RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-222ENST00000581708 DGCR14Q96DF8 476 aaKnown RBP9.63□□□□□ -0.87
CDK5RAP3-222ENST00000581708 GPHA2Q96T91 129 aa9.63□□□□□ -0.87
CDK5RAP3-222ENST00000581708 BCL7BQ9BQE9 202 aa9.63□□□□□ -0.87
CDK5RAP3-222ENST00000581708 COMMD5Q9GZQ3 224 aa9.63□□□□□ -0.87
CDK5RAP3-222ENST00000581708 HMX3A6NHT5 357 aa9.62□□□□□ -0.87
CDK5RAP3-222ENST00000581708 HPGDSO60760 199 aa9.62□□□□□ -0.87
CDK5RAP3-222ENST00000581708 FCER2P06734 321 aa9.62□□□□□ -0.87
CDK5RAP3-222ENST00000581708 SPNP16150 400 aa9.62□□□□□ -0.87
CDK5RAP3-222ENST00000581708 HLA-DMAP28067 261 aa9.62□□□□□ -0.87
CDK5RAP3-222ENST00000581708 ALDH3B2P48448 385 aa9.62□□□□□ -0.87
CDK5RAP3-222ENST00000581708 SYNJ2BPP57105 145 aa9.62□□□□□ -0.87
CDK5RAP3-222ENST00000581708 OR2B8PP59922 312 aa9.62□□□□□ -0.87
CDK5RAP3-222ENST00000581708 SSX9Q7RTT3 188 aa9.62□□□□□ -0.87
CDK5RAP3-222ENST00000581708 GPR141Q7Z602 305 aa9.62□□□□□ -0.87
CDK5RAP3-222ENST00000581708 DMBX1Q8NFW5 382 aa9.62□□□□□ -0.87
CDK5RAP3-222ENST00000581708 CXorf58Q96LI9 332 aa9.62□□□□□ -0.87
CDK5RAP3-222ENST00000581708 TSC22D3Q99576 134 aa9.62□□□□□ -0.87
CDK5RAP3-222ENST00000581708 TMEM140Q9NV12 185 aa9.62□□□□□ -0.87
CDK5RAP3-222ENST00000581708 FKBP11Q9NYL4 201 aa9.62□□□□□ -0.87
CDK5RAP3-222ENST00000581708 THYN1Q9P016 225 aa9.62□□□□□ -0.87
CDK5RAP3-222ENST00000581708 FBXL7Q9UJT9 491 aa9.62□□□□□ -0.87
CDK5RAP3-222ENST00000581708 TRBV7-1A0A0A6YYK4 115 aa9.61□□□□□ -0.87
CDK5RAP3-222ENST00000581708 A0A1B0GW64 132 aa9.61□□□□□ -0.87
CDK5RAP3-222ENST00000581708 MARCH11A6NNE9 402 aa9.61□□□□□ -0.87
CDK5RAP3-222ENST00000581708 A8MZ25 164 aa9.61□□□□□ -0.87
CDK5RAP3-222ENST00000581708 FAM25AB3EWG3 89 aa9.61□□□□□ -0.87
CDK5RAP3-222ENST00000581708 FAM25CB3EWG5 89 aa9.61□□□□□ -0.87
CDK5RAP3-222ENST00000581708 FAM25GB3EWG6 89 aa9.61□□□□□ -0.87
CDK5RAP3-222ENST00000581708 LGALS9O00182 355 aa9.61□□□□□ -0.87
CDK5RAP3-222ENST00000581708 BMPR1BO00238 502 aa9.61□□□□□ -0.87
CDK5RAP3-222ENST00000581708 GGCTO75223 188 aaKnown RBP9.61□□□□□ -0.87
CDK5RAP3-222ENST00000581708 RBMXL2O75526 392 aaKnown RBP9.61□□□□□ -0.87
CDK5RAP3-222ENST00000581708 OR2J3O76001 311 aa9.61□□□□□ -0.87
CDK5RAP3-222ENST00000581708 S1PR2O95136 353 aa9.61□□□□□ -0.87
CDK5RAP3-222ENST00000581708 RLN1P04808 185 aa9.61□□□□□ -0.87
CDK5RAP3-222ENST00000581708 DEFA4P12838 97 aa9.61□□□□□ -0.87
CDK5RAP3-222ENST00000581708 PTBP1P26599 531 aaKnown RBP eCLIP9.61□□□□□ -0.87
CDK5RAP3-222ENST00000581708 LCN12Q6JVE5 192 aa9.61□□□□□ -0.87
CDK5RAP3-222ENST00000581708 IL34Q6ZMJ4 242 aa9.61□□□□□ -0.87
CDK5RAP3-222ENST00000581708 SNX29P2Q8IUI4 249 aa9.61□□□□□ -0.87
CDK5RAP3-222ENST00000581708 SLC38A6Q8IZM9 456 aa9.61□□□□□ -0.87
CDK5RAP3-222ENST00000581708 Q8N402 240 aa9.61□□□□□ -0.87
CDK5RAP3-222ENST00000581708 ARRDC1Q8N5I2 433 aa9.61□□□□□ -0.87
CDK5RAP3-222ENST00000581708 EEF1AKMT3Q96AZ1 226 aa9.61□□□□□ -0.87
CDK5RAP3-222ENST00000581708 ZNF486Q96H40 463 aaPredicted RBP9.61□□□□□ -0.87
CDK5RAP3-222ENST00000581708 WWC2-AS2Q96NR7 200 aa9.61□□□□□ -0.87
CDK5RAP3-222ENST00000581708 FANCD2OSQ96PS1 177 aa9.61□□□□□ -0.87
CDK5RAP3-222ENST00000581708 ATP6V0BQ99437 205 aa9.61□□□□□ -0.87
CDK5RAP3-222ENST00000581708 RSRP1Q9BUV0 290 aa9.61□□□□□ -0.87
CDK5RAP3-222ENST00000581708 QTRT1Q9BXR0 403 aaKnown RBP9.61□□□□□ -0.87
CDK5RAP3-222ENST00000581708 RABL2AQ9UBK7 228 aaPredicted RBP9.61□□□□□ -0.87
CDK5RAP3-222ENST00000581708 RABL2BQ9UNT1 228 aa9.61□□□□□ -0.87
CDK5RAP3-222ENST00000581708 DNAH9Q9NYC9 4486 aa9.61□□□□□ -0.87
CDK5RAP3-222ENST00000581708 IGLV11-55A0A075B6I3 123 aa9.6□□□□□ -0.87
CDK5RAP3-222ENST00000581708 E7EUB6 86 aa9.6□□□□□ -0.87
CDK5RAP3-222ENST00000581708 TRBV12-3P01733 135 aa9.6□□□□□ -0.87
CDK5RAP3-222ENST00000581708 PRH1P02810 166 aa9.6□□□□□ -0.87
CDK5RAP3-222ENST00000581708 IFNA6P05013 189 aa9.6□□□□□ -0.87
CDK5RAP3-222ENST00000581708 CSN3P07498 182 aa9.6□□□□□ -0.87
CDK5RAP3-222ENST00000581708 AREGP15514 252 aa9.6□□□□□ -0.87
CDK5RAP3-222ENST00000581708 MRPS10P82664 201 aaKnown RBP9.6□□□□□ -0.87
CDK5RAP3-222ENST00000581708 SSBP1Q04837 148 aaKnown RBP9.6□□□□□ -0.87
CDK5RAP3-222ENST00000581708 GPHB5Q86YW7 130 aa9.6□□□□□ -0.87
CDK5RAP3-222ENST00000581708 OR1L6Q8NGR2 347 aa9.6□□□□□ -0.87
CDK5RAP3-222ENST00000581708 OR1L8Q8NGR8 309 aa9.6□□□□□ -0.87
CDK5RAP3-222ENST00000581708 OR5B3Q8NH48 314 aa9.6□□□□□ -0.87
CDK5RAP3-222ENST00000581708 RAB2BQ8WUD1 216 aa9.6□□□□□ -0.87
CDK5RAP3-222ENST00000581708 NAA50Q9GZZ1 169 aaKnown RBP9.6□□□□□ -0.87
CDK5RAP3-222ENST00000581708 FXYD6Q9H0Q3 95 aa9.6□□□□□ -0.87
CDK5RAP3-222ENST00000581708 MTFP1Q9UDX5 166 aa9.6□□□□□ -0.87
CDK5RAP3-222ENST00000581708 PRNDQ9UKY0 176 aa9.6□□□□□ -0.87
CDK5RAP3-222ENST00000581708 IGLC7A0M8Q6 106 aa9.59□□□□□ -0.87
CDK5RAP3-222ENST00000581708 CGB1A6NKQ9 187 aa9.59□□□□□ -0.87
CDK5RAP3-222ENST00000581708 SNAPC5O75971 98 aa9.59□□□□□ -0.87
CDK5RAP3-222ENST00000581708 TRAPPC2P0DI81 140 aa9.59□□□□□ -0.87
CDK5RAP3-222ENST00000581708 TRAPPC2BP0DI82 140 aa9.59□□□□□ -0.87
CDK5RAP3-222ENST00000581708 LPAR6P43657 344 aa9.59□□□□□ -0.87
CDK5RAP3-222ENST00000581708 MECP2P51608 486 aaKnown RBP9.59□□□□□ -0.87
CDK5RAP3-222ENST00000581708 TMBIM6P55061 237 aa9.59□□□□□ -0.87
CDK5RAP3-222ENST00000581708 RND3P61587 244 aa9.59□□□□□ -0.87
CDK5RAP3-222ENST00000581708 ZNF585BQ52M93 769 aa9.59□□□□□ -0.87
CDK5RAP3-222ENST00000581708 RNASE10Q5GAN6 216 aaKnown RBP9.59□□□□□ -0.87
CDK5RAP3-222ENST00000581708 C11orf87Q6NUJ2 197 aa9.59□□□□□ -0.87
CDK5RAP3-222ENST00000581708 LAX1Q8IWV1 398 aa9.59□□□□□ -0.87
CDK5RAP3-222ENST00000581708 FCAMRQ8WWV6 532 aa9.59□□□□□ -0.87
CDK5RAP3-222ENST00000581708 EXTL2Q9UBQ6 330 aa9.59□□□□□ -0.87
CDK5RAP3-222ENST00000581708 DMRT1Q9Y5R6 373 aa9.59□□□□□ -0.87
CDK5RAP3-222ENST00000581708 U3KQK5 164 aa9.59□□□□□ -0.87
CDK5RAP3-222ENST00000581708 NDUFB8O95169 186 aa9.58□□□□□ -0.88
CDK5RAP3-222ENST00000581708 KRASP01116 189 aa9.58□□□□□ -0.88
CDK5RAP3-222ENST00000581708 RPA2P15927 270 aa9.58□□□□□ -0.88
CDK5RAP3-222ENST00000581708 DEFA5Q01523 94 aa9.58□□□□□ -0.88
CDK5RAP3-222ENST00000581708 FAM106AQ4KMX7 169 aa9.58□□□□□ -0.88
CDK5RAP3-222ENST00000581708 SGPP2Q8IWX5 399 aa9.58□□□□□ -0.88
CDK5RAP3-222ENST00000581708 GDPD1Q8N9F7 314 aa9.58□□□□□ -0.88
CDK5RAP3-222ENST00000581708 VN1R17PQ8TDU5 208 aa9.58□□□□□ -0.88
CDK5RAP3-222ENST00000581708 LSM10Q969L4 123 aaKnown RBP9.58□□□□□ -0.88
CDK5RAP3-222ENST00000581708 TMEM56Q96MV1 263 aa9.58□□□□□ -0.88
CDK5RAP3-222ENST00000581708 NDUFA4L2Q9NRX3 87 aa9.58□□□□□ -0.88
CDK5RAP3-222ENST00000581708 TECRQ9NZ01 308 aaKnown RBP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms