□□□ -0.93
TOP3A-215ENST00000583328 HLA-DMAP28067 261 aa9.22□□□□□ -0.93
TOP3A-215ENST00000583328 FCGR2CP31995 323 aa9.22□□□□□ -0.93
TOP3A-215ENST00000583328 HRH1P35367 487 aa9.22□□□□□ -0.93
TOP3A-215ENST00000583328 EWSR1Q01844 656 aaKnown RBP eCLIP9.22□□□□□ -0.93
TOP3A-215ENST00000583328 ATP5G2Q06055 141 aa9.22□□□□□ -0.93
TOP3A-215ENST00000583328 ZNF79Q15937 498 aa9.22□□□□□ -0.93
TOP3A-215ENST00000583328 TMEM229BQ8NBD8 167 aa9.22□□□□□ -0.93
TOP3A-215ENST00000583328 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.22□□□□□ -0.93
TOP3A-215ENST00000583328 OR2D2Q9H210 308 aa9.22□□□□□ -0.93
TOP3A-215ENST00000583328 ZC4H2Q9NQZ6 224 aa9.22□□□□□ -0.93
TOP3A-215ENST00000583328 RBM7Q9Y580 266 aaKnown RBP9.22□□□□□ -0.93
TOP3A-215ENST00000583328 MPPED1O15442 326 aa9.21□□□□□ -0.94
TOP3A-215ENST00000583328 PPYP01298 95 aa9.21□□□□□ -0.94
TOP3A-215ENST00000583328 IGLV2-23P01705 113 aa9.21□□□□□ -0.94
TOP3A-215ENST00000583328 CRYGBP07316 175 aa9.21□□□□□ -0.94
TOP3A-215ENST00000583328 RFX2P48378 723 aa9.21□□□□□ -0.94
TOP3A-215ENST00000583328 TAS2R19P59542 299 aa9.21□□□□□ -0.94
TOP3A-215ENST00000583328 RHOGP84095 191 aa9.21□□□□□ -0.94
TOP3A-215ENST00000583328 TNFRSF9Q07011 255 aa9.21□□□□□ -0.94
TOP3A-215ENST00000583328 EXOSC2Q13868 293 aaKnown RBP9.21□□□□□ -0.94
TOP3A-215ENST00000583328 PYDC2Q56P42 97 aa9.21□□□□□ -0.94
TOP3A-215ENST00000583328 RNASE10Q5GAN6 216 aaKnown RBP9.21□□□□□ -0.94
TOP3A-215ENST00000583328 LGALS9CQ6DKI2 356 aa9.21□□□□□ -0.94
TOP3A-215ENST00000583328 LYG2Q86SG7 212 aa9.21□□□□□ -0.94
TOP3A-215ENST00000583328 ADAD2Q8NCV1 583 aaKnown RBP9.21□□□□□ -0.94
TOP3A-215ENST00000583328 OR52B4Q8NGK2 314 aa9.21□□□□□ -0.94
TOP3A-215ENST00000583328 GIMAP1Q8WWP7 306 aa9.21□□□□□ -0.94
TOP3A-215ENST00000583328 AKIP1Q9NQ31 210 aa9.21□□□□□ -0.94
TOP3A-215ENST00000583328 TAS2R8Q9NYW2 309 aa9.21□□□□□ -0.94
TOP3A-215ENST00000583328 SELENOKQ9Y6D0 94 aa9.21□□□□□ -0.94
TOP3A-215ENST00000583328 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.2□□□□□ -0.94
TOP3A-215ENST00000583328 IGKV1D-13A0A0B4J2D9 117 aa9.2□□□□□ -0.94
TOP3A-215ENST00000583328 FAM223BA6NKX1 122 aa9.2□□□□□ -0.94
TOP3A-215ENST00000583328 M0R1X1 148 aa9.2□□□□□ -0.94
TOP3A-215ENST00000583328 SLC22A5O76082 557 aa9.2□□□□□ -0.94
TOP3A-215ENST00000583328 PRH1P02810 166 aa9.2□□□□□ -0.94
TOP3A-215ENST00000583328 CD74P04233 296 aa9.2□□□□□ -0.94
TOP3A-215ENST00000583328 CD3DP04234 171 aa9.2□□□□□ -0.94
TOP3A-215ENST00000583328 OR9G9P0C7N8 305 aa9.2□□□□□ -0.94
TOP3A-215ENST00000583328 IGKV1-13P0DP09 117 aa9.2□□□□□ -0.94
TOP3A-215ENST00000583328 EDN2P20800 178 aa9.2□□□□□ -0.94
TOP3A-215ENST00000583328 BMI1P35226 326 aa9.2□□□□□ -0.94
TOP3A-215ENST00000583328 HERV-K104P61576 105 aa9.2□□□□□ -0.94
TOP3A-215ENST00000583328 ZNF45Q02386 682 aa9.2□□□□□ -0.94
TOP3A-215ENST00000583328 DHRS11Q6UWP2 260 aa9.2□□□□□ -0.94
TOP3A-215ENST00000583328 FAM223AQ8IWN6 122 aa9.2□□□□□ -0.94
TOP3A-215ENST00000583328 ZNF645Q8N7E2 425 aa9.2□□□□□ -0.94
TOP3A-215ENST00000583328 OR6F1Q8NGZ6 308 aa9.2□□□□□ -0.94
TOP3A-215ENST00000583328 HARBI1Q96MB7 349 aa9.2□□□□□ -0.94
TOP3A-215ENST00000583328 ZNF2Q9BSG1 426 aaPredicted RBP9.2□□□□□ -0.94
TOP3A-215ENST00000583328 SRRQ9GZT4 340 aa9.2□□□□□ -0.94
TOP3A-215ENST00000583328 SDHAF2Q9NX18 166 aa9.2□□□□□ -0.94
TOP3A-215ENST00000583328 ANKRD20A5PA0PJZ0 165 aa9.19□□□□□ -0.94
TOP3A-215ENST00000583328 J3QRK9 145 aa9.19□□□□□ -0.94
TOP3A-215ENST00000583328 M0QYG6 137 aa9.19□□□□□ -0.94
TOP3A-215ENST00000583328 SHOXO15266 292 aa9.19□□□□□ -0.94
TOP3A-215ENST00000583328 SPRY2O43597 315 aa9.19□□□□□ -0.94
TOP3A-215ENST00000583328 OR2C1O95371 312 aa9.19□□□□□ -0.94
TOP3A-215ENST00000583328 TSPAN5P62079 268 aa9.19□□□□□ -0.94
TOP3A-215ENST00000583328 CBX3Q13185 183 aa9.19□□□□□ -0.94
TOP3A-215ENST00000583328 MEF2DQ14814 521 aa9.19□□□□□ -0.94
TOP3A-215ENST00000583328 MSMO1Q15800 293 aa9.19□□□□□ -0.94
TOP3A-215ENST00000583328 TNXAQ16473 311 aa9.19□□□□□ -0.94
TOP3A-215ENST00000583328 ANKRD55Q3KP44 614 aa9.19□□□□□ -0.94
TOP3A-215ENST00000583328 ZNF57Q68EA5 555 aaPredicted RBP9.19□□□□□ -0.94
TOP3A-215ENST00000583328 STEAP1BQ6NZ63 245 aa9.19□□□□□ -0.94
TOP3A-215ENST00000583328 TMEM17Q86X19 198 aa9.19□□□□□ -0.94
TOP3A-215ENST00000583328 WFDC3Q8IUB2 231 aa9.19□□□□□ -0.94
TOP3A-215ENST00000583328 ARRDC1Q8N5I2 433 aa9.19□□□□□ -0.94
TOP3A-215ENST00000583328 GDPD1Q8N9F7 314 aa9.19□□□□□ -0.94
TOP3A-215ENST00000583328 TRIM63Q969Q1 353 aa9.19□□□□□ -0.94
TOP3A-215ENST00000583328 MOB3AQ96BX8 217 aa9.19□□□□□ -0.94
TOP3A-215ENST00000583328 PCLOQ9Y6V0 5065 aa9.18□□□□□ -0.94
TOP3A-215ENST00000583328 SRRM4A7MD48 611 aaKnown RBP9.18□□□□□ -0.94
TOP3A-215ENST00000583328 PPP5D1E7EU14 171 aa9.18□□□□□ -0.94
TOP3A-215ENST00000583328 GGCTO75223 188 aaKnown RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms