RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 TRAV3A0A0B4J244 114 aa10.12□□□□□ -0.79
SRSF1-204ENST00000581979 CEBPZOSA8MTT3 80 aa10.12□□□□□ -0.79
SRSF1-204ENST00000581979 TAAR5O14804 337 aa10.12□□□□□ -0.79
SRSF1-204ENST00000581979 VENTXO95231 258 aa10.12□□□□□ -0.79
SRSF1-204ENST00000581979 SPDEFO95238 335 aa10.12□□□□□ -0.79
SRSF1-204ENST00000581979 IFNA7P01567 189 aa10.12□□□□□ -0.79
SRSF1-204ENST00000581979 IFNA17P01571 189 aa10.12□□□□□ -0.79
SRSF1-204ENST00000581979 PAX9P55771 341 aa10.12□□□□□ -0.79
SRSF1-204ENST00000581979 LGALS4P56470 323 aa10.12□□□□□ -0.79
SRSF1-204ENST00000581979 EWSR1Q01844 656 aaKnown RBP eCLIP10.12□□□□□ -0.79
SRSF1-204ENST00000581979 SMIM3Q9BZL3 60 aa10.12□□□□□ -0.79
SRSF1-204ENST00000581979 MS4A7Q9GZW8 240 aaPredicted RBP10.12□□□□□ -0.79
SRSF1-204ENST00000581979 NUP50Q9UKX7 468 aa10.12□□□□□ -0.79
SRSF1-204ENST00000581979 HILPDAQ9Y5L2 63 aa10.12□□□□□ -0.79
SRSF1-204ENST00000581979 WSB1Q9Y6I7 421 aa10.12□□□□□ -0.79
SRSF1-204ENST00000581979 ANK2Q01484 3957 aa10.11□□□□□ -0.79
SRSF1-204ENST00000581979 IGSF23A1L1A6 192 aa10.11□□□□□ -0.79
SRSF1-204ENST00000581979 C15orf61A6NNL5 157 aa10.11□□□□□ -0.79
SRSF1-204ENST00000581979 SRRM4A7MD48 611 aaKnown RBP10.11□□□□□ -0.79
SRSF1-204ENST00000581979 H3BP45 60 aa10.11□□□□□ -0.79
SRSF1-204ENST00000581979 TMEM50AO95807 157 aa10.11□□□□□ -0.79
SRSF1-204ENST00000581979 CFDP00746 253 aaPredicted RBP10.11□□□□□ -0.79
SRSF1-204ENST00000581979 SAA1P0DJI8 122 aaPredicted RBP10.11□□□□□ -0.79
SRSF1-204ENST00000581979 EXOSC2Q13868 293 aaKnown RBP10.11□□□□□ -0.79
SRSF1-204ENST00000581979 SPINK9Q5DT21 86 aa10.11□□□□□ -0.79
SRSF1-204ENST00000581979 LHFPL4Q7Z7J7 247 aa10.11□□□□□ -0.79
SRSF1-204ENST00000581979 TMEM252Q8N6L7 170 aa10.11□□□□□ -0.79
SRSF1-204ENST00000581979 ZNF680Q8NEM1 530 aa10.11□□□□□ -0.79
SRSF1-204ENST00000581979 DTD1Q8TEA8 209 aa10.11□□□□□ -0.79
SRSF1-204ENST00000581979 ZNF418Q8TF45 676 aaPredicted RBP10.11□□□□□ -0.79
SRSF1-204ENST00000581979 ST8SIA2Q92186 375 aa10.11□□□□□ -0.79
SRSF1-204ENST00000581979 SMIM8Q96KF7 97 aa10.11□□□□□ -0.79
SRSF1-204ENST00000581979 FBXL17Q9UF56 701 aa10.11□□□□□ -0.79
SRSF1-204ENST00000581979 A0A1W2PPI3 338 aa10.1□□□□□ -0.79
SRSF1-204ENST00000581979 UPK2O00526 184 aa10.1□□□□□ -0.79
SRSF1-204ENST00000581979 FSHBP01225 129 aa10.1□□□□□ -0.79
SRSF1-204ENST00000581979 UBE2E1P51965 193 aa10.1□□□□□ -0.79
SRSF1-204ENST00000581979 TAS2R30P59541 319 aa10.1□□□□□ -0.79
SRSF1-204ENST00000581979 SPCS3P61009 180 aa10.1□□□□□ -0.79
SRSF1-204ENST00000581979 NHLH2Q02577 135 aa10.1□□□□□ -0.79
SRSF1-204ENST00000581979 LDLRAD2Q5SZI1 272 aa10.1□□□□□ -0.79
SRSF1-204ENST00000581979 MINOS1Q5TGZ0 78 aa10.1□□□□□ -0.79
SRSF1-204ENST00000581979 ZNF429Q86V71 674 aa10.1□□□□□ -0.79
SRSF1-204ENST00000581979 OR52E5Q8NH55 327 aa10.1□□□□□ -0.79
SRSF1-204ENST00000581979 VSTM2AQ8TAG5 236 aa10.1□□□□□ -0.79
SRSF1-204ENST00000581979 NANPQ8TBE9 248 aa10.1□□□□□ -0.79
SRSF1-204ENST00000581979 ZDHHC16Q969W1 377 aa10.1□□□□□ -0.79
SRSF1-204ENST00000581979 CIB3Q96Q77 187 aaPredicted RBP10.1□□□□□ -0.79
SRSF1-204ENST00000581979 CLCC1Q96S66 551 aa10.1□□□□□ -0.79
SRSF1-204ENST00000581979 C7orf69Q9H7B7 122 aa10.1□□□□□ -0.79
SRSF1-204ENST00000581979 BET1LQ9NYM9 111 aa10.1□□□□□ -0.79
SRSF1-204ENST00000581979 CACFD1Q9UGQ2 172 aa10.1□□□□□ -0.79
SRSF1-204ENST00000581979 UBQLN2Q9UHD9 624 aa10.1□□□□□ -0.79
SRSF1-204ENST00000581979 MINOS1-NBL1R4GNA1 71 aa10.1□□□□□ -0.79
SRSF1-204ENST00000581979 KBTBD11O94819 623 aa10.1□□□□□ -0.79
SRSF1-204ENST00000581979 HILS1P60008 231 aa10.1□□□□□ -0.79
SRSF1-204ENST00000581979 PAX8Q06710 450 aa10.1□□□□□ -0.79
SRSF1-204ENST00000581979 BAXQ07812 192 aa10.1□□□□□ -0.79
SRSF1-204ENST00000581979 VMA21Q3ZAQ7 101 aa10.1□□□□□ -0.79
SRSF1-204ENST00000581979 AARDQ4LEZ3 155 aa10.1□□□□□ -0.79
SRSF1-204ENST00000581979 SPANXN5Q5MJ07 72 aa10.1□□□□□ -0.79
SRSF1-204ENST00000581979 STX12Q86Y82 276 aa10.1□□□□□ -0.79
SRSF1-204ENST00000581979 PUSL1Q8N0Z8 303 aaKnown RBP10.1□□□□□ -0.79
SRSF1-204ENST00000581979 OR8H3Q8N146 312 aa10.1□□□□□ -0.79
SRSF1-204ENST00000581979 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.1□□□□□ -0.79
SRSF1-204ENST00000581979 BSCL2Q96G97 398 aaPredicted RBP10.1□□□□□ -0.79
SRSF1-204ENST00000581979 CYTL1Q9NRR1 136 aa10.1□□□□□ -0.79
SRSF1-204ENST00000581979 PRNDQ9UKY0 176 aa10.1□□□□□ -0.79
SRSF1-204ENST00000581979 FOXA2Q9Y261 457 aaPredicted RBP10.1□□□□□ -0.79
SRSF1-204ENST00000581979 TBL2Q9Y4P3 447 aaKnown RBP10.1□□□□□ -0.79
SRSF1-204ENST00000581979 OR51B2Q9Y5P1 312 aa10.1□□□□□ -0.79
SRSF1-204ENST00000581979 TIMM23O14925 209 aa10.09□□□□□ -0.79
SRSF1-204ENST00000581979 CST7O76096 145 aa10.09□□□□□ -0.79
SRSF1-204ENST00000581979 IL6RP08887 468 aaPredicted RBP10.09□□□□□ -0.79
SRSF1-204ENST00000581979 TPT1P13693 172 aaKnown RBP10.09□□□□□ -0.79
SRSF1-204ENST00000581979 LGALS7P47929 136 aa10.09□□□□□ -0.79
SRSF1-204ENST00000581979 EIF5AP63241 154 aaKnown RBP10.09□□□□□ -0.79
SRSF1-204ENST00000581979 TMEM267Q0VDI3 215 aaPredicted RBP10.09□□□□□ -0.79
SRSF1-204ENST00000581979 SSX2Q16385 188 aa10.09□□□□□ -0.79
SRSF1-204ENST00000581979 CCDC144NLQ6NUI1 221 aa10.09□□□□□ -0.79
SRSF1-204ENST00000581979 OR4A5Q8NH83 315 aa10.09□□□□□ -0.79
SRSF1-204ENST00000581979 OOSP1A8MZH6 123 aa10.08□□□□□ -0.8
SRSF1-204ENST00000581979 FGF2P09038 288 aa10.08□□□□□ -0.8
SRSF1-204ENST00000581979 HOXA1P49639 335 aaPredicted RBP10.08□□□□□ -0.8
SRSF1-204ENST00000581979 SULT1A1P50225 295 aa10.08□□□□□ -0.8
SRSF1-204ENST00000581979 RPL7L1Q6DKI1 246 aaKnown RBP10.08□□□□□ -0.8
SRSF1-204ENST00000581979 ALKAL2Q6UX46 152 aa10.08□□□□□ -0.8
SRSF1-204ENST00000581979 STOML3Q8TAV4 291 aa10.08□□□□□ -0.8
SRSF1-204ENST00000581979 JMJD8Q96S16 334 aa10.08□□□□□ -0.8
SRSF1-204ENST00000581979 HIPK2Q9H2X6 1198 aa10.08□□□□□ -0.8
SRSF1-204ENST00000581979 ENY2Q9NPA8 101 aa10.08□□□□□ -0.8
SRSF1-204ENST00000581979 TMEM14BQ9NUH8 114 aa10.08□□□□□ -0.8
SRSF1-204ENST00000581979 FKBP11Q9NYL4 201 aa10.08□□□□□ -0.8
SRSF1-204ENST00000581979 TCF19Q9Y242 345 aa10.08□□□□□ -0.8
SRSF1-204ENST00000581979 TET2Q6N021 2002 aaPredicted RBP10.08□□□□□ -0.8
SRSF1-204ENST00000581979 BORCS7-ASMTA0A0B4J1R7 106 aa10.07□□□□□ -0.8
SRSF1-204ENST00000581979 SLC25A17O43808 307 aa10.07□□□□□ -0.8
SRSF1-204ENST00000581979 JTBO76095 146 aa10.07□□□□□ -0.8
SRSF1-204ENST00000581979 LY86O95711 162 aa10.07□□□□□ -0.8
SRSF1-204ENST00000581979 IGLV2-23P01705 113 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms