RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 NXPH3O95157 252 aa8.2□□□□□ -1.1
SS18-210ENST00000578700 CRYZL1O95825 349 aa8.2□□□□□ -1.1
SS18-210ENST00000578700 CEACAM3P40198 252 aa8.2□□□□□ -1.1
SS18-210ENST00000578700 RAB13P51153 203 aa8.2□□□□□ -1.1
SS18-210ENST00000578700 KRTAP10-3P60369 221 aa8.2□□□□□ -1.1
SS18-210ENST00000578700 RPP30P78346 268 aaKnown RBP8.2□□□□□ -1.1
SS18-210ENST00000578700 DMRTA1Q5VZB9 504 aa8.2□□□□□ -1.1
SS18-210ENST00000578700 BAP18Q8IXM2 172 aa8.2□□□□□ -1.1
SS18-210ENST00000578700 LY6G5BQ8NDX9 201 aa8.2□□□□□ -1.1
SS18-210ENST00000578700 STOML3Q8TAV4 291 aa8.2□□□□□ -1.1
SS18-210ENST00000578700 LRRC20Q8TCA0 184 aa8.2□□□□□ -1.1
SS18-210ENST00000578700 CITED1Q99966 193 aa8.2□□□□□ -1.1
SS18-210ENST00000578700 PCGF1Q9BSM1 259 aa8.2□□□□□ -1.1
SS18-210ENST00000578700 C1RLQ9NZP8 487 aa8.2□□□□□ -1.1
SS18-210ENST00000578700 RNF114Q9Y508 228 aa8.2□□□□□ -1.1
SS18-210ENST00000578700 WSB1Q9Y6I7 421 aa8.2□□□□□ -1.1
SS18-210ENST00000578700 IGHV2-26A0A0B4J1V2 119 aa8.19□□□□□ -1.1
SS18-210ENST00000578700 MSGN1A6NI15 193 aa8.19□□□□□ -1.1
SS18-210ENST00000578700 CEBPZOSA8MTT3 80 aa8.19□□□□□ -1.1
SS18-210ENST00000578700 PROP1O75360 226 aa8.19□□□□□ -1.1
SS18-210ENST00000578700 IFNA17P01571 189 aa8.19□□□□□ -1.1
SS18-210ENST00000578700 GAPDHP04406 335 aaKnown RBP8.19□□□□□ -1.1
SS18-210ENST00000578700 CT45A6P0DMU7 189 aa8.19□□□□□ -1.1
SS18-210ENST00000578700 CT45A5P0DMU8 189 aa8.19□□□□□ -1.1
SS18-210ENST00000578700 CT45A7P0DMV0 189 aa8.19□□□□□ -1.1
SS18-210ENST00000578700 UBE2KP61086 200 aa8.19□□□□□ -1.1
SS18-210ENST00000578700 HBG1P69891 147 aa8.19□□□□□ -1.1
SS18-210ENST00000578700 HBG2P69892 147 aa8.19□□□□□ -1.1
SS18-210ENST00000578700 RELBQ01201 579 aa8.19□□□□□ -1.1
SS18-210ENST00000578700 EWSR1Q01844 656 aaKnown RBP eCLIP8.19□□□□□ -1.1
SS18-210ENST00000578700 TNFRSF9Q07011 255 aa8.19□□□□□ -1.1
SS18-210ENST00000578700 ZNF266Q14584 549 aa8.19□□□□□ -1.1
SS18-210ENST00000578700 RUSC1-AS1Q66K80 236 aa8.19□□□□□ -1.1
SS18-210ENST00000578700 ALKAL2Q6UX46 152 aa8.19□□□□□ -1.1
SS18-210ENST00000578700 C1orf122Q6ZSJ8 110 aa8.19□□□□□ -1.1
SS18-210ENST00000578700 SSX9Q7RTT3 188 aa8.19□□□□□ -1.1
SS18-210ENST00000578700 ODF3L1Q8IXM7 274 aa8.19□□□□□ -1.1
SS18-210ENST00000578700 ZNF383Q8NA42 475 aa8.19□□□□□ -1.1
SS18-210ENST00000578700 BEND2Q8NDZ0 799 aa8.19□□□□□ -1.1
SS18-210ENST00000578700 OSR1Q8TAX0 266 aaPredicted RBP8.19□□□□□ -1.1
SS18-210ENST00000578700 DDB2Q92466 427 aa8.19□□□□□ -1.1
SS18-210ENST00000578700 LHX4Q969G2 390 aa8.19□□□□□ -1.1
SS18-210ENST00000578700 SMIM8Q96KF7 97 aa8.19□□□□□ -1.1
SS18-210ENST00000578700 RHOVQ96L33 236 aa8.19□□□□□ -1.1
SS18-210ENST00000578700 ZNF251Q9BRH9 671 aa8.19□□□□□ -1.1
SS18-210ENST00000578700 HIPK2Q9H2X6 1198 aa8.19□□□□□ -1.1
SS18-210ENST00000578700 ENY2Q9NPA8 101 aa8.19□□□□□ -1.1
SS18-210ENST00000578700 FKBP11Q9NYL4 201 aa8.19□□□□□ -1.1
SS18-210ENST00000578700 PSENENQ9NZ42 101 aa8.19□□□□□ -1.1
SS18-210ENST00000578700 HSPB7Q9UBY9 170 aa8.19□□□□□ -1.1
SS18-210ENST00000578700 FBXL17Q9UF56 701 aa8.19□□□□□ -1.1
SS18-210ENST00000578700 DNAH3Q8TD57 4116 aa8.19□□□□□ -1.1
SS18-210ENST00000578700 IGHV2-70DA0A0C4DH43 119 aa8.18□□□□□ -1.1
SS18-210ENST00000578700 FAM24AA6NFZ4 105 aa8.18□□□□□ -1.1
SS18-210ENST00000578700 A8MXK9 166 aa8.18□□□□□ -1.1
SS18-210ENST00000578700 SHOXO15266 292 aa8.18□□□□□ -1.1
SS18-210ENST00000578700 DFFBO76075 338 aa8.18□□□□□ -1.1
SS18-210ENST00000578700 TSPAN15O95858 294 aa8.18□□□□□ -1.1
SS18-210ENST00000578700 PRB2P02812 416 aaPredicted RBP8.18□□□□□ -1.1
SS18-210ENST00000578700 P0C879 139 aa8.18□□□□□ -1.1
SS18-210ENST00000578700 COX7A1P24310 79 aa8.18□□□□□ -1.1
SS18-210ENST00000578700 SULT1A1P50225 295 aa8.18□□□□□ -1.1
SS18-210ENST00000578700 ZNF137PP52743 207 aa8.18□□□□□ -1.1
SS18-210ENST00000578700 BRWD1-AS2P59051 145 aa8.18□□□□□ -1.1
SS18-210ENST00000578700 ARF6P62330 175 aa8.18□□□□□ -1.1
SS18-210ENST00000578700 IZUMO4Q1ZYL8 232 aa8.18□□□□□ -1.1
SS18-210ENST00000578700 HLA-DRB5Q30154 266 aa8.18□□□□□ -1.1
SS18-210ENST00000578700 CLLU1Q5K131 121 aa8.18□□□□□ -1.1
SS18-210ENST00000578700 SLC25A24Q6NUK1 477 aa8.18□□□□□ -1.1
SS18-210ENST00000578700 Q6YL49 198 aa8.18□□□□□ -1.1
SS18-210ENST00000578700 Q6ZRM9 215 aa8.18□□□□□ -1.1
SS18-210ENST00000578700 C9orf139Q6ZV77 190 aa8.18□□□□□ -1.1
SS18-210ENST00000578700 PDPNQ86YL7 162 aa8.18□□□□□ -1.1
SS18-210ENST00000578700 PDZD9Q8IXQ8 264 aa8.18□□□□□ -1.1
SS18-210ENST00000578700 OR4C13Q8NGP0 309 aa8.18□□□□□ -1.1
SS18-210ENST00000578700 OR1S2Q8NGQ3 325 aa8.18□□□□□ -1.1
SS18-210ENST00000578700 VSTM2AQ8TAG5 236 aa8.18□□□□□ -1.1
SS18-210ENST00000578700 FLYWCH2Q96CP2 140 aaKnown RBP8.18□□□□□ -1.1
SS18-210ENST00000578700 TSNAXQ99598 290 aaKnown RBP8.18□□□□□ -1.1
SS18-210ENST00000578700 MRPL20Q9BYC9 149 aaKnown RBP8.18□□□□□ -1.1
SS18-210ENST00000578700 SMIM3Q9BZL3 60 aa8.18□□□□□ -1.1
SS18-210ENST00000578700 SLC25A32Q9H2D1 315 aa8.18□□□□□ -1.1
SS18-210ENST00000578700 RBKSQ9H477 322 aa8.18□□□□□ -1.1
SS18-210ENST00000578700 TMEM140Q9NV12 185 aa8.18□□□□□ -1.1
SS18-210ENST00000578700 PRNDQ9UKY0 176 aa8.18□□□□□ -1.1
SS18-210ENST00000578700 WASHC3Q9Y3C0 194 aa8.18□□□□□ -1.1
SS18-210ENST00000578700 KPTNQ9Y664 436 aa8.18□□□□□ -1.1
SS18-210ENST00000578700 LEUTXA8MZ59 168 aa8.17□□□□□ -1.1
SS18-210ENST00000578700 C22orf46C9J442 243 aa8.17□□□□□ -1.1
SS18-210ENST00000578700 BUB1B-PAK6H3BSN5 160 aa8.17□□□□□ -1.1
SS18-210ENST00000578700 ATP6V1G1O75348 118 aa8.17□□□□□ -1.1
SS18-210ENST00000578700 NDUFA7O95182 113 aa8.17□□□□□ -1.1
SS18-210ENST00000578700 CFDP00746 253 aaPredicted RBP8.17□□□□□ -1.1
SS18-210ENST00000578700 IFNA5P01569 189 aa8.17□□□□□ -1.1
SS18-210ENST00000578700 IAPPP10997 89 aa8.17□□□□□ -1.1
SS18-210ENST00000578700 HTR1DP28221 377 aa8.17□□□□□ -1.1
SS18-210ENST00000578700 LINC00205P59089 165 aa8.17□□□□□ -1.1
SS18-210ENST00000578700 SPCS3P61009 180 aa8.17□□□□□ -1.1
SS18-210ENST00000578700 RPS16P62249 146 aaKnown RBP8.17□□□□□ -1.1
SS18-210ENST00000578700 FBLN7Q53RD9 439 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms