RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 TMEM86BQ8N661 226 aa6.39□□□□□ -1.39
COPS3-215ENST00000578317 UXS1Q8NBZ7 420 aa6.39□□□□□ -1.39
COPS3-215ENST00000578317 SSMEM1Q8WWF3 244 aa6.39□□□□□ -1.39
COPS3-215ENST00000578317 HARBI1Q96MB7 349 aa6.39□□□□□ -1.39
COPS3-215ENST00000578317 ZNF48Q96MX3 618 aaPredicted RBP6.39□□□□□ -1.39
COPS3-215ENST00000578317 OR2A7Q96R45 310 aa6.39□□□□□ -1.39
COPS3-215ENST00000578317 C1RLQ9NZP8 487 aa6.39□□□□□ -1.39
COPS3-215ENST00000578317 TEP1Q99973 2627 aaKnown RBP6.38□□□□□ -1.39
COPS3-215ENST00000578317 A6NDX4 124 aa6.38□□□□□ -1.39
COPS3-215ENST00000578317 ZNF785A8K8V0 405 aa6.38□□□□□ -1.39
COPS3-215ENST00000578317 B5MCH6 92 aa6.38□□□□□ -1.39
COPS3-215ENST00000578317 PITX3O75364 302 aa6.38□□□□□ -1.39
COPS3-215ENST00000578317 ADAP1O75689 374 aa6.38□□□□□ -1.39
COPS3-215ENST00000578317 HOXB5P09067 269 aa6.38□□□□□ -1.39
COPS3-215ENST00000578317 G6PCP35575 357 aa6.38□□□□□ -1.39
COPS3-215ENST00000578317 BCAP31P51572 246 aa6.38□□□□□ -1.39
COPS3-215ENST00000578317 CYCSP99999 105 aaKnown RBP6.38□□□□□ -1.39
COPS3-215ENST00000578317 IL15RAQ13261 267 aa6.38□□□□□ -1.39
COPS3-215ENST00000578317 PSG5Q15238 335 aa6.38□□□□□ -1.39
COPS3-215ENST00000578317 FCN2Q15485 313 aa6.38□□□□□ -1.39
COPS3-215ENST00000578317 C2orf68Q2NKX9 166 aa6.38□□□□□ -1.39
COPS3-215ENST00000578317 VMA21Q3ZAQ7 101 aa6.38□□□□□ -1.39
COPS3-215ENST00000578317 GGNBP1Q5YKI7 109 aa6.38□□□□□ -1.39
COPS3-215ENST00000578317 OR4A47Q6IF82 309 aa6.38□□□□□ -1.39
COPS3-215ENST00000578317 Q6ZRM9 215 aa6.38□□□□□ -1.39
COPS3-215ENST00000578317 H2BFWTQ7Z2G1 175 aa6.38□□□□□ -1.39
COPS3-215ENST00000578317 C16orf82Q7Z2V1 217 aa6.38□□□□□ -1.39
COPS3-215ENST00000578317 OR11H7Q8NGC8 314 aa6.38□□□□□ -1.39
COPS3-215ENST00000578317 OR5M8Q8NGP6 311 aa6.38□□□□□ -1.39
COPS3-215ENST00000578317 TMEM167AQ8TBQ9 72 aa6.38□□□□□ -1.39
COPS3-215ENST00000578317 C22orf15Q8WYQ4 148 aa6.38□□□□□ -1.39
COPS3-215ENST00000578317 GPR146Q96CH1 333 aa6.38□□□□□ -1.39
COPS3-215ENST00000578317 RBM14Q96PK6 669 aaKnown RBP6.38□□□□□ -1.39
COPS3-215ENST00000578317 SPIN2AQ99865 258 aa6.38□□□□□ -1.39
COPS3-215ENST00000578317 SPIN2BQ9BPZ2 258 aa6.38□□□□□ -1.39
COPS3-215ENST00000578317 TCF19Q9Y242 345 aa6.38□□□□□ -1.39
COPS3-215ENST00000578317 SIGLEC9Q9Y336 463 aa6.38□□□□□ -1.39
COPS3-215ENST00000578317 POMT1Q9Y6A1 747 aa6.38□□□□□ -1.39
COPS3-215ENST00000578317 CUBNO60494 3623 aa6.38□□□□□ -1.39
COPS3-215ENST00000578317 NSD1Q96L73 2696 aaPredicted RBP6.38□□□□□ -1.39
COPS3-215ENST00000578317 NIPBLQ6KC79 2804 aaeCLIP6.37□□□□□ -1.39
COPS3-215ENST00000578317 A0A0G2JRQ6 117 aa6.37□□□□□ -1.39
COPS3-215ENST00000578317 M0QZK8 103 aa6.37□□□□□ -1.39
COPS3-215ENST00000578317 UPK2O00526 184 aa6.37□□□□□ -1.39
COPS3-215ENST00000578317 RRHO14718 337 aa6.37□□□□□ -1.39
COPS3-215ENST00000578317 NBR2O15453 112 aa6.37□□□□□ -1.39
COPS3-215ENST00000578317 FGF16O43320 207 aa6.37□□□□□ -1.39
COPS3-215ENST00000578317 OR2F2O95006 317 aa6.37□□□□□ -1.39
COPS3-215ENST00000578317 SAA1P0DJI8 122 aaPredicted RBP6.37□□□□□ -1.39
COPS3-215ENST00000578317 TMEM11P17152 192 aa6.37□□□□□ -1.39
COPS3-215ENST00000578317 SRD5A1P18405 259 aa6.37□□□□□ -1.39
COPS3-215ENST00000578317 CXCL3P19876 107 aa6.37□□□□□ -1.39
COPS3-215ENST00000578317 CD24P25063 80 aa6.37□□□□□ -1.39
COPS3-215ENST00000578317 AKR1C2P52895 323 aa6.37□□□□□ -1.39
COPS3-215ENST00000578317 F2RL1P55085 397 aa6.37□□□□□ -1.39
COPS3-215ENST00000578317 HES1Q14469 280 aa6.37□□□□□ -1.39
COPS3-215ENST00000578317 HNF4GQ14541 408 aa6.37□□□□□ -1.39
COPS3-215ENST00000578317 C5orf64Q2M2E5 130 aa6.37□□□□□ -1.39
COPS3-215ENST00000578317 PDLIM3Q53GG5 364 aaPredicted RBP6.37□□□□□ -1.39
COPS3-215ENST00000578317 GSG1LQ6UXU4 331 aa6.37□□□□□ -1.39
COPS3-215ENST00000578317 ZNF429Q86V71 674 aa6.37□□□□□ -1.39
COPS3-215ENST00000578317 PPP1R27Q86WC6 154 aa6.37□□□□□ -1.39
COPS3-215ENST00000578317 FOXRED2Q8IWF2 684 aa6.37□□□□□ -1.39
COPS3-215ENST00000578317 VKORC1L1Q8N0U8 176 aa6.37□□□□□ -1.39
COPS3-215ENST00000578317 FAM71E2Q8N5Q1 922 aa6.37□□□□□ -1.39
COPS3-215ENST00000578317 DMBX1Q8NFW5 382 aa6.37□□□□□ -1.39
COPS3-215ENST00000578317 C2orf50Q96LR7 162 aa6.37□□□□□ -1.39
COPS3-215ENST00000578317 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.37□□□□□ -1.39
COPS3-215ENST00000578317 FKBP11Q9NYL4 201 aa6.37□□□□□ -1.39
COPS3-215ENST00000578317 FAM30AQ9NZY2 134 aa6.37□□□□□ -1.39
COPS3-215ENST00000578317 MPTX1A8MV57 137 aa6.36□□□□□ -1.39
COPS3-215ENST00000578317 FAM90A26D6RGX4 464 aa6.36□□□□□ -1.39
COPS3-215ENST00000578317 H3BUX3 64 aa6.36□□□□□ -1.39
COPS3-215ENST00000578317 CLDN34H7C241 214 aa6.36□□□□□ -1.39
COPS3-215ENST00000578317 SLC25A17O43808 307 aa6.36□□□□□ -1.39
COPS3-215ENST00000578317 SNAPC5O75971 98 aa6.36□□□□□ -1.39
COPS3-215ENST00000578317 KBTBD11O94819 623 aa6.36□□□□□ -1.39
COPS3-215ENST00000578317 MAS1LP35410 378 aa6.36□□□□□ -1.39
COPS3-215ENST00000578317 H2BFSP57053 126 aa6.36□□□□□ -1.39
COPS3-215ENST00000578317 RAP2BP61225 183 aa6.36□□□□□ -1.39
COPS3-215ENST00000578317 SMCO1Q147U7 214 aa6.36□□□□□ -1.39
COPS3-215ENST00000578317 MMDQ15546 238 aa6.36□□□□□ -1.39
COPS3-215ENST00000578317 MRGPRG-AS1Q2M3A8 158 aa6.36□□□□□ -1.39
COPS3-215ENST00000578317 IAH1Q2TAA2 248 aaPredicted RBP6.36□□□□□ -1.39
COPS3-215ENST00000578317 ZNF562Q6V9R5 426 aa6.36□□□□□ -1.39
COPS3-215ENST00000578317 RBMS3Q6XE24 437 aaKnown RBP6.36□□□□□ -1.39
COPS3-215ENST00000578317 IL17RELQ6ZVW7 336 aa6.36□□□□□ -1.39
COPS3-215ENST00000578317 MMD2Q8IY49 270 aa6.36□□□□□ -1.39
COPS3-215ENST00000578317 OR52E5Q8NH55 327 aa6.36□□□□□ -1.39
COPS3-215ENST00000578317 OR10C1Q96KK4 312 aa6.36□□□□□ -1.39
COPS3-215ENST00000578317 NMES1Q9C002 83 aa6.36□□□□□ -1.39
COPS3-215ENST00000578317 TMEM14BQ9NUH8 114 aa6.36□□□□□ -1.39
COPS3-215ENST00000578317 KIAA1456Q9P272 454 aa6.36□□□□□ -1.39
COPS3-215ENST00000578317 MGAT4CQ9UBM8 478 aa6.36□□□□□ -1.39
COPS3-215ENST00000578317 PRNDQ9UKY0 176 aa6.36□□□□□ -1.39
COPS3-215ENST00000578317 SLC45A2Q9UMX9 530 aa6.36□□□□□ -1.39
COPS3-215ENST00000578317 FOXA2Q9Y261 457 aaPredicted RBP6.36□□□□□ -1.39
COPS3-215ENST00000578317 ZNF257Q9Y2Q1 563 aa6.36□□□□□ -1.39
COPS3-215ENST00000578317 C13orf42A0A1B0GVH6 325 aa6.36□□□□□ -1.39
COPS3-215ENST00000578317 MDFIC2A0A1B0GVS7 189 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms