RNA–Protein interactions for RNA: ENST00000578469.1

SREBF1-218, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-218ENST00000578469 LEUTXA8MZ59 168 aa13.72□□□□□ -0.21
SREBF1-218ENST00000578469 IGKV1-16P04430 117 aa13.72□□□□□ -0.21
SREBF1-218ENST00000578469 ARG1P05089 322 aa13.72□□□□□ -0.21
SREBF1-218ENST00000578469 FGF2P09038 288 aa13.72□□□□□ -0.21
SREBF1-218ENST00000578469 SEC11BP0C7V7 166 aa13.72□□□□□ -0.21
SREBF1-218ENST00000578469 HTR1DP28221 377 aa13.72□□□□□ -0.21
SREBF1-218ENST00000578469 HSPE1P61604 102 aaKnown RBP13.72□□□□□ -0.21
SREBF1-218ENST00000578469 LMO4P61968 165 aa13.72□□□□□ -0.21
SREBF1-218ENST00000578469 DIAPH2-AS1Q14236 149 aa13.72□□□□□ -0.21
SREBF1-218ENST00000578469 SLC25A24Q6NUK1 477 aa13.72□□□□□ -0.21
SREBF1-218ENST00000578469 TMEM14EPQ6UXP3 125 aa13.72□□□□□ -0.21
SREBF1-218ENST00000578469 COMMD7Q86VX2 200 aa13.72□□□□□ -0.21
SREBF1-218ENST00000578469 OR4P4Q8NGL7 312 aa13.72□□□□□ -0.21
SREBF1-218ENST00000578469 OR4A5Q8NH83 315 aa13.72□□□□□ -0.21
SREBF1-218ENST00000578469 MS4A7Q9GZW8 240 aaPredicted RBP13.72□□□□□ -0.21
SREBF1-218ENST00000578469 HEYLQ9NQ87 328 aaPredicted RBP13.72□□□□□ -0.21
SREBF1-218ENST00000578469 TRAV3A0A0B4J244 114 aa13.71□□□□□ -0.21
SREBF1-218ENST00000578469 IGHV2-70DA0A0C4DH43 119 aa13.71□□□□□ -0.21
SREBF1-218ENST00000578469 FGF16O43320 207 aa13.71□□□□□ -0.21
SREBF1-218ENST00000578469 FBXO24O75426 580 aa13.71□□□□□ -0.21
SREBF1-218ENST00000578469 KBTBD11O94819 623 aa13.71□□□□□ -0.21
SREBF1-218ENST00000578469 IL6RP08887 468 aaPredicted RBP13.71□□□□□ -0.21
SREBF1-218ENST00000578469 ZFP36P26651 326 aaKnown RBP13.71□□□□□ -0.21
SREBF1-218ENST00000578469 LGALS7P47929 136 aa13.71□□□□□ -0.21
SREBF1-218ENST00000578469 DSCR9P59020 149 aa13.71□□□□□ -0.21
SREBF1-218ENST00000578469 LCN2P80188 198 aa13.71□□□□□ -0.21
SREBF1-218ENST00000578469 ATP6V1FQ16864 119 aa13.71□□□□□ -0.21
SREBF1-218ENST00000578469 VMA21Q3ZAQ7 101 aa13.71□□□□□ -0.21
SREBF1-218ENST00000578469 MOB3BQ86TA1 216 aa13.71□□□□□ -0.21
SREBF1-218ENST00000578469 LILRB2Q8N423 598 aa13.71□□□□□ -0.21
SREBF1-218ENST00000578469 C10orf105Q8TEF2 133 aa13.71□□□□□ -0.21
SREBF1-218ENST00000578469 ZDHHC16Q969W1 377 aa13.71□□□□□ -0.21
SREBF1-218ENST00000578469 GNPNAT1Q96EK6 184 aaPredicted RBP13.71□□□□□ -0.21
SREBF1-218ENST00000578469 SIRT7Q9NRC8 400 aa13.71□□□□□ -0.21
SREBF1-218ENST00000578469 TMEM14BQ9NUH8 114 aa13.71□□□□□ -0.21
SREBF1-218ENST00000578469 DPM3Q9P2X0 92 aa13.71□□□□□ -0.21
SREBF1-218ENST00000578469 TCF19Q9Y242 345 aa13.71□□□□□ -0.21
SREBF1-218ENST00000578469 ZNF257Q9Y2Q1 563 aa13.71□□□□□ -0.21
SREBF1-218ENST00000578469 OR51B2Q9Y5P1 312 aa13.71□□□□□ -0.21
SREBF1-218ENST00000578469 AUP1Q9Y679 476 aa13.71□□□□□ -0.21
SREBF1-218ENST00000578469 ZANQ9Y493 2812 aa13.7□□□□□ -0.22
SREBF1-218ENST00000578469 IGHV1-3A0A0C4DH29 117 aa13.7□□□□□ -0.22
SREBF1-218ENST00000578469 INAFM1C9JVW0 142 aa13.7□□□□□ -0.22
SREBF1-218ENST00000578469 SAA1P0DJI8 122 aaPredicted RBP13.7□□□□□ -0.22
SREBF1-218ENST00000578469 USF1P22415 310 aaPredicted RBP13.7□□□□□ -0.22
SREBF1-218ENST00000578469 HOXA1P49639 335 aaPredicted RBP13.7□□□□□ -0.22
SREBF1-218ENST00000578469 SULT1A2P50226 295 aa13.7□□□□□ -0.22
SREBF1-218ENST00000578469 DLX1P56177 255 aa13.7□□□□□ -0.22
SREBF1-218ENST00000578469 SPINK9Q5DT21 86 aa13.7□□□□□ -0.22
SREBF1-218ENST00000578469 TPTE2P1Q5T6R2 138 aa13.7□□□□□ -0.22
SREBF1-218ENST00000578469 PUSL1Q8N0Z8 303 aaKnown RBP13.7□□□□□ -0.22
SREBF1-218ENST00000578469 CIARTQ8N365 385 aaPredicted RBP13.7□□□□□ -0.22
SREBF1-218ENST00000578469 HSD17B11Q8NBQ5 300 aa13.7□□□□□ -0.22
SREBF1-218ENST00000578469 OR10P1Q8NGE3 313 aa13.7□□□□□ -0.22
SREBF1-218ENST00000578469 SCGB1C1Q8TD33 95 aa13.7□□□□□ -0.22
SREBF1-218ENST00000578469 SAT2Q96F10 170 aaPredicted RBP13.7□□□□□ -0.22
SREBF1-218ENST00000578469 PERPQ96FX8 193 aa13.7□□□□□ -0.22
SREBF1-218ENST00000578469 CXorf58Q96LI9 332 aa13.7□□□□□ -0.22
SREBF1-218ENST00000578469 CITED4Q96RK1 184 aa13.7□□□□□ -0.22
SREBF1-218ENST00000578469 UNKLQ9H9P5 680 aaKnown RBP13.7□□□□□ -0.22
SREBF1-218ENST00000578469 SRRM4A7MD48 611 aaKnown RBP13.69□□□□□ -0.22
SREBF1-218ENST00000578469 ZNF705EA8MWA4 302 aaPredicted RBP13.69□□□□□ -0.22
SREBF1-218ENST00000578469 LY6LH3BQJ8 138 aa13.69□□□□□ -0.22
SREBF1-218ENST00000578469 SPP1P10451 314 aa13.69□□□□□ -0.22
SREBF1-218ENST00000578469 PAX1P15863 534 aa13.69□□□□□ -0.22
SREBF1-218ENST00000578469 RAB5CP51148 216 aa13.69□□□□□ -0.22
SREBF1-218ENST00000578469 BLOC1S1P78537 153 aa13.69□□□□□ -0.22
SREBF1-218ENST00000578469 PRB3Q04118 309 aaPredicted RBP13.69□□□□□ -0.22
SREBF1-218ENST00000578469 SLC38A11Q08AI6 406 aa13.69□□□□□ -0.22
SREBF1-218ENST00000578469 VMO1Q7Z5L0 202 aa13.69□□□□□ -0.22
SREBF1-218ENST00000578469 TMEM167AQ8TBQ9 72 aa13.69□□□□□ -0.22
SREBF1-218ENST00000578469 PINX1Q96BK5 328 aaKnown RBP13.69□□□□□ -0.22
SREBF1-218ENST00000578469 OR4C12Q96R67 309 aa13.69□□□□□ -0.22
SREBF1-218ENST00000578469 IFNA10P01566 189 aa13.68□□□□□ -0.22
SREBF1-218ENST00000578469 OR8U8P0C7N1 319 aa13.68□□□□□ -0.22
SREBF1-218ENST00000578469 FAM157CP0CG43 387 aa13.68□□□□□ -0.22
SREBF1-218ENST00000578469 VDAC2P45880 294 aaPredicted RBP13.68□□□□□ -0.22
SREBF1-218ENST00000578469 RAB11AP62491 216 aa13.68□□□□□ -0.22
SREBF1-218ENST00000578469 PAX2Q02962 417 aa13.68□□□□□ -0.22
SREBF1-218ENST00000578469 OR8G2PQ6IF36 304 aa13.68□□□□□ -0.22
SREBF1-218ENST00000578469 OR5B3Q8NH48 314 aa13.68□□□□□ -0.22
SREBF1-218ENST00000578469 RNF5Q99942 180 aa13.68□□□□□ -0.22
SREBF1-218ENST00000578469 SIRPDQ9H106 197 aa13.68□□□□□ -0.22
SREBF1-218ENST00000578469 ODF3BA8MYP8 253 aa13.67□□□□□ -0.22
SREBF1-218ENST00000578469 VWC2LB2RUY7 222 aa13.67□□□□□ -0.22
SREBF1-218ENST00000578469 TOX4O94842 621 aa13.67□□□□□ -0.22
SREBF1-218ENST00000578469 ATP6V0CP27449 155 aa13.67□□□□□ -0.22
SREBF1-218ENST00000578469 DVL1P1P54792 670 aaPredicted RBP13.67□□□□□ -0.22
SREBF1-218ENST00000578469 LGALS4P56470 323 aa13.67□□□□□ -0.22
SREBF1-218ENST00000578469 RPL8P62917 257 aaKnown RBP13.67□□□□□ -0.22
SREBF1-218ENST00000578469 PRCDQ00LT1 54 aa13.67□□□□□ -0.22
SREBF1-218ENST00000578469 ARL16Q0P5N6 197 aa13.67□□□□□ -0.22
SREBF1-218ENST00000578469 MINOS1Q5TGZ0 78 aa13.67□□□□□ -0.22
SREBF1-218ENST00000578469 HAPLN4Q86UW8 402 aa13.67□□□□□ -0.22
SREBF1-218ENST00000578469 TMEM147Q9BVK8 224 aa13.67□□□□□ -0.22
SREBF1-218ENST00000578469 HINT2Q9BX68 163 aa13.67□□□□□ -0.22
SREBF1-218ENST00000578469 PARD6GQ9BYG4 376 aaPredicted RBP13.67□□□□□ -0.22
SREBF1-218ENST00000578469 COMMD5Q9GZQ3 224 aa13.67□□□□□ -0.22
SREBF1-218ENST00000578469 PLEKHA3Q9HB20 300 aa13.67□□□□□ -0.22
SREBF1-218ENST00000578469 POLR3KQ9Y2Y1 108 aaPredicted RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms