RNA–Protein interactions for RNA: ENST00000578187.1

CCDC57-211, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-211ENST00000578187 MRGPRFQ96AM1 343 aa9.9□□□□□ -0.82
CCDC57-211ENST00000578187 SLA2Q9H6Q3 261 aa9.9□□□□□ -0.82
CCDC57-211ENST00000578187 GNB4Q9HAV0 340 aa9.9□□□□□ -0.82
CCDC57-211ENST00000578187 VSIG4Q9Y279 399 aa9.9□□□□□ -0.82
CCDC57-211ENST00000578187 NOTCH3Q9UM47 2321 aa9.89□□□□□ -0.83
CCDC57-211ENST00000578187 MSGN1A6NI15 193 aa9.89□□□□□ -0.83
CCDC57-211ENST00000578187 I3L521 148 aa9.89□□□□□ -0.83
CCDC57-211ENST00000578187 NHLRC4P0CG21 123 aaPredicted RBP9.89□□□□□ -0.83
CCDC57-211ENST00000578187 PGAM2P15259 253 aa9.89□□□□□ -0.83
CCDC57-211ENST00000578187 ECI1P42126 302 aa9.89□□□□□ -0.83
CCDC57-211ENST00000578187 RPL8P62917 257 aaKnown RBP9.89□□□□□ -0.83
CCDC57-211ENST00000578187 FHL3Q13643 280 aa9.89□□□□□ -0.83
CCDC57-211ENST00000578187 C11orf87Q6NUJ2 197 aa9.89□□□□□ -0.83
CCDC57-211ENST00000578187 CADM3Q8N126 398 aa9.89□□□□□ -0.83
CCDC57-211ENST00000578187 OR11H1Q8NG94 326 aa9.89□□□□□ -0.83
CCDC57-211ENST00000578187 OR6Q1Q8NGQ2 317 aa9.89□□□□□ -0.83
CCDC57-211ENST00000578187 CASTOR1Q8WTX7 329 aa9.89□□□□□ -0.83
CCDC57-211ENST00000578187 WWC2-AS2Q96NR7 200 aa9.89□□□□□ -0.83
CCDC57-211ENST00000578187 PHB2Q99623 299 aa9.89□□□□□ -0.83
CCDC57-211ENST00000578187 SPIN2AQ99865 258 aa9.89□□□□□ -0.83
CCDC57-211ENST00000578187 SPIN2BQ9BPZ2 258 aa9.89□□□□□ -0.83
CCDC57-211ENST00000578187 TMEM140Q9NV12 185 aa9.89□□□□□ -0.83
CCDC57-211ENST00000578187 SLC2A8Q9NY64 477 aa9.89□□□□□ -0.83
CCDC57-211ENST00000578187 A0A1B0GW64 132 aa9.88□□□□□ -0.83
CCDC57-211ENST00000578187 MARCH11A6NNE9 402 aa9.88□□□□□ -0.83
CCDC57-211ENST00000578187 DISC1C4P0D8 188 aa9.88□□□□□ -0.83
CCDC57-211ENST00000578187 TEX22C9J3V5 150 aa9.88□□□□□ -0.83
CCDC57-211ENST00000578187 UPK2O00526 184 aa9.88□□□□□ -0.83
CCDC57-211ENST00000578187 OR9G9P0C7N8 305 aa9.88□□□□□ -0.83
CCDC57-211ENST00000578187 HLA-GP17693 338 aa9.88□□□□□ -0.83
CCDC57-211ENST00000578187 PI3P19957 117 aa9.88□□□□□ -0.83
CCDC57-211ENST00000578187 CD40LGP29965 261 aa9.88□□□□□ -0.83
CCDC57-211ENST00000578187 LPAR6P43657 344 aa9.88□□□□□ -0.83
CCDC57-211ENST00000578187 RPL27AP46776 148 aaKnown RBP9.88□□□□□ -0.83
CCDC57-211ENST00000578187 INSL3P51460 131 aa9.88□□□□□ -0.83
CCDC57-211ENST00000578187 PIGPP57054 158 aa9.88□□□□□ -0.83
CCDC57-211ENST00000578187 TPPP2P59282 170 aa9.88□□□□□ -0.83
CCDC57-211ENST00000578187 ERVK-16P61578 105 aa9.88□□□□□ -0.83
CCDC57-211ENST00000578187 SURF2Q15527 256 aaPredicted RBP9.88□□□□□ -0.83
CCDC57-211ENST00000578187 SCGB2B2Q4G0G5 96 aa9.88□□□□□ -0.83
CCDC57-211ENST00000578187 ADAD2Q8NCV1 583 aaKnown RBP9.88□□□□□ -0.83
CCDC57-211ENST00000578187 DMBX1Q8NFW5 382 aa9.88□□□□□ -0.83
CCDC57-211ENST00000578187 OR5T1Q8NG75 326 aa9.88□□□□□ -0.83
CCDC57-211ENST00000578187 OR13C8Q8NGS7 320 aa9.88□□□□□ -0.83
CCDC57-211ENST00000578187 ZFAND1Q8TCF1 268 aa9.88□□□□□ -0.83
CCDC57-211ENST00000578187 MARCH1Q8TCQ1 289 aa9.88□□□□□ -0.83
CCDC57-211ENST00000578187 PRRT1Q99946 306 aa9.88□□□□□ -0.83
CCDC57-211ENST00000578187 THAP7Q9BT49 309 aaPredicted RBP9.88□□□□□ -0.83
CCDC57-211ENST00000578187 HRASLSQ9HDD0 168 aa9.88□□□□□ -0.83
CCDC57-211ENST00000578187 DNAH3Q8TD57 4116 aa9.88□□□□□ -0.83
CCDC57-211ENST00000578187 E7EUB6 86 aa9.87□□□□□ -0.83
CCDC57-211ENST00000578187 H0Y980 276 aa9.87□□□□□ -0.83
CCDC57-211ENST00000578187 MPPED1O15442 326 aa9.87□□□□□ -0.83
CCDC57-211ENST00000578187 TRGV3P03979 118 aa9.87□□□□□ -0.83
CCDC57-211ENST00000578187 CTSDP07339 412 aaPredicted RBP9.87□□□□□ -0.83
CCDC57-211ENST00000578187 LGALS1P09382 135 aaKnown RBP9.87□□□□□ -0.83
CCDC57-211ENST00000578187 APELAP0DMC3 54 aa9.87□□□□□ -0.83
CCDC57-211ENST00000578187 ZNF616Q08AN1 781 aa9.87□□□□□ -0.83
CCDC57-211ENST00000578187 KLF9Q13886 244 aaPredicted RBP9.87□□□□□ -0.83
CCDC57-211ENST00000578187 PYDC2Q56P42 97 aa9.87□□□□□ -0.83
CCDC57-211ENST00000578187 SPANXN2Q5MJ10 180 aa9.87□□□□□ -0.83
CCDC57-211ENST00000578187 Q8N402 240 aa9.87□□□□□ -0.83
CCDC57-211ENST00000578187 CCDC71LQ8N9Z2 235 aa9.87□□□□□ -0.83
CCDC57-211ENST00000578187 OR1N2Q8NGR9 330 aa9.87□□□□□ -0.83
CCDC57-211ENST00000578187 MS4A10Q96PG2 267 aa9.87□□□□□ -0.83
CCDC57-211ENST00000578187 SRRQ9GZT4 340 aa9.87□□□□□ -0.83
CCDC57-211ENST00000578187 TRAV3A0A0B4J244 114 aa9.86□□□□□ -0.83
CCDC57-211ENST00000578187 CGB1A6NKQ9 187 aa9.86□□□□□ -0.83
CCDC57-211ENST00000578187 LY86O95711 162 aa9.86□□□□□ -0.83
CCDC57-211ENST00000578187 KRASP01116 189 aa9.86□□□□□ -0.83
CCDC57-211ENST00000578187 IGKV1-39P01597 117 aa9.86□□□□□ -0.83
CCDC57-211ENST00000578187 IGKV1D-39P04432 117 aa9.86□□□□□ -0.83
CCDC57-211ENST00000578187 MYOD1P15172 320 aa9.86□□□□□ -0.83
CCDC57-211ENST00000578187 G6PCP35575 357 aa9.86□□□□□ -0.83
CCDC57-211ENST00000578187 OR2B8PP59922 312 aa9.86□□□□□ -0.83
CCDC57-211ENST00000578187 TTC9CQ8N5M4 171 aa9.86□□□□□ -0.83
CCDC57-211ENST00000578187 OR51S1Q8NGJ8 323 aa9.86□□□□□ -0.83
CCDC57-211ENST00000578187 DEDD2Q8WXF8 326 aa9.86□□□□□ -0.83
CCDC57-211ENST00000578187 OR5B12Q96R08 314 aa9.86□□□□□ -0.83
CCDC57-211ENST00000578187 ZNF355PQ9NSJ1 428 aa9.86□□□□□ -0.83
CCDC57-211ENST00000578187 COA4Q9NYJ1 87 aa9.86□□□□□ -0.83
CCDC57-211ENST00000578187 COPZ2Q9P299 210 aa9.86□□□□□ -0.83
CCDC57-211ENST00000578187 ZNF256Q9Y2P7 627 aaPredicted RBP9.86□□□□□ -0.83
CCDC57-211ENST00000578187 HMX3A6NHT5 357 aa9.85□□□□□ -0.83
CCDC57-211ENST00000578187 NPIPB5A8MRT5 1133 aa9.85□□□□□ -0.83
CCDC57-211ENST00000578187 RPA2P15927 270 aa9.85□□□□□ -0.83
CCDC57-211ENST00000578187 AP3S2P59780 193 aa9.85□□□□□ -0.83
CCDC57-211ENST00000578187 ZNF429Q86V71 674 aa9.85□□□□□ -0.83
CCDC57-211ENST00000578187 SLC25A42Q86VD7 318 aa9.85□□□□□ -0.83
CCDC57-211ENST00000578187 SEC22AQ96IW7 307 aa9.85□□□□□ -0.83
CCDC57-211ENST00000578187 FYTTD1Q96QD9 318 aaKnown RBP9.85□□□□□ -0.83
CCDC57-211ENST00000578187 PRR25Q96S07 402 aa9.85□□□□□ -0.83
CCDC57-211ENST00000578187 TP53RKQ96S44 253 aa9.85□□□□□ -0.83
CCDC57-211ENST00000578187 RTBDNQ9BSG5 229 aaPredicted RBP9.85□□□□□ -0.83
CCDC57-211ENST00000578187 ALX4Q9H161 411 aaPredicted RBP9.85□□□□□ -0.83
CCDC57-211ENST00000578187 C5orf66Q9H5L9 145 aa9.85□□□□□ -0.83
CCDC57-211ENST00000578187 SCP2D1Q9UJQ7 156 aa9.85□□□□□ -0.83
CCDC57-211ENST00000578187 GPR132Q9UNW8 380 aa9.85□□□□□ -0.83
CCDC57-211ENST00000578187 C14orf166Q9Y224 244 aaKnown RBP9.85□□□□□ -0.83
CCDC57-211ENST00000578187 ZNF257Q9Y2Q1 563 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms