RNA–Protein interactions for RNA: ENST00000575461.1

CALCOCO2-226, Transcript of calcium binding and coiled-coil domain 2, humanhuman

Gene CALCOCO2, Length 465 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-226ENST00000575461 CACNA1SQ13698 1873 aa4.29□□□□□ -1.72
CALCOCO2-226ENST00000575461 TMEM269A0A1B0GVZ9 245 aa4.29□□□□□ -1.72
CALCOCO2-226ENST00000575461 FAM159BA6NKW6 160 aa4.29□□□□□ -1.72
CALCOCO2-226ENST00000575461 CD5P06127 495 aa4.29□□□□□ -1.72
CALCOCO2-226ENST00000575461 S100A7P31151 101 aa4.29□□□□□ -1.72
CALCOCO2-226ENST00000575461 CSN1S1P47710 185 aa4.29□□□□□ -1.72
CALCOCO2-226ENST00000575461 RPS20P60866 119 aaKnown RBP4.29□□□□□ -1.72
CALCOCO2-226ENST00000575461 KRTAP13-3Q3SY46 172 aa4.29□□□□□ -1.72
CALCOCO2-226ENST00000575461 SLC36A1Q7Z2H8 476 aa4.29□□□□□ -1.72
CALCOCO2-226ENST00000575461 ZNF283Q8N7M2 679 aa4.29□□□□□ -1.72
CALCOCO2-226ENST00000575461 GDPD1Q8N9F7 314 aa4.29□□□□□ -1.72
CALCOCO2-226ENST00000575461 LINC00304Q8N9R0 145 aa4.29□□□□□ -1.72
CALCOCO2-226ENST00000575461 OR52L1Q8NGH7 329 aa4.29□□□□□ -1.72
CALCOCO2-226ENST00000575461 ZNF675Q8TD23 568 aa4.29□□□□□ -1.72
CALCOCO2-226ENST00000575461 PRRT1Q99946 306 aa4.29□□□□□ -1.72
CALCOCO2-226ENST00000575461 C14orf105Q9NVL8 296 aa4.29□□□□□ -1.72
CALCOCO2-226ENST00000575461 ZNF532Q9HCE3 1301 aa4.28□□□□□ -1.72
CALCOCO2-226ENST00000575461 A0A1W2PQD3 144 aa4.28□□□□□ -1.72
CALCOCO2-226ENST00000575461 VPS37CA5D8V6 355 aaPredicted RBP4.28□□□□□ -1.72
CALCOCO2-226ENST00000575461 KRTAP9-6A8MVA2 160 aa4.28□□□□□ -1.72
CALCOCO2-226ENST00000575461 ZNF189O75820 626 aaPredicted RBP4.28□□□□□ -1.72
CALCOCO2-226ENST00000575461 OR5C1Q8NGR4 320 aa4.28□□□□□ -1.72
CALCOCO2-226ENST00000575461 NIPSNAP1Q9BPW8 284 aa4.28□□□□□ -1.72
CALCOCO2-226ENST00000575461 EFCAB1Q9HAE3 211 aa4.28□□□□□ -1.72
CALCOCO2-226ENST00000575461 ENY2Q9NPA8 101 aa4.28□□□□□ -1.72
CALCOCO2-226ENST00000575461 FBXL12Q9NXK8 326 aa4.28□□□□□ -1.72
CALCOCO2-226ENST00000575461 SHANK3Q9BYB0 1731 aa4.28□□□□□ -1.72
CALCOCO2-226ENST00000575461 CACNA1DQ01668 2161 aa4.27□□□□□ -1.73
CALCOCO2-226ENST00000575461 ATG2BQ96BY7 2078 aa4.27□□□□□ -1.73
CALCOCO2-226ENST00000575461 IGLV10-54A0A075B6I4 117 aa4.27□□□□□ -1.73
CALCOCO2-226ENST00000575461 TMEM238C9JI98 176 aa4.27□□□□□ -1.73
CALCOCO2-226ENST00000575461 UCHL1P09936 223 aa4.27□□□□□ -1.73
CALCOCO2-226ENST00000575461 RPL19P84098 196 aaKnown RBP4.27□□□□□ -1.73
CALCOCO2-226ENST00000575461 KRR1Q13601 381 aaKnown RBP4.27□□□□□ -1.73
CALCOCO2-226ENST00000575461 MIAQ16674 131 aa4.27□□□□□ -1.73
CALCOCO2-226ENST00000575461 TCF24Q7RTU0 167 aa4.27□□□□□ -1.73
CALCOCO2-226ENST00000575461 TTTY13Q9BZ97 58 aa4.27□□□□□ -1.73
CALCOCO2-226ENST00000575461 CISHQ9NSE2 258 aa4.27□□□□□ -1.73
CALCOCO2-226ENST00000575461 OPTCQ9UBM4 332 aa4.27□□□□□ -1.73
CALCOCO2-226ENST00000575461 FUT9Q9Y231 359 aa4.27□□□□□ -1.73
CALCOCO2-226ENST00000575461 FAM215AQ9Y5M1 114 aa4.27□□□□□ -1.73
CALCOCO2-226ENST00000575461 MINOS1-NBL1R4GNA1 71 aa4.27□□□□□ -1.73
CALCOCO2-226ENST00000575461 REREQ9P2R6 1566 aa4.27□□□□□ -1.73
CALCOCO2-226ENST00000575461 PIRO00625 290 aa4.26□□□□□ -1.73
CALCOCO2-226ENST00000575461 SERPINE1P05121 402 aa4.26□□□□□ -1.73
CALCOCO2-226ENST00000575461 CTSGP08311 255 aa4.26□□□□□ -1.73
CALCOCO2-226ENST00000575461 GNG10P50151 68 aa4.26□□□□□ -1.73
CALCOCO2-226ENST00000575461 CCL20P78556 96 aa4.26□□□□□ -1.73
CALCOCO2-226ENST00000575461 POU6F1Q14863 301 aa4.26□□□□□ -1.73
CALCOCO2-226ENST00000575461 C9orf64Q5T6V5 341 aa4.26□□□□□ -1.73
CALCOCO2-226ENST00000575461 C20orf27Q9GZN8 174 aa4.26□□□□□ -1.73
CALCOCO2-226ENST00000575461 RNASE7Q9H1E1 156 aaKnown RBP4.26□□□□□ -1.73
CALCOCO2-226ENST00000575461 ATPIF1Q9UII2 106 aa4.26□□□□□ -1.73
CALCOCO2-226ENST00000575461 NACADO15069 1562 aa4.26□□□□□ -1.73
CALCOCO2-226ENST00000575461 RTL1A6NKG5 1358 aa4.26□□□□□ -1.73
CALCOCO2-226ENST00000575461 CYBAP13498 195 aa4.25□□□□□ -1.73
CALCOCO2-226ENST00000575461 HBA1P69905 142 aa4.25□□□□□ -1.73
CALCOCO2-226ENST00000575461 OR4C16Q8NGL9 310 aa4.25□□□□□ -1.73
CALCOCO2-226ENST00000575461 FGF13Q92913 245 aa4.25□□□□□ -1.73
CALCOCO2-226ENST00000575461 UQCC1Q9NVA1 299 aa4.25□□□□□ -1.73
CALCOCO2-226ENST00000575461 SHROOM3Q8TF72 1996 aa4.24□□□□□ -1.73
CALCOCO2-226ENST00000575461 A0A0J9YX75 114 aa4.24□□□□□ -1.73
CALCOCO2-226ENST00000575461 MDFIC2A0A1B0GVS7 189 aa4.24□□□□□ -1.73
CALCOCO2-226ENST00000575461 EXOC1LA0A1B0GW35 172 aa4.24□□□□□ -1.73
CALCOCO2-226ENST00000575461 RBP1P09455 135 aa4.24□□□□□ -1.73
CALCOCO2-226ENST00000575461 ZNF728P0DKX0 622 aa4.24□□□□□ -1.73
CALCOCO2-226ENST00000575461 CA5AP35218 305 aa4.24□□□□□ -1.73
CALCOCO2-226ENST00000575461 C12orf74Q32Q52 190 aa4.24□□□□□ -1.73
CALCOCO2-226ENST00000575461 GNPDA2Q8TDQ7 276 aa4.24□□□□□ -1.73
CALCOCO2-226ENST00000575461 CCDC90BQ9GZT6 254 aa4.24□□□□□ -1.73
CALCOCO2-226ENST00000575461 SHANK1Q9Y566 2161 aa4.23□□□□□ -1.73
CALCOCO2-226ENST00000575461 GNRH2O43555 120 aa4.23□□□□□ -1.73
CALCOCO2-226ENST00000575461 C1QAP02745 245 aa4.23□□□□□ -1.73
CALCOCO2-226ENST00000575461 HIST1H4AP62805 103 aaKnown RBP4.23□□□□□ -1.73
CALCOCO2-226ENST00000575461 LYG2Q86SG7 212 aa4.23□□□□□ -1.73
CALCOCO2-226ENST00000575461 OR13C4Q8NGS5 318 aa4.23□□□□□ -1.73
CALCOCO2-226ENST00000575461 TOMM6Q96B49 74 aa4.23□□□□□ -1.73
CALCOCO2-226ENST00000575461 SELENOSQ9BQE4 189 aa4.23□□□□□ -1.73
CALCOCO2-226ENST00000575461 ZNF471Q9BX82 626 aaPredicted RBP4.23□□□□□ -1.73
CALCOCO2-226ENST00000575461 IL36BQ9NZH7 164 aa4.23□□□□□ -1.73
CALCOCO2-226ENST00000575461 PSORS1C2Q9UIG4 136 aa4.23□□□□□ -1.73
CALCOCO2-226ENST00000575461 ROBO3Q96MS0 1386 aa4.23□□□□□ -1.73
CALCOCO2-226ENST00000575461 SIPA1L1O43166 1804 aa4.23□□□□□ -1.73
CALCOCO2-226ENST00000575461 HECW2Q9P2P5 1572 aa4.23□□□□□ -1.73
CALCOCO2-226ENST00000575461 DPRXA6NFQ7 191 aa4.22□□□□□ -1.73
CALCOCO2-226ENST00000575461 C11orf86A6NJI1 115 aa4.22□□□□□ -1.73
CALCOCO2-226ENST00000575461 LEPROTO15243 131 aa4.22□□□□□ -1.73
CALCOCO2-226ENST00000575461 PRM2P04554 102 aa4.22□□□□□ -1.73
CALCOCO2-226ENST00000575461 HIST1H2BOP23527 126 aa4.22□□□□□ -1.73
CALCOCO2-226ENST00000575461 G0S2P27469 103 aa4.22□□□□□ -1.73
CALCOCO2-226ENST00000575461 HIST1H2BBP33778 126 aa4.22□□□□□ -1.73
CALCOCO2-226ENST00000575461 HIST1H2BDP58876 126 aa4.22□□□□□ -1.73
CALCOCO2-226ENST00000575461 DEFA1P59665 94 aa4.22□□□□□ -1.73
CALCOCO2-226ENST00000575461 HIST1H2BCP62807 126 aa4.22□□□□□ -1.73
CALCOCO2-226ENST00000575461 HIST2H2BEQ16778 126 aa4.22□□□□□ -1.73
CALCOCO2-226ENST00000575461 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.22□□□□□ -1.73
CALCOCO2-226ENST00000575461 RPL22L1Q6P5R6 122 aaKnown RBP4.22□□□□□ -1.73
CALCOCO2-226ENST00000575461 HIST1H2BHQ93079 126 aa4.22□□□□□ -1.73
CALCOCO2-226ENST00000575461 HIST1H2BNQ99877 126 aa4.22□□□□□ -1.73
CALCOCO2-226ENST00000575461 HIST1H2BMQ99879 126 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms