RNA–Protein interactions for RNA: ENST00000576241.1

CCDC40-216, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-216ENST00000576241 TNCP24821 2201 aa10.35□□□□□ -0.75
CCDC40-216ENST00000576241 A0A1B0GW64 132 aa10.35□□□□□ -0.75
CCDC40-216ENST00000576241 C2orf70A6NJV1 201 aa10.35□□□□□ -0.75
CCDC40-216ENST00000576241 E7EUB6 86 aa10.35□□□□□ -0.75
CCDC40-216ENST00000576241 LGALS9O00182 355 aa10.35□□□□□ -0.75
CCDC40-216ENST00000576241 SULT1C2O00338 296 aa10.35□□□□□ -0.75
CCDC40-216ENST00000576241 TMEM127O75204 238 aa10.35□□□□□ -0.75
CCDC40-216ENST00000576241 IGHV3-23P01764 117 aa10.35□□□□□ -0.75
CCDC40-216ENST00000576241 TAS2R31P59538 309 aa10.35□□□□□ -0.75
CCDC40-216ENST00000576241 HERV-K104P61576 105 aa10.35□□□□□ -0.75
CCDC40-216ENST00000576241 GUCA2BQ16661 112 aa10.35□□□□□ -0.75
CCDC40-216ENST00000576241 DEFB114Q30KQ6 69 aa10.35□□□□□ -0.75
CCDC40-216ENST00000576241 FAM106AQ4KMX7 169 aa10.35□□□□□ -0.75
CCDC40-216ENST00000576241 OR4A47Q6IF82 309 aa10.35□□□□□ -0.75
CCDC40-216ENST00000576241 CLEC19AQ6UXS0 136 aa10.35□□□□□ -0.75
CCDC40-216ENST00000576241 OR5AP2Q8NGF4 316 aa10.35□□□□□ -0.75
CCDC40-216ENST00000576241 CD300LFQ8TDQ1 290 aa10.35□□□□□ -0.75
CCDC40-216ENST00000576241 BORCS5Q969J3 196 aa10.35□□□□□ -0.75
CCDC40-216ENST00000576241 CCDC140Q96MF4 163 aa10.35□□□□□ -0.75
CCDC40-216ENST00000576241 FANCD2OSQ96PS1 177 aa10.35□□□□□ -0.75
CCDC40-216ENST00000576241 IFT46Q9NQC8 304 aa10.35□□□□□ -0.75
CCDC40-216ENST00000576241 DMRT1Q9Y5R6 373 aa10.35□□□□□ -0.75
CCDC40-216ENST00000576241 TRBV7-1A0A0A6YYK4 115 aa10.34□□□□□ -0.75
CCDC40-216ENST00000576241 ZNF320A2RRD8 509 aa10.34□□□□□ -0.75
CCDC40-216ENST00000576241 NDUFB8O95169 186 aa10.34□□□□□ -0.75
CCDC40-216ENST00000576241 HPRT1P00492 218 aa10.34□□□□□ -0.75
CCDC40-216ENST00000576241 REG1AP05451 166 aa10.34□□□□□ -0.75
CCDC40-216ENST00000576241 NQO2P16083 231 aa10.34□□□□□ -0.75
CCDC40-216ENST00000576241 CTRB1P17538 263 aa10.34□□□□□ -0.75
CCDC40-216ENST00000576241 KCTD21Q4G0X4 260 aa10.34□□□□□ -0.75
CCDC40-216ENST00000576241 AADACL3Q5VUY0 350 aa10.34□□□□□ -0.75
CCDC40-216ENST00000576241 CTRB2Q6GPI1 263 aa10.34□□□□□ -0.75
CCDC40-216ENST00000576241 TMEM17Q86X19 198 aa10.34□□□□□ -0.75
CCDC40-216ENST00000576241 GPHB5Q86YW7 130 aa10.34□□□□□ -0.75
CCDC40-216ENST00000576241 CROCCP3Q8IVE0 287 aa10.34□□□□□ -0.75
CCDC40-216ENST00000576241 OR51H1Q8NH63 302 aa10.34□□□□□ -0.75
CCDC40-216ENST00000576241 GIMAP1Q8WWP7 306 aa10.34□□□□□ -0.75
CCDC40-216ENST00000576241 CXorf58Q96LI9 332 aa10.34□□□□□ -0.75
CCDC40-216ENST00000576241 COMMD5Q9GZQ3 224 aa10.34□□□□□ -0.75
CCDC40-216ENST00000576241 ZC4H2Q9NQZ6 224 aa10.34□□□□□ -0.75
CCDC40-216ENST00000576241 S4R3C0 116 aa10.34□□□□□ -0.75
CCDC40-216ENST00000576241 MEIS3P1A6NDR6 274 aa10.33□□□□□ -0.76
CCDC40-216ENST00000576241 ZNF785A8K8V0 405 aa10.33□□□□□ -0.76
CCDC40-216ENST00000576241 CYB5BO43169 146 aa10.33□□□□□ -0.76
CCDC40-216ENST00000576241 CD7P09564 240 aa10.33□□□□□ -0.76
CCDC40-216ENST00000576241 MYOD1P15172 320 aa10.33□□□□□ -0.76
CCDC40-216ENST00000576241 CBLN1P23435 193 aa10.33□□□□□ -0.76
CCDC40-216ENST00000576241 OR2B8PP59922 312 aa10.33□□□□□ -0.76
CCDC40-216ENST00000576241 SLC16A13Q7RTY0 426 aa10.33□□□□□ -0.76
CCDC40-216ENST00000576241 DMBX1Q8NFW5 382 aa10.33□□□□□ -0.76
CCDC40-216ENST00000576241 S100A16Q96FQ6 103 aaKnown RBP10.33□□□□□ -0.76
CCDC40-216ENST00000576241 EHFQ9NZC4 300 aa10.33□□□□□ -0.76
CCDC40-216ENST00000576241 IGLV11-55A0A075B6I3 123 aa10.32□□□□□ -0.76
CCDC40-216ENST00000576241 OR11H12B2RN74 326 aa10.32□□□□□ -0.76
CCDC40-216ENST00000576241 XRCC3O43542 346 aa10.32□□□□□ -0.76
CCDC40-216ENST00000576241 FGF2P09038 288 aa10.32□□□□□ -0.76
CCDC40-216ENST00000576241 EDN2P20800 178 aa10.32□□□□□ -0.76
CCDC40-216ENST00000576241 ERVK-16P61578 105 aa10.32□□□□□ -0.76
CCDC40-216ENST00000576241 POU2AF1Q16633 256 aa10.32□□□□□ -0.76
CCDC40-216ENST00000576241 KLK9Q2XQG4 91 aa10.32□□□□□ -0.76
CCDC40-216ENST00000576241 ZNF57Q68EA5 555 aaPredicted RBP10.32□□□□□ -0.76
CCDC40-216ENST00000576241 ZNF818PQ6ZRF7 136 aa10.32□□□□□ -0.76
CCDC40-216ENST00000576241 DEFB125Q8N687 156 aa10.32□□□□□ -0.76
CCDC40-216ENST00000576241 CACNG8Q8WXS5 425 aa10.32□□□□□ -0.76
CCDC40-216ENST00000576241 WDR89Q96FK6 387 aaPredicted RBP10.32□□□□□ -0.76
CCDC40-216ENST00000576241 SRSF8Q9BRL6 282 aaKnown RBP10.32□□□□□ -0.76
CCDC40-216ENST00000576241 SRD5A3Q9H8P0 318 aa10.32□□□□□ -0.76
CCDC40-216ENST00000576241 PLEKHA2Q9HB19 425 aa10.32□□□□□ -0.76
CCDC40-216ENST00000576241 TMEM140Q9NV12 185 aa10.32□□□□□ -0.76
CCDC40-216ENST00000576241 COMMD9Q9P000 198 aa10.32□□□□□ -0.76
CCDC40-216ENST00000576241 THYN1Q9P016 225 aa10.32□□□□□ -0.76
CCDC40-216ENST00000576241 KLK9Q9UKQ9 250 aa10.32□□□□□ -0.76
CCDC40-216ENST00000576241 IGLC7A0M8Q6 106 aa10.31□□□□□ -0.76
CCDC40-216ENST00000576241 MFSD2BA6NFX1 497 aa10.31□□□□□ -0.76
CCDC40-216ENST00000576241 CGB1A6NKQ9 187 aa10.31□□□□□ -0.76
CCDC40-216ENST00000576241 A8MWP6 167 aa10.31□□□□□ -0.76
CCDC40-216ENST00000576241 UPK2O00526 184 aa10.31□□□□□ -0.76
CCDC40-216ENST00000576241 JTBO76095 146 aa10.31□□□□□ -0.76
CCDC40-216ENST00000576241 S1PR2O95136 353 aa10.31□□□□□ -0.76
CCDC40-216ENST00000576241 CLEC3BP05452 202 aa10.31□□□□□ -0.76
CCDC40-216ENST00000576241 UBE2NLQ5JXB2 153 aa10.31□□□□□ -0.76
CCDC40-216ENST00000576241 TMEM69Q5SWH9 247 aa10.31□□□□□ -0.76
CCDC40-216ENST00000576241 THOC7Q6I9Y2 204 aaKnown RBP10.31□□□□□ -0.76
CCDC40-216ENST00000576241 LINC00322Q6ZN03 302 aaPredicted RBP10.31□□□□□ -0.76
CCDC40-216ENST00000576241 QTRT1Q9BXR0 403 aaKnown RBP10.31□□□□□ -0.76
CCDC40-216ENST00000576241 WFDC10AQ9H1F0 79 aa10.31□□□□□ -0.76
CCDC40-216ENST00000576241 HIPK2Q9H2X6 1198 aa10.31□□□□□ -0.76
CCDC40-216ENST00000576241 RETNQ9HD89 108 aa10.31□□□□□ -0.76
CCDC40-216ENST00000576241 VCX3AQ9NNX9 186 aa10.31□□□□□ -0.76
CCDC40-216ENST00000576241 TRAV3A0A0B4J244 114 aa10.3□□□□□ -0.76
CCDC40-216ENST00000576241 TMEM213A2RRL7 107 aa10.3□□□□□ -0.76
CCDC40-216ENST00000576241 RPA2P15927 270 aa10.3□□□□□ -0.76
CCDC40-216ENST00000576241 GNRHRP30968 328 aa10.3□□□□□ -0.76
CCDC40-216ENST00000576241 GPR183P32249 361 aa10.3□□□□□ -0.76
CCDC40-216ENST00000576241 TAS2R46P59540 309 aa10.3□□□□□ -0.76
CCDC40-216ENST00000576241 ANKRD55Q3KP44 614 aa10.3□□□□□ -0.76
CCDC40-216ENST00000576241 CMTM1Q8IZ96 169 aa10.3□□□□□ -0.76
CCDC40-216ENST00000576241 TMEM61Q8N0U2 210 aa10.3□□□□□ -0.76
CCDC40-216ENST00000576241 SAMD12Q8N8I0 201 aa10.3□□□□□ -0.76
CCDC40-216ENST00000576241 UXS1Q8NBZ7 420 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms