RNA–Protein interactions for RNA: ENST00000578996.1

CDK5RAP3-211, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-211ENST00000578996 RPL5P46777 297 aaKnown RBP6.96□□□□□ -1.3
CDK5RAP3-211ENST00000578996 SCAND1P57086 179 aa6.96□□□□□ -1.3
CDK5RAP3-211ENST00000578996 HERV-K104P61576 105 aa6.96□□□□□ -1.3
CDK5RAP3-211ENST00000578996 DEFB114Q30KQ6 69 aa6.96□□□□□ -1.3
CDK5RAP3-211ENST00000578996 AADACL3Q5VUY0 350 aa6.96□□□□□ -1.3
CDK5RAP3-211ENST00000578996 DMBX1Q8NFW5 382 aa6.96□□□□□ -1.3
CDK5RAP3-211ENST00000578996 WDR89Q96FK6 387 aaPredicted RBP6.96□□□□□ -1.3
CDK5RAP3-211ENST00000578996 CCDC140Q96MF4 163 aa6.96□□□□□ -1.3
CDK5RAP3-211ENST00000578996 FANCD2OSQ96PS1 177 aa6.96□□□□□ -1.3
CDK5RAP3-211ENST00000578996 AIFM2Q9BRQ8 373 aa6.96□□□□□ -1.3
CDK5RAP3-211ENST00000578996 SRD5A3Q9H8P0 318 aa6.96□□□□□ -1.3
CDK5RAP3-211ENST00000578996 A0A087WXM4 84 aa6.95□□□□□ -1.3
CDK5RAP3-211ENST00000578996 A0A0A6YYH2 397 aa6.95□□□□□ -1.3
CDK5RAP3-211ENST00000578996 SMIM31A0A1B0GVY4 71 aa6.95□□□□□ -1.3
CDK5RAP3-211ENST00000578996 MFSD2BA6NFX1 497 aa6.95□□□□□ -1.3
CDK5RAP3-211ENST00000578996 A6NJ64 397 aa6.95□□□□□ -1.3
CDK5RAP3-211ENST00000578996 ZNF785A8K8V0 405 aa6.95□□□□□ -1.3
CDK5RAP3-211ENST00000578996 LGALS9O00182 355 aa6.95□□□□□ -1.3
CDK5RAP3-211ENST00000578996 S1PR2O95136 353 aa6.95□□□□□ -1.3
CDK5RAP3-211ENST00000578996 HPRT1P00492 218 aa6.95□□□□□ -1.3
CDK5RAP3-211ENST00000578996 CRYGCP07315 174 aa6.95□□□□□ -1.3
CDK5RAP3-211ENST00000578996 NQO2P16083 231 aa6.95□□□□□ -1.3
CDK5RAP3-211ENST00000578996 HIST1H1BP16401 226 aaKnown RBP6.95□□□□□ -1.3
CDK5RAP3-211ENST00000578996 CTRB1P17538 263 aa6.95□□□□□ -1.3
CDK5RAP3-211ENST00000578996 CBLN1P23435 193 aa6.95□□□□□ -1.3
CDK5RAP3-211ENST00000578996 GPR183P32249 361 aa6.95□□□□□ -1.3
CDK5RAP3-211ENST00000578996 TGFBR1P36897 503 aa6.95□□□□□ -1.3
CDK5RAP3-211ENST00000578996 CBX5P45973 191 aa6.95□□□□□ -1.3
CDK5RAP3-211ENST00000578996 MECP2P51608 486 aaKnown RBP6.95□□□□□ -1.3
CDK5RAP3-211ENST00000578996 TAS2R31P59538 309 aa6.95□□□□□ -1.3
CDK5RAP3-211ENST00000578996 FAM106AQ4KMX7 169 aa6.95□□□□□ -1.3
CDK5RAP3-211ENST00000578996 CTRB2Q6GPI1 263 aa6.95□□□□□ -1.3
CDK5RAP3-211ENST00000578996 ZNF818PQ6ZRF7 136 aa6.95□□□□□ -1.3
CDK5RAP3-211ENST00000578996 LAX1Q8IWV1 398 aa6.95□□□□□ -1.3
CDK5RAP3-211ENST00000578996 ZBTB34Q8NCN2 500 aa6.95□□□□□ -1.3
CDK5RAP3-211ENST00000578996 TSPAN14Q8NG11 270 aa6.95□□□□□ -1.3
CDK5RAP3-211ENST00000578996 OR5AP2Q8NGF4 316 aa6.95□□□□□ -1.3
CDK5RAP3-211ENST00000578996 OR4A5Q8NH83 315 aa6.95□□□□□ -1.3
CDK5RAP3-211ENST00000578996 CXorf58Q96LI9 332 aa6.95□□□□□ -1.3
CDK5RAP3-211ENST00000578996 COMMD5Q9GZQ3 224 aa6.95□□□□□ -1.3
CDK5RAP3-211ENST00000578996 AUNIPQ9H7T9 357 aa6.95□□□□□ -1.3
CDK5RAP3-211ENST00000578996 BET1LQ9NYM9 111 aa6.95□□□□□ -1.3
CDK5RAP3-211ENST00000578996 TECRQ9NZ01 308 aaKnown RBP6.95□□□□□ -1.3
CDK5RAP3-211ENST00000578996 EHFQ9NZC4 300 aa6.95□□□□□ -1.3
CDK5RAP3-211ENST00000578996 DMRT1Q9Y5R6 373 aa6.95□□□□□ -1.3
CDK5RAP3-211ENST00000578996 IGLV11-55A0A075B6I3 123 aa6.94□□□□□ -1.3
CDK5RAP3-211ENST00000578996 TRBV7-1A0A0A6YYK4 115 aa6.94□□□□□ -1.3
CDK5RAP3-211ENST00000578996 TRAV3A0A0B4J244 114 aa6.94□□□□□ -1.3
CDK5RAP3-211ENST00000578996 IGHV3-35A0A0C4DH35 117 aa6.94□□□□□ -1.3
CDK5RAP3-211ENST00000578996 LCE6AA0A183 80 aa6.94□□□□□ -1.3
CDK5RAP3-211ENST00000578996 CGB1A6NKQ9 187 aa6.94□□□□□ -1.3
CDK5RAP3-211ENST00000578996 UPK2O00526 184 aa6.94□□□□□ -1.3
CDK5RAP3-211ENST00000578996 SCAF4O95104 1147 aaKnown RBP6.94□□□□□ -1.3
CDK5RAP3-211ENST00000578996 RLN1P04808 185 aa6.94□□□□□ -1.3
CDK5RAP3-211ENST00000578996 CLEC3BP05452 202 aa6.94□□□□□ -1.3
CDK5RAP3-211ENST00000578996 ALDH3B2P48448 385 aa6.94□□□□□ -1.3
CDK5RAP3-211ENST00000578996 OR2B8PP59922 312 aa6.94□□□□□ -1.3
CDK5RAP3-211ENST00000578996 ERVK-16P61578 105 aa6.94□□□□□ -1.3
CDK5RAP3-211ENST00000578996 LSM3P62310 102 aaKnown RBP6.94□□□□□ -1.3
CDK5RAP3-211ENST00000578996 MSMO1Q15800 293 aa6.94□□□□□ -1.3
CDK5RAP3-211ENST00000578996 ZNF57Q68EA5 555 aaPredicted RBP6.94□□□□□ -1.3
CDK5RAP3-211ENST00000578996 BTNL8Q6UX41 500 aa6.94□□□□□ -1.3
CDK5RAP3-211ENST00000578996 SLC16A13Q7RTY0 426 aa6.94□□□□□ -1.3
CDK5RAP3-211ENST00000578996 GPHB5Q86YW7 130 aa6.94□□□□□ -1.3
CDK5RAP3-211ENST00000578996 UXS1Q8NBZ7 420 aa6.94□□□□□ -1.3
CDK5RAP3-211ENST00000578996 OR52B4Q8NGK2 314 aa6.94□□□□□ -1.3
CDK5RAP3-211ENST00000578996 S100A16Q96FQ6 103 aaKnown RBP6.94□□□□□ -1.3
CDK5RAP3-211ENST00000578996 HINT2Q9BX68 163 aa6.94□□□□□ -1.3
CDK5RAP3-211ENST00000578996 HIPK2Q9H2X6 1198 aa6.94□□□□□ -1.3
CDK5RAP3-211ENST00000578996 TMEM140Q9NV12 185 aa6.94□□□□□ -1.3
CDK5RAP3-211ENST00000578996 SACSQ9NZJ4 4579 aa6.94□□□□□ -1.3
CDK5RAP3-211ENST00000578996 RYR2Q92736 4967 aa6.93□□□□□ -1.3
CDK5RAP3-211ENST00000578996 STARD9Q9P2P6 4700 aa6.93□□□□□ -1.3
CDK5RAP3-211ENST00000578996 TMEM213A2RRL7 107 aa6.93□□□□□ -1.3
CDK5RAP3-211ENST00000578996 RBMY1BA6NDE4 496 aaKnown RBP6.93□□□□□ -1.3
CDK5RAP3-211ENST00000578996 RBMY1EA6NEQ0 496 aaKnown RBP6.93□□□□□ -1.3
CDK5RAP3-211ENST00000578996 CYB5BO43169 146 aa6.93□□□□□ -1.3
CDK5RAP3-211ENST00000578996 RBFOX2O43251 390 aaKnown RBP eCLIP6.93□□□□□ -1.3
CDK5RAP3-211ENST00000578996 PMP2P02689 132 aa6.93□□□□□ -1.3
CDK5RAP3-211ENST00000578996 RBMY1DP0C7P1 496 aaKnown RBP6.93□□□□□ -1.3
CDK5RAP3-211ENST00000578996 RFX2P48378 723 aa6.93□□□□□ -1.3
CDK5RAP3-211ENST00000578996 ZNF585BQ52M93 769 aa6.93□□□□□ -1.3
CDK5RAP3-211ENST00000578996 TM4SF20Q53R12 229 aa6.93□□□□□ -1.3
CDK5RAP3-211ENST00000578996 UBE2NLQ5JXB2 153 aa6.93□□□□□ -1.3
CDK5RAP3-211ENST00000578996 TMEM69Q5SWH9 247 aa6.93□□□□□ -1.3
CDK5RAP3-211ENST00000578996 PLET1Q6UQ28 207 aa6.93□□□□□ -1.3
CDK5RAP3-211ENST00000578996 UNQ9165/PRO28630Q6UXU0 137 aa6.93□□□□□ -1.3
CDK5RAP3-211ENST00000578996 RBPMS2Q6ZRY4 209 aaKnown RBP6.93□□□□□ -1.3
CDK5RAP3-211ENST00000578996 TMEM61Q8N0U2 210 aa6.93□□□□□ -1.3
CDK5RAP3-211ENST00000578996 OR10W1Q8NGF6 305 aa6.93□□□□□ -1.3
CDK5RAP3-211ENST00000578996 OR5H2Q8NGV7 314 aa6.93□□□□□ -1.3
CDK5RAP3-211ENST00000578996 CD300LFQ8TDQ1 290 aa6.93□□□□□ -1.3
CDK5RAP3-211ENST00000578996 GIMAP1Q8WWP7 306 aa6.93□□□□□ -1.3
CDK5RAP3-211ENST00000578996 BORCS5Q969J3 196 aa6.93□□□□□ -1.3
CDK5RAP3-211ENST00000578996 ZNF2Q9BSG1 426 aaPredicted RBP6.93□□□□□ -1.3
CDK5RAP3-211ENST00000578996 QTRT1Q9BXR0 403 aaKnown RBP6.93□□□□□ -1.3
CDK5RAP3-211ENST00000578996 THYN1Q9P016 225 aa6.93□□□□□ -1.3
CDK5RAP3-211ENST00000578996 MLXQ9UH92 298 aa6.93□□□□□ -1.3
CDK5RAP3-211ENST00000578996 CSMD3Q7Z407 3707 aa6.93□□□□□ -1.3
CDK5RAP3-211ENST00000578996 LYSTQ99698 3801 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms