RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 PTBP1P26599 531 aaKnown RBP eCLIP11.81□□□□□ -0.52
CTDNEP1-211ENST00000575783 RPL30P62888 115 aaKnown RBP11.81□□□□□ -0.52
CTDNEP1-211ENST00000575783 PHYHIPQ92561 330 aa11.81□□□□□ -0.52
CTDNEP1-211ENST00000575783 RNF2Q99496 336 aa11.81□□□□□ -0.52
CTDNEP1-211ENST00000575783 CD1AP06126 327 aa11.8□□□□□ -0.52
CTDNEP1-211ENST00000575783 FCGR3AP08637 254 aa11.8□□□□□ -0.52
CTDNEP1-211ENST00000575783 PUSL1Q8N0Z8 303 aaKnown RBP11.8□□□□□ -0.52
CTDNEP1-211ENST00000575783 GBGT1Q8N5D6 347 aa11.8□□□□□ -0.52
CTDNEP1-211ENST00000575783 PLGRKTQ9HBL7 147 aa11.8□□□□□ -0.52
CTDNEP1-211ENST00000575783 THYN1Q9P016 225 aa11.8□□□□□ -0.52
CTDNEP1-211ENST00000575783 APOBP04114 4563 aaKnown RBP11.79□□□□□ -0.52
CTDNEP1-211ENST00000575783 NDUFA4O00483 81 aa11.79□□□□□ -0.52
CTDNEP1-211ENST00000575783 CIB2O75838 187 aa11.79□□□□□ -0.52
CTDNEP1-211ENST00000575783 IFNA10P01566 189 aa11.79□□□□□ -0.52
CTDNEP1-211ENST00000575783 RPL8P62917 257 aaKnown RBP11.79□□□□□ -0.52
CTDNEP1-211ENST00000575783 ST3GAL4Q11206 333 aa11.79□□□□□ -0.52
CTDNEP1-211ENST00000575783 SOHLH1Q5JUK2 328 aa11.79□□□□□ -0.52
CTDNEP1-211ENST00000575783 ZNF767PQ75MW2 155 aa11.79□□□□□ -0.52
CTDNEP1-211ENST00000575783 H1FOOQ8IZA3 346 aaPredicted RBP11.79□□□□□ -0.52
CTDNEP1-211ENST00000575783 OR56B1Q8NGI3 324 aa11.79□□□□□ -0.52
CTDNEP1-211ENST00000575783 ETV7Q9Y603 341 aa11.79□□□□□ -0.52
CTDNEP1-211ENST00000575783 DEFB131BA0A096LNP1 70 aa11.78□□□□□ -0.52
CTDNEP1-211ENST00000575783 IGHV3-49A0A0A0MS15 119 aa11.78□□□□□ -0.52
CTDNEP1-211ENST00000575783 EFCAB10A6NFE3 127 aa11.78□□□□□ -0.52
CTDNEP1-211ENST00000575783 CGB1A6NKQ9 187 aa11.78□□□□□ -0.52
CTDNEP1-211ENST00000575783 C15orf61A6NNL5 157 aa11.78□□□□□ -0.52
CTDNEP1-211ENST00000575783 C16orf90A8MZG2 172 aa11.78□□□□□ -0.52
CTDNEP1-211ENST00000575783 K7EMT4 169 aa11.78□□□□□ -0.52
CTDNEP1-211ENST00000575783 CDK2AP2O75956 126 aa11.78□□□□□ -0.52
CTDNEP1-211ENST00000575783 DIRAS3O95661 229 aa11.78□□□□□ -0.52
CTDNEP1-211ENST00000575783 CDK1P06493 297 aa11.78□□□□□ -0.52
CTDNEP1-211ENST00000575783 HLA-GP17693 338 aa11.78□□□□□ -0.52
CTDNEP1-211ENST00000575783 HSD17B12Q53GQ0 312 aa11.78□□□□□ -0.52
CTDNEP1-211ENST00000575783 ZNF555Q8NEP9 628 aa11.78□□□□□ -0.52
CTDNEP1-211ENST00000575783 OR4S2Q8NH73 311 aa11.78□□□□□ -0.52
CTDNEP1-211ENST00000575783 TCTEX1D2Q8WW35 142 aa11.78□□□□□ -0.52
CTDNEP1-211ENST00000575783 NDUFAF3Q9BU61 184 aa11.78□□□□□ -0.52
CTDNEP1-211ENST00000575783 C9orf16Q9BUW7 83 aa11.78□□□□□ -0.52
CTDNEP1-211ENST00000575783 RHPN1-AS1Q9BWJ2 59 aa11.78□□□□□ -0.52
CTDNEP1-211ENST00000575783 SMPXQ9UHP9 88 aa11.78□□□□□ -0.52
CTDNEP1-211ENST00000575783 KCNK7Q9Y2U2 307 aa11.78□□□□□ -0.52
CTDNEP1-211ENST00000575783 IGHV3-21A0A0B4J1V1 117 aa11.77□□□□□ -0.53
CTDNEP1-211ENST00000575783 MYL12BO14950 172 aa11.77□□□□□ -0.53
CTDNEP1-211ENST00000575783 AMBPP02760 352 aa11.77□□□□□ -0.53
CTDNEP1-211ENST00000575783 CD37P11049 281 aa11.77□□□□□ -0.53
CTDNEP1-211ENST00000575783 LEMD1Q68G75 181 aa11.77□□□□□ -0.53
CTDNEP1-211ENST00000575783 VN1R17PQ8TDU5 208 aa11.77□□□□□ -0.53
CTDNEP1-211ENST00000575783 BSCL2Q96G97 398 aaPredicted RBP11.77□□□□□ -0.53
CTDNEP1-211ENST00000575783 SCRT1Q9BWW7 348 aa11.77□□□□□ -0.53
CTDNEP1-211ENST00000575783 SPATA2Q9UM82 520 aa11.77□□□□□ -0.53
CTDNEP1-211ENST00000575783 RBMX2Q9Y388 322 aaKnown RBP11.77□□□□□ -0.53
CTDNEP1-211ENST00000575783 DNAH5Q8TE73 4624 aa11.77□□□□□ -0.53
CTDNEP1-211ENST00000575783 A0A075B6Q4 140 aa11.76□□□□□ -0.53
CTDNEP1-211ENST00000575783 ELOA3CA0A087WX78 387 aaPredicted RBP11.76□□□□□ -0.53
CTDNEP1-211ENST00000575783 CHEK1O14757 476 aa11.76□□□□□ -0.53
CTDNEP1-211ENST00000575783 MIFP14174 115 aa11.76□□□□□ -0.53
CTDNEP1-211ENST00000575783 CD36P16671 472 aa11.76□□□□□ -0.53
CTDNEP1-211ENST00000575783 RASSF2P50749 326 aa11.76□□□□□ -0.53
CTDNEP1-211ENST00000575783 WNT4P56705 351 aa11.76□□□□□ -0.53
CTDNEP1-211ENST00000575783 CLDN12P56749 244 aa11.76□□□□□ -0.53
CTDNEP1-211ENST00000575783 OR2B8PP59922 312 aa11.76□□□□□ -0.53
CTDNEP1-211ENST00000575783 IRF3Q14653 427 aa11.76□□□□□ -0.53
CTDNEP1-211ENST00000575783 RAB11BQ15907 218 aa11.76□□□□□ -0.53
CTDNEP1-211ENST00000575783 UBE2DNLQ8IWF7 75 aa11.76□□□□□ -0.53
CTDNEP1-211ENST00000575783 MS4A15Q8N5U1 240 aa11.76□□□□□ -0.53
CTDNEP1-211ENST00000575783 UBAC2Q8NBM4 344 aa11.76□□□□□ -0.53
CTDNEP1-211ENST00000575783 RAB3CQ96E17 227 aa11.76□□□□□ -0.53
CTDNEP1-211ENST00000575783 CMTM3Q96MX0 182 aa11.76□□□□□ -0.53
CTDNEP1-211ENST00000575783 HRASLSQ9HDD0 168 aa11.76□□□□□ -0.53
CTDNEP1-211ENST00000575783 IGLC7A0M8Q6 106 aa11.75□□□□□ -0.53
CTDNEP1-211ENST00000575783 C15orf62A8K5M9 175 aa11.75□□□□□ -0.53
CTDNEP1-211ENST00000575783 SLC17A2O00624 439 aa11.75□□□□□ -0.53
CTDNEP1-211ENST00000575783 DENRO43583 198 aaKnown RBP11.75□□□□□ -0.53
CTDNEP1-211ENST00000575783 HRASP01112 189 aa11.75□□□□□ -0.53
CTDNEP1-211ENST00000575783 IFNA21P01568 189 aa11.75□□□□□ -0.53
CTDNEP1-211ENST00000575783 IFNA17P01571 189 aa11.75□□□□□ -0.53
CTDNEP1-211ENST00000575783 GNB3P16520 340 aa11.75□□□□□ -0.53
CTDNEP1-211ENST00000575783 BRWD1-AS2P59051 145 aa11.75□□□□□ -0.53
CTDNEP1-211ENST00000575783 PLA2G7Q13093 441 aa11.75□□□□□ -0.53
CTDNEP1-211ENST00000575783 C2orf76Q3KRA6 126 aa11.75□□□□□ -0.53
CTDNEP1-211ENST00000575783 SLC25A24Q6NUK1 477 aa11.75□□□□□ -0.53
CTDNEP1-211ENST00000575783 SPSB3Q6PJ21 355 aa11.75□□□□□ -0.53
CTDNEP1-211ENST00000575783 Q6ZR54 194 aa11.75□□□□□ -0.53
CTDNEP1-211ENST00000575783 Q8N1X5 172 aa11.75□□□□□ -0.53
CTDNEP1-211ENST00000575783 TMEM116Q8NCL8 245 aa11.75□□□□□ -0.53
CTDNEP1-211ENST00000575783 GFI1Q99684 422 aa11.75□□□□□ -0.53
CTDNEP1-211ENST00000575783 SCRT2Q9NQ03 307 aa11.75□□□□□ -0.53
CTDNEP1-211ENST00000575783 AK6Q9Y3D8 172 aaKnown RBP11.75□□□□□ -0.53
CTDNEP1-211ENST00000575783 IGHV3OR16-13A0A075B7E8 117 aa11.74□□□□□ -0.53
CTDNEP1-211ENST00000575783 IGKV1D-8A0A087WSZ0 117 aa11.74□□□□□ -0.53
CTDNEP1-211ENST00000575783 IGHV3-74A0A0B4J1X5 117 aa11.74□□□□□ -0.53
CTDNEP1-211ENST00000575783 IGHV7-4-1A0A0J9YVY3 117 aa11.74□□□□□ -0.53
CTDNEP1-211ENST00000575783 YIF1AO95070 293 aa11.74□□□□□ -0.53
CTDNEP1-211ENST00000575783 IGLV2-14P01704 120 aa11.74□□□□□ -0.53
CTDNEP1-211ENST00000575783 NFYAP23511 347 aaPredicted RBP11.74□□□□□ -0.53
CTDNEP1-211ENST00000575783 TALDO1P37837 337 aa11.74□□□□□ -0.53
CTDNEP1-211ENST00000575783 DEFB131AP59861 70 aa11.74□□□□□ -0.53
CTDNEP1-211ENST00000575783 PAFAH1B2P68402 229 aa11.74□□□□□ -0.53
CTDNEP1-211ENST00000575783 C12orf74Q32Q52 190 aa11.74□□□□□ -0.53
CTDNEP1-211ENST00000575783 C1orf134Q5TEV5 83 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms