RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 C17orf51A8MQB3 221 aa1.19□□□□□ -2.22
COPS3-213ENST00000577210 PIRO00625 290 aa1.19□□□□□ -2.22
COPS3-213ENST00000577210 PDE6DO43924 150 aa1.19□□□□□ -2.22
COPS3-213ENST00000577210 ZNF189O75820 626 aaPredicted RBP1.19□□□□□ -2.22
COPS3-213ENST00000577210 NDUFB2O95178 105 aa1.19□□□□□ -2.22
COPS3-213ENST00000577210 HAND1O96004 215 aa1.19□□□□□ -2.22
COPS3-213ENST00000577210 SRP19P09132 144 aaKnown RBP1.19□□□□□ -2.22
COPS3-213ENST00000577210 HLA-DMBP28068 263 aa1.19□□□□□ -2.22
COPS3-213ENST00000577210 BLVRBP30043 206 aaPredicted RBP1.19□□□□□ -2.22
COPS3-213ENST00000577210 CCR2P41597 374 aa1.19□□□□□ -2.22
COPS3-213ENST00000577210 MAGEA12P43365 314 aa1.19□□□□□ -2.22
COPS3-213ENST00000577210 HINT1P49773 126 aaPredicted RBP1.19□□□□□ -2.22
COPS3-213ENST00000577210 GNG10P50151 68 aa1.19□□□□□ -2.22
COPS3-213ENST00000577210 SERPINB9P50453 376 aa1.19□□□□□ -2.22
COPS3-213ENST00000577210 FKBP1AP62942 108 aaKnown RBP1.19□□□□□ -2.22
COPS3-213ENST00000577210 HBA1P69905 142 aa1.19□□□□□ -2.22
COPS3-213ENST00000577210 TNFRSF9Q07011 255 aa1.19□□□□□ -2.22
COPS3-213ENST00000577210 FOXF1Q12946 379 aa1.19□□□□□ -2.22
COPS3-213ENST00000577210 AKIRIN2Q53H80 203 aa1.19□□□□□ -2.22
COPS3-213ENST00000577210 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.19□□□□□ -2.22
COPS3-213ENST00000577210 KRTAP5-7Q6L8G8 165 aa1.19□□□□□ -2.22
COPS3-213ENST00000577210 ZNF767PQ75MW2 155 aa1.19□□□□□ -2.22
COPS3-213ENST00000577210 SLC35E3Q7Z769 313 aa1.19□□□□□ -2.22
COPS3-213ENST00000577210 NAV1Q8NEY1 1877 aa1.19□□□□□ -2.22
COPS3-213ENST00000577210 OR4C16Q8NGL9 310 aa1.19□□□□□ -2.22
COPS3-213ENST00000577210 OR4X1Q8NH49 305 aa1.19□□□□□ -2.22
COPS3-213ENST00000577210 CLDND2Q8NHS1 167 aa1.19□□□□□ -2.22
COPS3-213ENST00000577210 ZNF675Q8TD23 568 aa1.19□□□□□ -2.22
COPS3-213ENST00000577210 TSPAN32Q96QS1 320 aa1.19□□□□□ -2.22
COPS3-213ENST00000577210 C9orf16Q9BUW7 83 aa1.19□□□□□ -2.22
COPS3-213ENST00000577210 TMEM222Q9H0R3 208 aa1.19□□□□□ -2.22
COPS3-213ENST00000577210 EFCAB1Q9HAE3 211 aa1.19□□□□□ -2.22
COPS3-213ENST00000577210 TXNL4BQ9NX01 149 aaKnown RBP1.19□□□□□ -2.22
COPS3-213ENST00000577210 OPTCQ9UBM4 332 aa1.19□□□□□ -2.22
COPS3-213ENST00000577210 TP73-AS1Q9UF72 201 aa1.19□□□□□ -2.22
COPS3-213ENST00000577210 KLK5Q9Y337 293 aaPredicted RBP1.19□□□□□ -2.22
COPS3-213ENST00000577210 RBM7Q9Y580 266 aaKnown RBP1.19□□□□□ -2.22
COPS3-213ENST00000577210 ROBO3Q96MS0 1386 aa1.19□□□□□ -2.22
COPS3-213ENST00000577210 TTC21AQ8NDW8 1320 aa1.18□□□□□ -2.22
COPS3-213ENST00000577210 WDR90Q96KV7 1748 aa1.18□□□□□ -2.22
COPS3-213ENST00000577210 NUP160Q12769 1436 aa1.18□□□□□ -2.22
COPS3-213ENST00000577210 IGKV1D-43A0A0B4J1Z2 117 aa1.18□□□□□ -2.22
COPS3-213ENST00000577210 EXOC1LA0A1B0GW35 172 aa1.18□□□□□ -2.22
COPS3-213ENST00000577210 A0A1W2PQD3 144 aa1.18□□□□□ -2.22
COPS3-213ENST00000577210 DPRXA6NFQ7 191 aa1.18□□□□□ -2.22
COPS3-213ENST00000577210 RFPL4AA6NLU0 287 aa1.18□□□□□ -2.22
COPS3-213ENST00000577210 FNDC10F2Z333 226 aa1.18□□□□□ -2.22
COPS3-213ENST00000577210 RFPL4AL1F8VTS6 287 aa1.18□□□□□ -2.22
COPS3-213ENST00000577210 C3orf84H3BNL1 204 aa1.18□□□□□ -2.22
COPS3-213ENST00000577210 H3BPC8 53 aa1.18□□□□□ -2.22
COPS3-213ENST00000577210 H3BT86 120 aa1.18□□□□□ -2.22
COPS3-213ENST00000577210 LEPROTO15243 131 aa1.18□□□□□ -2.22
COPS3-213ENST00000577210 HMGB3O15347 200 aaKnown RBP1.18□□□□□ -2.22
COPS3-213ENST00000577210 GNRH2O43555 120 aa1.18□□□□□ -2.22
COPS3-213ENST00000577210 KLRC4O43908 158 aa1.18□□□□□ -2.22
COPS3-213ENST00000577210 NPYP01303 97 aa1.18□□□□□ -2.22
COPS3-213ENST00000577210 IGKV1-5P01602 117 aa1.18□□□□□ -2.22
COPS3-213ENST00000577210 TTRP02766 147 aa1.18□□□□□ -2.22
COPS3-213ENST00000577210 CST2P09228 141 aa1.18□□□□□ -2.22
COPS3-213ENST00000577210 TFPTP0C1Z6 253 aa1.18□□□□□ -2.22
COPS3-213ENST00000577210 SMIM17P0DL12 118 aa1.18□□□□□ -2.22
COPS3-213ENST00000577210 GZMBP10144 247 aa1.18□□□□□ -2.22
COPS3-213ENST00000577210 CSRP1P21291 193 aaKnown RBP1.18□□□□□ -2.22
COPS3-213ENST00000577210 EIF2B2P49770 351 aaKnown RBP1.18□□□□□ -2.22
COPS3-213ENST00000577210 RBM11P57052 281 aaKnown RBP1.18□□□□□ -2.22
COPS3-213ENST00000577210 ARF6P62330 175 aa1.18□□□□□ -2.22
COPS3-213ENST00000577210 ZNF705AQ6ZN79 300 aaPredicted RBP1.18□□□□□ -2.22
COPS3-213ENST00000577210 Q6ZS52 159 aa1.18□□□□□ -2.22
COPS3-213ENST00000577210 LHFPL1Q86WI0 220 aa1.18□□□□□ -2.22
COPS3-213ENST00000577210 STX12Q86Y82 276 aa1.18□□□□□ -2.22
COPS3-213ENST00000577210 ZNF283Q8N7M2 679 aa1.18□□□□□ -2.22
COPS3-213ENST00000577210 GDPD1Q8N9F7 314 aa1.18□□□□□ -2.22
COPS3-213ENST00000577210 AP3S1Q92572 193 aa1.18□□□□□ -2.22
COPS3-213ENST00000577210 BORCS7Q96B45 105 aa1.18□□□□□ -2.22
COPS3-213ENST00000577210 IMMP2LQ96T52 175 aa1.18□□□□□ -2.22
COPS3-213ENST00000577210 CCDC90BQ9GZT6 254 aa1.18□□□□□ -2.22
COPS3-213ENST00000577210 RNASE7Q9H1E1 156 aaKnown RBP1.18□□□□□ -2.22
COPS3-213ENST00000577210 TUBA4BQ9H853 241 aa1.18□□□□□ -2.22
COPS3-213ENST00000577210 NMNAT1Q9HAN9 279 aaPredicted RBP1.18□□□□□ -2.22
COPS3-213ENST00000577210 UQCC1Q9NVA1 299 aa1.18□□□□□ -2.22
COPS3-213ENST00000577210 GID8Q9NWU2 228 aa1.18□□□□□ -2.22
COPS3-213ENST00000577210 FBXL12Q9NXK8 326 aa1.18□□□□□ -2.22
COPS3-213ENST00000577210 IL36BQ9NZH7 164 aa1.18□□□□□ -2.22
COPS3-213ENST00000577210 RSL24D1Q9UHA3 163 aaKnown RBP1.18□□□□□ -2.22
COPS3-213ENST00000577210 NAT8Q9UHE5 227 aa1.18□□□□□ -2.22
COPS3-213ENST00000577210 ARL5AQ9Y689 179 aa1.18□□□□□ -2.22
COPS3-213ENST00000577210 NUP205Q92621 2012 aa1.18□□□□□ -2.22
COPS3-213ENST00000577210 ITGB4P16144 1822 aa1.17□□□□□ -2.22
COPS3-213ENST00000577210 hCG_1818297A0A087WSY0 165 aa1.17□□□□□ -2.22
COPS3-213ENST00000577210 IGHV3-15A0A0B4J1V0 119 aa1.17□□□□□ -2.22
COPS3-213ENST00000577210 TMEM235A6NFC5 223 aa1.17□□□□□ -2.22
COPS3-213ENST00000577210 A8MT66 165 aa1.17□□□□□ -2.22
COPS3-213ENST00000577210 ZNF73O43830 326 aaPredicted RBP1.17□□□□□ -2.22
COPS3-213ENST00000577210 S1PR2O95136 353 aa1.17□□□□□ -2.22
COPS3-213ENST00000577210 ZNF728P0DKX0 622 aa1.17□□□□□ -2.22
COPS3-213ENST00000577210 HIST1H2BOP23527 126 aa1.17□□□□□ -2.22
COPS3-213ENST00000577210 MSNP26038 577 aaKnown RBP1.17□□□□□ -2.22
COPS3-213ENST00000577210 HIST1H2BBP33778 126 aa1.17□□□□□ -2.22
COPS3-213ENST00000577210 RPL28P46779 137 aaKnown RBP1.17□□□□□ -2.22
COPS3-213ENST00000577210 HIST1H2BDP58876 126 aa1.17□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms