RNA–Protein interactions for RNA: ENST00000578681.5

DDX42-208, Transcript of DEAD-box helicase 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX42, Length 4,337 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-208ENST00000578681 RTL8BQ17RB0 113 aa13.86□□□□□ -0.19
DDX42-208ENST00000578681 SNRNP40Q96DI7 357 aaKnown RBP13.86□□□□□ -0.19
DDX42-208ENST00000578681 ACTR3CQ9C0K3 210 aaPredicted RBP13.86□□□□□ -0.19
DDX42-208ENST00000578681 COMMD5Q9GZQ3 224 aa13.86□□□□□ -0.19
DDX42-208ENST00000578681 SLC35D1Q9NTN3 355 aa13.86□□□□□ -0.19
DDX42-208ENST00000578681 SLC25A10Q9UBX3 287 aaPredicted RBP13.86□□□□□ -0.19
DDX42-208ENST00000578681 COX7A1P24310 79 aa13.85□□□□□ -0.19
DDX42-208ENST00000578681 TDGF1P3P51864 188 aa13.85□□□□□ -0.19
DDX42-208ENST00000578681 SUMO1P63165 101 aaKnown RBP13.85□□□□□ -0.19
DDX42-208ENST00000578681 QTRT1Q9BXR0 403 aaKnown RBP13.85□□□□□ -0.19
DDX42-208ENST00000578681 FAM215AQ9Y5M1 114 aa13.85□□□□□ -0.19
DDX42-208ENST00000578681 WDFY3Q8IZQ1 3526 aa13.85□□□□□ -0.19
DDX42-208ENST00000578681 ZNF737O75373 536 aa13.85□□□□□ -0.19
DDX42-208ENST00000578681 KITLGP21583 273 aa13.85□□□□□ -0.19
DDX42-208ENST00000578681 MST1LQ2TV78 715 aa13.85□□□□□ -0.19
DDX42-208ENST00000578681 LRRC10Q5BKY1 277 aa13.85□□□□□ -0.19
DDX42-208ENST00000578681 STUMQ69YW2 141 aa13.85□□□□□ -0.19
DDX42-208ENST00000578681 CFAP161Q6P656 301 aa13.85□□□□□ -0.19
DDX42-208ENST00000578681 DOLPP1Q86YN1 238 aa13.85□□□□□ -0.19
DDX42-208ENST00000578681 DPPA3Q6W0C5 159 aa13.85□□□□□ -0.19
DDX42-208ENST00000578681 ZBTB34Q8NCN2 500 aa13.85□□□□□ -0.19
DDX42-208ENST00000578681 ACY3Q96HD9 319 aa13.85□□□□□ -0.19
DDX42-208ENST00000578681 H3BQ15 152 aa13.84□□□□□ -0.19
DDX42-208ENST00000578681 GFRA3O60609 400 aa13.84□□□□□ -0.19
DDX42-208ENST00000578681 FOLR2P14207 255 aa13.84□□□□□ -0.19
DDX42-208ENST00000578681 SPRNQ5BIV9 151 aa13.84□□□□□ -0.19
DDX42-208ENST00000578681 TRAT1Q6PIZ9 186 aa13.84□□□□□ -0.19
DDX42-208ENST00000578681 DUX4L9Q6RFH8 374 aaPredicted RBP13.84□□□□□ -0.19
DDX42-208ENST00000578681 TMEM147Q9BVK8 224 aa13.84□□□□□ -0.19
DDX42-208ENST00000578681 CHD3Q12873 2000 aaKnown RBP13.84□□□□□ -0.19
DDX42-208ENST00000578681 TRAV38-1A0A0B4J264 116 aa13.84□□□□□ -0.19
DDX42-208ENST00000578681 MBD3L4A6NDZ8 208 aaPredicted RBP13.84□□□□□ -0.19
DDX42-208ENST00000578681 MBD3L3A6NE82 208 aaPredicted RBP13.84□□□□□ -0.19
DDX42-208ENST00000578681 MBD3L5A6NJ08 208 aaPredicted RBP13.84□□□□□ -0.19
DDX42-208ENST00000578681 TM4SF5O14894 197 aa13.84□□□□□ -0.19
DDX42-208ENST00000578681 SCGB2A2Q13296 93 aa13.84□□□□□ -0.19
DDX42-208ENST00000578681 TMEM183BQ1AE95 376 aa13.84□□□□□ -0.19
DDX42-208ENST00000578681 BAGE3Q86Y29 109 aa13.84□□□□□ -0.19
DDX42-208ENST00000578681 BAGE2Q86Y30 109 aa13.84□□□□□ -0.19
DDX42-208ENST00000578681 OR4S2Q8NH73 311 aa13.84□□□□□ -0.19
DDX42-208ENST00000578681 MBD3L2Q8NHZ7 208 aaPredicted RBP13.84□□□□□ -0.19
DDX42-208ENST00000578681 TNCP24821 2201 aa13.84□□□□□ -0.19
DDX42-208ENST00000578681 ZNF880Q6PDB4 577 aa13.84□□□□□ -0.19
DDX42-208ENST00000578681 LSM10Q969L4 123 aaKnown RBP13.84□□□□□ -0.19
DDX42-208ENST00000578681 VSIRQ9H7M9 311 aa13.84□□□□□ -0.19
DDX42-208ENST00000578681 HIST1H2BKO60814 126 aa13.83□□□□□ -0.19
DDX42-208ENST00000578681 HIST1H2BJP06899 126 aa13.83□□□□□ -0.19
DDX42-208ENST00000578681 LYL1P12980 280 aa13.83□□□□□ -0.19
DDX42-208ENST00000578681 HIST1H2BOP23527 126 aa13.83□□□□□ -0.19
DDX42-208ENST00000578681 HIST1H2BBP33778 126 aa13.83□□□□□ -0.19
DDX42-208ENST00000578681 HIST1H2BDP58876 126 aa13.83□□□□□ -0.19
DDX42-208ENST00000578681 HIST1H2BCP62807 126 aa13.83□□□□□ -0.19
DDX42-208ENST00000578681 HIST2H2BEQ16778 126 aa13.83□□□□□ -0.19
DDX42-208ENST00000578681 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.83□□□□□ -0.19
DDX42-208ENST00000578681 VN1R17PQ8TDU5 208 aa13.83□□□□□ -0.19
DDX42-208ENST00000578681 TAF15Q92804 592 aaKnown RBP eCLIP13.83□□□□□ -0.19
DDX42-208ENST00000578681 HIST1H2BHQ93079 126 aa13.83□□□□□ -0.19
DDX42-208ENST00000578681 HIST1H2BNQ99877 126 aa13.83□□□□□ -0.19
DDX42-208ENST00000578681 HIST1H2BMQ99879 126 aa13.83□□□□□ -0.19
DDX42-208ENST00000578681 ITGB1BP1O14713 200 aa13.83□□□□□ -0.2
DDX42-208ENST00000578681 RCC1LQ96I51 464 aaKnown RBP13.83□□□□□ -0.2
DDX42-208ENST00000578681 CLEC5AQ9NY25 188 aa13.83□□□□□ -0.2
DDX42-208ENST00000578681 PPIAL4EA0A075B759 164 aa13.83□□□□□ -0.2
DDX42-208ENST00000578681 PPIAL4DF5H284 164 aa13.83□□□□□ -0.2
DDX42-208ENST00000578681 LYNX1G3V0Z9 82 aa13.83□□□□□ -0.2
DDX42-208ENST00000578681 CD3EP07766 207 aa13.83□□□□□ -0.2
DDX42-208ENST00000578681 PPIAL4FP0DN26 164 aa13.83□□□□□ -0.2
DDX42-208ENST00000578681 LYNX1P0DP58 116 aa13.83□□□□□ -0.2
DDX42-208ENST00000578681 ZNF585BQ52M93 769 aa13.83□□□□□ -0.2
DDX42-208ENST00000578681 BET1LQ9NYM9 111 aa13.83□□□□□ -0.2
DDX42-208ENST00000578681 PPIAL4AQ9Y536 164 aa13.83□□□□□ -0.2
DDX42-208ENST00000578681 ACACBO00763 2458 aa13.83□□□□□ -0.2
DDX42-208ENST00000578681 KIAA1549Q9HCM3 1950 aa13.83□□□□□ -0.2
DDX42-208ENST00000578681 IGKV1D-17A0A075B6S4 117 aa13.83□□□□□ -0.2
DDX42-208ENST00000578681 TMEM238C9JI98 176 aa13.83□□□□□ -0.2
DDX42-208ENST00000578681 IFNL4K9M1U5 179 aa13.83□□□□□ -0.2
DDX42-208ENST00000578681 GNG7O60262 68 aa13.83□□□□□ -0.2
DDX42-208ENST00000578681 IGHV3-48P01763 117 aa13.83□□□□□ -0.2
DDX42-208ENST00000578681 CCL3L1P16619 93 aa13.83□□□□□ -0.2
DDX42-208ENST00000578681 COMPP49747 757 aaPredicted RBP13.83□□□□□ -0.2
DDX42-208ENST00000578681 DLK1P80370 383 aa13.83□□□□□ -0.2
DDX42-208ENST00000578681 TVP23CQ96ET8 276 aa13.83□□□□□ -0.2
DDX42-208ENST00000578681 A0A0G2JNJ9 132 aa13.82□□□□□ -0.2
DDX42-208ENST00000578681 LINC00473A8K010 186 aa13.82□□□□□ -0.2
DDX42-208ENST00000578681 TOX4O94842 621 aa13.82□□□□□ -0.2
DDX42-208ENST00000578681 ZNF586Q9NXT0 402 aa13.82□□□□□ -0.2
DDX42-208ENST00000578681 ZNRD1Q9P1U0 126 aa13.82□□□□□ -0.2
DDX42-208ENST00000578681 Q9UFV3 132 aa13.82□□□□□ -0.2
DDX42-208ENST00000578681 SELENOKQ9Y6D0 94 aa13.82□□□□□ -0.2
DDX42-208ENST00000578681 M0QZ24 198 aa13.82□□□□□ -0.2
DDX42-208ENST00000578681 ERVK11-1P61568 191 aa13.82□□□□□ -0.2
DDX42-208ENST00000578681 ACOT6Q3I5F7 207 aaPredicted RBP13.82□□□□□ -0.2
DDX42-208ENST00000578681 OR4A47Q6IF82 309 aa13.82□□□□□ -0.2
DDX42-208ENST00000578681 TMEM140Q9NV12 185 aa13.82□□□□□ -0.2
DDX42-208ENST00000578681 RAXQ9Y2V3 346 aa13.82□□□□□ -0.2
DDX42-208ENST00000578681 MT-CO2P00403 227 aa13.82□□□□□ -0.2
DDX42-208ENST00000578681 IGKV1-39P01597 117 aa13.82□□□□□ -0.2
DDX42-208ENST00000578681 IGKV1D-39P04432 117 aa13.82□□□□□ -0.2
DDX42-208ENST00000578681 SRRM5B3KS81 715 aa13.81□□□□□ -0.2
DDX42-208ENST00000578681 IGHV1-46P01743 117 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms