RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 NAA60Q9H7X0 242 aa10.37□□□□□ -0.75
RPAIN-216ENST00000575599 PRELID3BQ9Y3B1 194 aa10.37□□□□□ -0.75
RPAIN-216ENST00000575599 PLXNB1O43157 2135 aa10.37□□□□□ -0.75
RPAIN-216ENST00000575599 C3orf85A0A1B0GTC6 90 aa10.36□□□□□ -0.75
RPAIN-216ENST00000575599 CRYM-AS1A6NIL9 109 aa10.36□□□□□ -0.75
RPAIN-216ENST00000575599 SRRM4A7MD48 611 aaKnown RBP10.36□□□□□ -0.75
RPAIN-216ENST00000575599 SSNA1O43805 119 aa10.36□□□□□ -0.75
RPAIN-216ENST00000575599 CNIH1O95406 144 aa10.36□□□□□ -0.75
RPAIN-216ENST00000575599 PSMB8P28062 276 aa10.36□□□□□ -0.75
RPAIN-216ENST00000575599 PPIFP30405 207 aaKnown RBP10.36□□□□□ -0.75
RPAIN-216ENST00000575599 MECP2P51608 486 aaKnown RBP10.36□□□□□ -0.75
RPAIN-216ENST00000575599 PJVKQ0ZLH3 352 aa10.36□□□□□ -0.75
RPAIN-216ENST00000575599 PPP1R1AQ13522 171 aa10.36□□□□□ -0.75
RPAIN-216ENST00000575599 FXYD3Q14802 87 aa10.36□□□□□ -0.75
RPAIN-216ENST00000575599 DEFB136Q30KP8 78 aa10.36□□□□□ -0.75
RPAIN-216ENST00000575599 VMA21Q3ZAQ7 101 aa10.36□□□□□ -0.75
RPAIN-216ENST00000575599 UNQ5815/PRO19632Q6UWF5 114 aa10.36□□□□□ -0.75
RPAIN-216ENST00000575599 ZNF562Q6V9R5 426 aa10.36□□□□□ -0.75
RPAIN-216ENST00000575599 ETV3LQ6ZN32 361 aa10.36□□□□□ -0.75
RPAIN-216ENST00000575599 LYG2Q86SG7 212 aa10.36□□□□□ -0.75
RPAIN-216ENST00000575599 RNF152Q8N8N0 203 aa10.36□□□□□ -0.75
RPAIN-216ENST00000575599 UXS1Q8NBZ7 420 aa10.36□□□□□ -0.75
RPAIN-216ENST00000575599 OR51H1Q8NH63 302 aa10.36□□□□□ -0.75
RPAIN-216ENST00000575599 COQ8AQ8NI60 647 aa10.36□□□□□ -0.75
RPAIN-216ENST00000575599 DUX3Q96PT4 197 aa10.36□□□□□ -0.75
RPAIN-216ENST00000575599 SEC22CQ9BRL7 303 aa10.36□□□□□ -0.75
RPAIN-216ENST00000575599 ALG5Q9Y673 324 aa10.36□□□□□ -0.75
RPAIN-216ENST00000575599 PIGBOS1A0A0B4J2F0 54 aa10.35□□□□□ -0.75
RPAIN-216ENST00000575599 C9orf170A2RU37 121 aa10.35□□□□□ -0.75
RPAIN-216ENST00000575599 SNRPGP15A8MWD9 76 aa10.35□□□□□ -0.75
RPAIN-216ENST00000575599 B3GALNT1O75752 331 aa10.35□□□□□ -0.75
RPAIN-216ENST00000575599 SFT2D2O95562 160 aa10.35□□□□□ -0.75
RPAIN-216ENST00000575599 CRYGBP07316 175 aa10.35□□□□□ -0.75
RPAIN-216ENST00000575599 EGR2P11161 476 aaPredicted RBP10.35□□□□□ -0.75
RPAIN-216ENST00000575599 DHODHQ02127 395 aa10.35□□□□□ -0.75
RPAIN-216ENST00000575599 TMEM267Q0VDI3 215 aaPredicted RBP10.35□□□□□ -0.75
RPAIN-216ENST00000575599 DHRS2Q13268 280 aa10.35□□□□□ -0.75
RPAIN-216ENST00000575599 SAMD5Q5TGI4 173 aa10.35□□□□□ -0.75
RPAIN-216ENST00000575599 LFNGQ8NES3 379 aa10.35□□□□□ -0.75
RPAIN-216ENST00000575599 OSR1Q8TAX0 266 aaPredicted RBP10.35□□□□□ -0.75
RPAIN-216ENST00000575599 ZNF431Q8TF32 576 aaPredicted RBP10.35□□□□□ -0.75
RPAIN-216ENST00000575599 TMEM230Q96A57 120 aa10.35□□□□□ -0.75
RPAIN-216ENST00000575599 PHB2Q99623 299 aa10.35□□□□□ -0.75
RPAIN-216ENST00000575599 KLK15Q9H2R5 256 aa10.35□□□□□ -0.75
RPAIN-216ENST00000575599 FOXA2Q9Y261 457 aaPredicted RBP10.35□□□□□ -0.75
RPAIN-216ENST00000575599 IGLV1-40P01703 118 aa10.34□□□□□ -0.75
RPAIN-216ENST00000575599 SERPINE2P07093 398 aa10.34□□□□□ -0.75
RPAIN-216ENST00000575599 SAA1P0DJI8 122 aaPredicted RBP10.34□□□□□ -0.75
RPAIN-216ENST00000575599 IGLL1P15814 213 aa10.34□□□□□ -0.75
RPAIN-216ENST00000575599 F2RP25116 425 aa10.34□□□□□ -0.75
RPAIN-216ENST00000575599 KIR2DS2P43631 304 aa10.34□□□□□ -0.75
RPAIN-216ENST00000575599 CRIP2P52943 208 aaPredicted RBP10.34□□□□□ -0.75
RPAIN-216ENST00000575599 UBE2KP61086 200 aa10.34□□□□□ -0.75
RPAIN-216ENST00000575599 SRPXP78539 464 aa10.34□□□□□ -0.75
RPAIN-216ENST00000575599 EIF4EBP1Q13541 118 aaPredicted RBP10.34□□□□□ -0.75
RPAIN-216ENST00000575599 C19orf54Q5BKX5 351 aa10.34□□□□□ -0.75
RPAIN-216ENST00000575599 MRPL41Q8IXM3 137 aaKnown RBP10.34□□□□□ -0.75
RPAIN-216ENST00000575599 C12orf45Q8N5I9 185 aaPredicted RBP10.34□□□□□ -0.75
RPAIN-216ENST00000575599 TCTEX1D1Q8N7M0 179 aa10.34□□□□□ -0.75
RPAIN-216ENST00000575599 OR52B4Q8NGK2 314 aa10.34□□□□□ -0.75
RPAIN-216ENST00000575599 OR4S2Q8NH73 311 aa10.34□□□□□ -0.75
RPAIN-216ENST00000575599 CD300LFQ8TDQ1 290 aa10.34□□□□□ -0.75
RPAIN-216ENST00000575599 MED28Q9H204 178 aa10.34□□□□□ -0.75
RPAIN-216ENST00000575599 H0Y980 276 aa10.33□□□□□ -0.76
RPAIN-216ENST00000575599 SOX15O60248 233 aa10.33□□□□□ -0.76
RPAIN-216ENST00000575599 DUS4LO95620 317 aaKnown RBP10.33□□□□□ -0.76
RPAIN-216ENST00000575599 OR5AC1P0C628 307 aa10.33□□□□□ -0.76
RPAIN-216ENST00000575599 MYCNOSP40205 109 aa10.33□□□□□ -0.76
RPAIN-216ENST00000575599 CDX1P47902 265 aaPredicted RBP10.33□□□□□ -0.76
RPAIN-216ENST00000575599 RAB9AP51151 201 aa10.33□□□□□ -0.76
RPAIN-216ENST00000575599 SSBP2P81877 361 aaPredicted RBP10.33□□□□□ -0.76
RPAIN-216ENST00000575599 TNXAQ16473 311 aa10.33□□□□□ -0.76
RPAIN-216ENST00000575599 SP6Q3SY56 376 aa10.33□□□□□ -0.76
RPAIN-216ENST00000575599 VKORC1L1Q8N0U8 176 aa10.33□□□□□ -0.76
RPAIN-216ENST00000575599 LGI3Q8N145 548 aa10.33□□□□□ -0.76
RPAIN-216ENST00000575599 LINC00482Q8N8I6 264 aa10.33□□□□□ -0.76
RPAIN-216ENST00000575599 TEX45Q8NA69 505 aa10.33□□□□□ -0.76
RPAIN-216ENST00000575599 C4orf3Q8WVX3 66 aa10.33□□□□□ -0.76
RPAIN-216ENST00000575599 RAX2Q96IS3 184 aa10.33□□□□□ -0.76
RPAIN-216ENST00000575599 OR5B12Q96R08 314 aa10.33□□□□□ -0.76
RPAIN-216ENST00000575599 GNB4Q9HAV0 340 aa10.33□□□□□ -0.76
RPAIN-216ENST00000575599 C7orf66A4D0T2 115 aa10.32□□□□□ -0.76
RPAIN-216ENST00000575599 CCL24O00175 119 aa10.32□□□□□ -0.76
RPAIN-216ENST00000575599 ATG12O94817 140 aa10.32□□□□□ -0.76
RPAIN-216ENST00000575599 APELAP0DMC3 54 aa10.32□□□□□ -0.76
RPAIN-216ENST00000575599 PRSS8Q16651 343 aa10.32□□□□□ -0.76
RPAIN-216ENST00000575599 BEAN1Q3B7T3 259 aa10.32□□□□□ -0.76
RPAIN-216ENST00000575599 AKIRIN2Q53H80 203 aa10.32□□□□□ -0.76
RPAIN-216ENST00000575599 SPAG16Q8N0X2 631 aa10.32□□□□□ -0.76
RPAIN-216ENST00000575599 ZNF491Q8N8L2 437 aa10.32□□□□□ -0.76
RPAIN-216ENST00000575599 WFDC9Q8NEX5 89 aa10.32□□□□□ -0.76
RPAIN-216ENST00000575599 OR5M8Q8NGP6 311 aa10.32□□□□□ -0.76
RPAIN-216ENST00000575599 RNASE11Q8TAA1 199 aaKnown RBP10.32□□□□□ -0.76
RPAIN-216ENST00000575599 MYOZ3Q8TDC0 251 aa10.32□□□□□ -0.76
RPAIN-216ENST00000575599 GALNT14Q96FL9 552 aa10.32□□□□□ -0.76
RPAIN-216ENST00000575599 MS4A10Q96PG2 267 aa10.32□□□□□ -0.76
RPAIN-216ENST00000575599 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.31□□□□□ -0.76
RPAIN-216ENST00000575599 RAMP3O60896 148 aa10.31□□□□□ -0.76
RPAIN-216ENST00000575599 ACTL6BO94805 426 aa10.31□□□□□ -0.76
RPAIN-216ENST00000575599 BRWD1-AS2P59051 145 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms