RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 CCL13Q99616 98 aa8.66□□□□□ -1.02
TOP3A-209ENST00000580095 ACTR3CQ9C0K3 210 aaPredicted RBP8.66□□□□□ -1.02
TOP3A-209ENST00000580095 IFI27L2Q9H2X8 130 aa8.66□□□□□ -1.02
TOP3A-209ENST00000580095 RPH3ALQ9UNE2 315 aa8.66□□□□□ -1.02
TOP3A-209ENST00000580095 A0A1W2PPQ1 181 aa8.66□□□□□ -1.02
TOP3A-209ENST00000580095 AHRRA9YTQ3 701 aa8.66□□□□□ -1.02
TOP3A-209ENST00000580095 KLF3P57682 345 aaPredicted RBP8.66□□□□□ -1.02
TOP3A-209ENST00000580095 ZNF66Q6ZN08 573 aa8.66□□□□□ -1.02
TOP3A-209ENST00000580095 ZGRF1Q86YA3 2104 aa8.66□□□□□ -1.02
TOP3A-209ENST00000580095 ZADH2Q8N4Q0 377 aa8.66□□□□□ -1.02
TOP3A-209ENST00000580095 OR5R1Q8NH85 324 aa8.66□□□□□ -1.02
TOP3A-209ENST00000580095 TMEM170AQ8WVE7 144 aa8.66□□□□□ -1.02
TOP3A-209ENST00000580095 PCGF1Q9BSM1 259 aa8.66□□□□□ -1.02
TOP3A-209ENST00000580095 GSX1Q9H4S2 264 aaPredicted RBP8.66□□□□□ -1.02
TOP3A-209ENST00000580095 CALYQ9NYX4 217 aa8.66□□□□□ -1.02
TOP3A-209ENST00000580095 ZZEF1O43149 2961 aa8.66□□□□□ -1.02
TOP3A-209ENST00000580095 C11orf94C9JXX5 98 aa8.65□□□□□ -1.02
TOP3A-209ENST00000580095 PHOX2AO14813 284 aa8.65□□□□□ -1.02
TOP3A-209ENST00000580095 TM4SF5O14894 197 aa8.65□□□□□ -1.02
TOP3A-209ENST00000580095 CEACAM8P31997 349 aaPredicted RBP8.65□□□□□ -1.02
TOP3A-209ENST00000580095 CDC34P49427 236 aaPredicted RBP8.65□□□□□ -1.02
TOP3A-209ENST00000580095 CCL8P80075 99 aa8.65□□□□□ -1.02
TOP3A-209ENST00000580095 P2RY6Q15077 328 aa8.65□□□□□ -1.02
TOP3A-209ENST00000580095 CT45A1Q5HYN5 189 aa8.65□□□□□ -1.02
TOP3A-209ENST00000580095 LYG1Q8N1E2 194 aa8.65□□□□□ -1.02
TOP3A-209ENST00000580095 CT45A3Q8NHU0 189 aa8.65□□□□□ -1.02
TOP3A-209ENST00000580095 MS4A5Q9H3V2 200 aa8.65□□□□□ -1.02
TOP3A-209ENST00000580095 TMEM140Q9NV12 185 aa8.65□□□□□ -1.02
TOP3A-209ENST00000580095 NAT8Q9UHE5 227 aa8.65□□□□□ -1.02
TOP3A-209ENST00000580095 SVEP1Q4LDE5 3571 aa8.65□□□□□ -1.02
TOP3A-209ENST00000580095 MGST3O14880 152 aa8.65□□□□□ -1.03
TOP3A-209ENST00000580095 PPP1R2P9O14990 202 aa8.65□□□□□ -1.03
TOP3A-209ENST00000580095 TCF21O43680 179 aa8.65□□□□□ -1.03
TOP3A-209ENST00000580095 KBTBD11O94819 623 aa8.65□□□□□ -1.03
TOP3A-209ENST00000580095 GYPAP02724 150 aa8.65□□□□□ -1.03
TOP3A-209ENST00000580095 ADH4P08319 380 aa8.65□□□□□ -1.03
TOP3A-209ENST00000580095 FAM3BP58499 235 aaPredicted RBP8.65□□□□□ -1.03
TOP3A-209ENST00000580095 PNRC1Q12796 327 aaPredicted RBP8.65□□□□□ -1.03
TOP3A-209ENST00000580095 MOB3BQ86TA1 216 aa8.65□□□□□ -1.03
TOP3A-209ENST00000580095 FAM90A1Q86YD7 464 aa8.65□□□□□ -1.03
TOP3A-209ENST00000580095 CIB3Q96Q77 187 aaPredicted RBP8.65□□□□□ -1.03
TOP3A-209ENST00000580095 S1PR3Q99500 378 aa8.65□□□□□ -1.03
TOP3A-209ENST00000580095 ASH1LQ9NR48 2969 aaKnown RBP8.65□□□□□ -1.03
TOP3A-209ENST00000580095 SAA2-SAA4A0A096LPE2 208 aa8.64□□□□□ -1.03
TOP3A-209ENST00000580095 A0A0U1RQK1 487 aa8.64□□□□□ -1.03
TOP3A-209ENST00000580095 B4DEV8 164 aa8.64□□□□□ -1.03
TOP3A-209ENST00000580095 NDUFB4O95168 129 aa8.64□□□□□ -1.03
TOP3A-209ENST00000580095 SAA2P0DJI9 122 aaPredicted RBP8.64□□□□□ -1.03
TOP3A-209ENST00000580095 S100A7P31151 101 aa8.64□□□□□ -1.03
TOP3A-209ENST00000580095 HTD2P86397 168 aa8.64□□□□□ -1.03
TOP3A-209ENST00000580095 ZNF114Q8NC26 417 aa8.64□□□□□ -1.03
TOP3A-209ENST00000580095 RND1Q92730 232 aa8.64□□□□□ -1.03
TOP3A-209ENST00000580095 P2RX4Q99571 388 aa8.64□□□□□ -1.03
TOP3A-209ENST00000580095 SEPSECSQ9HD40 501 aaKnown RBP8.64□□□□□ -1.03
TOP3A-209ENST00000580095 TIMM9Q9Y5J7 89 aa8.64□□□□□ -1.03
TOP3A-209ENST00000580095 ABCA1O95477 2261 aa8.64□□□□□ -1.03
TOP3A-209ENST00000580095 TMEM238C9JI98 176 aa8.64□□□□□ -1.03
TOP3A-209ENST00000580095 H7BYZ3 331 aa8.64□□□□□ -1.03
TOP3A-209ENST00000580095 CD82P27701 267 aa8.64□□□□□ -1.03
TOP3A-209ENST00000580095 SPATA31B1PQ5VZV4 182 aa8.64□□□□□ -1.03
TOP3A-209ENST00000580095 TREML4Q6UXN2 200 aa8.64□□□□□ -1.03
TOP3A-209ENST00000580095 CYP2G1PQ6ZSU1 146 aa8.64□□□□□ -1.03
TOP3A-209ENST00000580095 CENPVQ7Z7K6 275 aaPredicted RBP8.64□□□□□ -1.03
TOP3A-209ENST00000580095 HIST3H2BBQ8N257 126 aa8.64□□□□□ -1.03
TOP3A-209ENST00000580095 OR4X1Q8NH49 305 aa8.64□□□□□ -1.03
TOP3A-209ENST00000580095 WFDC12Q8WWY7 111 aa8.64□□□□□ -1.03
TOP3A-209ENST00000580095 DIRC2Q96SL1 478 aa8.64□□□□□ -1.03
TOP3A-209ENST00000580095 ZNF318Q5VUA4 2279 aa8.64□□□□□ -1.03
TOP3A-209ENST00000580095 TET2Q6N021 2002 aaPredicted RBP8.64□□□□□ -1.03
TOP3A-209ENST00000580095 DCHS2Q6V1P9 2916 aa8.64□□□□□ -1.03
TOP3A-209ENST00000580095 A0A1W2PPV4 95 aa8.64□□□□□ -1.03
TOP3A-209ENST00000580095 HPRT1P00492 218 aa8.64□□□□□ -1.03
TOP3A-209ENST00000580095 ARL14EPLP0DKL9 152 aa8.64□□□□□ -1.03
TOP3A-209ENST00000580095 BMI1P35226 326 aa8.64□□□□□ -1.03
TOP3A-209ENST00000580095 GALR1P47211 349 aa8.64□□□□□ -1.03
TOP3A-209ENST00000580095 RND2P52198 227 aa8.64□□□□□ -1.03
TOP3A-209ENST00000580095 ERVK-16P61578 105 aa8.64□□□□□ -1.03
TOP3A-209ENST00000580095 RELBQ01201 579 aa8.64□□□□□ -1.03
TOP3A-209ENST00000580095 ATP6V1FQ16864 119 aa8.64□□□□□ -1.03
TOP3A-209ENST00000580095 C17orf58Q2M2W7 97 aa8.64□□□□□ -1.03
TOP3A-209ENST00000580095 OR13D1Q8NGV5 346 aa8.64□□□□□ -1.03
TOP3A-209ENST00000580095 WFIKKN1Q96NZ8 548 aa8.64□□□□□ -1.03
TOP3A-209ENST00000580095 MGST2Q99735 147 aa8.64□□□□□ -1.03
TOP3A-209ENST00000580095 GCM1Q9NP62 436 aa8.64□□□□□ -1.03
TOP3A-209ENST00000580095 MBD3L4A6NDZ8 208 aaPredicted RBP8.63□□□□□ -1.03
TOP3A-209ENST00000580095 MBD3L3A6NE82 208 aaPredicted RBP8.63□□□□□ -1.03
TOP3A-209ENST00000580095 MBD3L5A6NJ08 208 aaPredicted RBP8.63□□□□□ -1.03
TOP3A-209ENST00000580095 SEC14L6B5MCN3 397 aa8.63□□□□□ -1.03
TOP3A-209ENST00000580095 M0R143 59 aa8.63□□□□□ -1.03
TOP3A-209ENST00000580095 GFRA3O60609 400 aa8.63□□□□□ -1.03
TOP3A-209ENST00000580095 GNB2P62879 340 aa8.63□□□□□ -1.03
TOP3A-209ENST00000580095 MBD3L2Q8NHZ7 208 aaPredicted RBP8.63□□□□□ -1.03
TOP3A-209ENST00000580095 TMEM37Q8WXS4 190 aa8.63□□□□□ -1.03
TOP3A-209ENST00000580095 COL25A1Q9BXS0 654 aaPredicted RBP8.63□□□□□ -1.03
TOP3A-209ENST00000580095 TCF19Q9Y242 345 aa8.63□□□□□ -1.03
TOP3A-209ENST00000580095 WDR83OSQ9Y284 106 aa8.63□□□□□ -1.03
TOP3A-209ENST00000580095 ACTL6BO94805 426 aa8.63□□□□□ -1.03
TOP3A-209ENST00000580095 IGKV1-16P04430 117 aa8.63□□□□□ -1.03
TOP3A-209ENST00000580095 C1QTNF9P0C862 333 aa8.63□□□□□ -1.03
TOP3A-209ENST00000580095 GNB1P62873 340 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms