RNA–Protein interactions for RNA: ENST00000582885.1

CCDC57-216, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-216ENST00000582885 GSX1Q9H4S2 264 aaPredicted RBP9.56□□□□□ -0.88
CCDC57-216ENST00000582885 ZNF430Q9H8G1 570 aaPredicted RBP9.56□□□□□ -0.88
CCDC57-216ENST00000582885 RANGRFQ9HD47 186 aaPredicted RBP9.56□□□□□ -0.88
CCDC57-216ENST00000582885 VPREB3Q9UKI3 123 aa9.56□□□□□ -0.88
CCDC57-216ENST00000582885 SVEP1Q4LDE5 3571 aa9.55□□□□□ -0.88
CCDC57-216ENST00000582885 PFDN1O60925 122 aa9.55□□□□□ -0.88
CCDC57-216ENST00000582885 RBMXL2O75526 392 aaKnown RBP9.55□□□□□ -0.88
CCDC57-216ENST00000582885 LY86O95711 162 aa9.55□□□□□ -0.88
CCDC57-216ENST00000582885 HLA-DRB1P01911 266 aa9.55□□□□□ -0.88
CCDC57-216ENST00000582885 MBPP02686 304 aaPredicted RBP9.55□□□□□ -0.88
CCDC57-216ENST00000582885 PSMB6P28072 239 aa9.55□□□□□ -0.88
CCDC57-216ENST00000582885 SPCS3P61009 180 aa9.55□□□□□ -0.88
CCDC57-216ENST00000582885 HSPE1P61604 102 aaKnown RBP9.55□□□□□ -0.88
CCDC57-216ENST00000582885 PLGLAQ15195 96 aa9.55□□□□□ -0.88
CCDC57-216ENST00000582885 CXorf66Q5JRM2 361 aaPredicted RBP9.55□□□□□ -0.88
CCDC57-216ENST00000582885 ZNF562Q6V9R5 426 aa9.55□□□□□ -0.88
CCDC57-216ENST00000582885 RBMS3Q6XE24 437 aaKnown RBP9.55□□□□□ -0.88
CCDC57-216ENST00000582885 C5orf56Q8N8D9 126 aa9.55□□□□□ -0.88
CCDC57-216ENST00000582885 OR1L8Q8NGR8 309 aa9.55□□□□□ -0.88
CCDC57-216ENST00000582885 PPP1R1CQ8WVI7 109 aa9.55□□□□□ -0.88
CCDC57-216ENST00000582885 WDR89Q96FK6 387 aaPredicted RBP9.55□□□□□ -0.88
CCDC57-216ENST00000582885 RASL11BQ9BPW5 248 aa9.55□□□□□ -0.88
CCDC57-216ENST00000582885 QTRT1Q9BXR0 403 aaKnown RBP9.55□□□□□ -0.88
CCDC57-216ENST00000582885 COMMD5Q9GZQ3 224 aa9.55□□□□□ -0.88
CCDC57-216ENST00000582885 TPSG1Q9NRR2 321 aa9.55□□□□□ -0.88
CCDC57-216ENST00000582885 NSG2Q9Y328 171 aa9.55□□□□□ -0.88
CCDC57-216ENST00000582885 OR51B2Q9Y5P1 312 aa9.55□□□□□ -0.88
CCDC57-216ENST00000582885 TEX50A0A1B0GTY4 177 aa9.54□□□□□ -0.88
CCDC57-216ENST00000582885 CLDN34H7C241 214 aa9.54□□□□□ -0.88
CCDC57-216ENST00000582885 HOXA3O43365 443 aaPredicted RBP9.54□□□□□ -0.88
CCDC57-216ENST00000582885 ACTL6BO94805 426 aa9.54□□□□□ -0.88
CCDC57-216ENST00000582885 MPC2O95563 127 aa9.54□□□□□ -0.88
CCDC57-216ENST00000582885 PET100P0DJ07 73 aa9.54□□□□□ -0.88
CCDC57-216ENST00000582885 COMPP49747 757 aaPredicted RBP9.54□□□□□ -0.88
CCDC57-216ENST00000582885 OR2B8PP59922 312 aa9.54□□□□□ -0.88
CCDC57-216ENST00000582885 PJVKQ0ZLH3 352 aa9.54□□□□□ -0.88
CCDC57-216ENST00000582885 RAB32Q13637 225 aa9.54□□□□□ -0.88
CCDC57-216ENST00000582885 LY6EQ16553 131 aa9.54□□□□□ -0.88
CCDC57-216ENST00000582885 TMEM219Q86XT9 240 aa9.54□□□□□ -0.88
CCDC57-216ENST00000582885 OR2T35Q8NGX2 323 aa9.54□□□□□ -0.88
CCDC57-216ENST00000582885 FN1P02751 2386 aaKnown RBP9.53□□□□□ -0.88
CCDC57-216ENST00000582885 INAFM1C9JVW0 142 aa9.53□□□□□ -0.88
CCDC57-216ENST00000582885 INS-IGF2F8WCM5 200 aa9.53□□□□□ -0.88
CCDC57-216ENST00000582885 K7EPK0 472 aa9.53□□□□□ -0.88
CCDC57-216ENST00000582885 FCN1O00602 326 aa9.53□□□□□ -0.88
CCDC57-216ENST00000582885 SYNGR2O43760 224 aa9.53□□□□□ -0.88
CCDC57-216ENST00000582885 IFNA17P01571 189 aa9.53□□□□□ -0.88
CCDC57-216ENST00000582885 RLN2P04090 185 aa9.53□□□□□ -0.88
CCDC57-216ENST00000582885 AMY1AP04745 511 aa9.53□□□□□ -0.88
CCDC57-216ENST00000582885 FAM157CP0CG43 387 aa9.53□□□□□ -0.88
CCDC57-216ENST00000582885 LYL1P12980 280 aa9.53□□□□□ -0.88
CCDC57-216ENST00000582885 SSBP2P81877 361 aaPredicted RBP9.53□□□□□ -0.88
CCDC57-216ENST00000582885 PRCDQ00LT1 54 aa9.53□□□□□ -0.88
CCDC57-216ENST00000582885 ZNF418Q8TF45 676 aaPredicted RBP9.53□□□□□ -0.88
CCDC57-216ENST00000582885 PPP1R14BQ96C90 147 aa9.53□□□□□ -0.88
CCDC57-216ENST00000582885 RAB40CQ96S21 281 aa9.53□□□□□ -0.88
CCDC57-216ENST00000582885 SRSF8Q9BRL6 282 aaKnown RBP9.53□□□□□ -0.88
CCDC57-216ENST00000582885 NDUFA4L2Q9NRX3 87 aa9.53□□□□□ -0.88
CCDC57-216ENST00000582885 RCL1Q9Y2P8 373 aaKnown RBP9.53□□□□□ -0.88
CCDC57-216ENST00000582885 TRAV14DV4A0A0A6YYC5 116 aa9.52□□□□□ -0.89
CCDC57-216ENST00000582885 G3V3Q6 166 aa9.52□□□□□ -0.89
CCDC57-216ENST00000582885 WRBO00258 174 aa9.52□□□□□ -0.89
CCDC57-216ENST00000582885 CHST1O43916 411 aa9.52□□□□□ -0.89
CCDC57-216ENST00000582885 CRLF1O75462 422 aa9.52□□□□□ -0.89
CCDC57-216ENST00000582885 DEDDO75618 318 aa9.52□□□□□ -0.89
CCDC57-216ENST00000582885 SCGB1D2O95969 90 aa9.52□□□□□ -0.89
CCDC57-216ENST00000582885 CA2P00918 260 aa9.52□□□□□ -0.89
CCDC57-216ENST00000582885 C1QBP02746 253 aa9.52□□□□□ -0.89
CCDC57-216ENST00000582885 SLC25A4P12235 298 aa9.52□□□□□ -0.89
CCDC57-216ENST00000582885 PVALBP20472 110 aaPredicted RBP9.52□□□□□ -0.89
CCDC57-216ENST00000582885 RPL27AP46776 148 aaKnown RBP9.52□□□□□ -0.89
CCDC57-216ENST00000582885 TAS2R30P59541 319 aa9.52□□□□□ -0.89
CCDC57-216ENST00000582885 TNXAQ16473 311 aa9.52□□□□□ -0.89
CCDC57-216ENST00000582885 C11orf87Q6NUJ2 197 aa9.52□□□□□ -0.89
CCDC57-216ENST00000582885 PRSS54Q6PEW0 395 aa9.52□□□□□ -0.89
CCDC57-216ENST00000582885 Q71RC1 249 aaPredicted RBP9.52□□□□□ -0.89
CCDC57-216ENST00000582885 HSD17B13Q7Z5P4 300 aaPredicted RBP9.52□□□□□ -0.89
CCDC57-216ENST00000582885 MRPL41Q8IXM3 137 aaKnown RBP9.52□□□□□ -0.89
CCDC57-216ENST00000582885 THAP6Q8TBB0 222 aa9.52□□□□□ -0.89
CCDC57-216ENST00000582885 SRSF12Q8WXF0 261 aaKnown RBP9.52□□□□□ -0.89
CCDC57-216ENST00000582885 SMIM8Q96KF7 97 aa9.52□□□□□ -0.89
CCDC57-216ENST00000582885 CIB3Q96Q77 187 aaPredicted RBP9.52□□□□□ -0.89
CCDC57-216ENST00000582885 CLCC1Q96S66 551 aa9.52□□□□□ -0.89
CCDC57-216ENST00000582885 RNF126Q9BV68 326 aa9.52□□□□□ -0.89
CCDC57-216ENST00000582885 RBKSQ9H477 322 aa9.52□□□□□ -0.89
CCDC57-216ENST00000582885 C11orf1Q9H5F2 150 aa9.52□□□□□ -0.89
CCDC57-216ENST00000582885 WSB1Q9Y6I7 421 aa9.52□□□□□ -0.89
CCDC57-216ENST00000582885 NF1P21359 2839 aa9.52□□□□□ -0.89
CCDC57-216ENST00000582885 ANK3Q12955 4377 aaKnown RBP9.52□□□□□ -0.89
CCDC57-216ENST00000582885 IGHV7-81A0A0B4J1V7 117 aa9.51□□□□□ -0.89
CCDC57-216ENST00000582885 A0A1W2PN81 502 aa9.51□□□□□ -0.89
CCDC57-216ENST00000582885 DNAJC9-AS1A6NH13 148 aa9.51□□□□□ -0.89
CCDC57-216ENST00000582885 CGB1A6NKQ9 187 aa9.51□□□□□ -0.89
CCDC57-216ENST00000582885 E5RGE8 158 aa9.51□□□□□ -0.89
CCDC57-216ENST00000582885 H0YIZ8 118 aa9.51□□□□□ -0.89
CCDC57-216ENST00000582885 CNIH1O95406 144 aa9.51□□□□□ -0.89
CCDC57-216ENST00000582885 MYOD1P15172 320 aa9.51□□□□□ -0.89
CCDC57-216ENST00000582885 CHRNA7P36544 502 aa9.51□□□□□ -0.89
CCDC57-216ENST00000582885 VDAC2P45880 294 aaPredicted RBP9.51□□□□□ -0.89
CCDC57-216ENST00000582885 ATP5IP56385 69 aaPredicted RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms