RNA–Protein interactions for RNA: ENST00000574668.1

TMEM88-202, Transcript of transmembrane protein 88, humanhuman

TSL 2 BASIC

Gene TMEM88, Length 510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88-202ENST00000574668 ZNF580Q9UK33 172 aa13.07□□□□□ -0.32
TMEM88-202ENST00000574668 FBXO24O75426 580 aa13.06□□□□□ -0.32
TMEM88-202ENST00000574668 CDS2O95674 445 aa13.06□□□□□ -0.32
TMEM88-202ENST00000574668 HLA-GP17693 338 aa13.06□□□□□ -0.32
TMEM88-202ENST00000574668 RPL27AP46776 148 aaKnown RBP13.06□□□□□ -0.32
TMEM88-202ENST00000574668 SRPXP78539 464 aa13.06□□□□□ -0.32
TMEM88-202ENST00000574668 TMEM187Q14656 261 aa13.06□□□□□ -0.32
TMEM88-202ENST00000574668 MRGPRG-AS1Q2M3A8 158 aa13.06□□□□□ -0.32
TMEM88-202ENST00000574668 ZNF329Q86UD4 541 aa13.06□□□□□ -0.32
TMEM88-202ENST00000574668 SELENOHQ8IZQ5 122 aaKnown RBP13.06□□□□□ -0.32
TMEM88-202ENST00000574668 CADM3Q8N126 398 aa13.06□□□□□ -0.32
TMEM88-202ENST00000574668 LGI3Q8N145 548 aa13.06□□□□□ -0.32
TMEM88-202ENST00000574668 OR4A16Q8NH70 328 aa13.06□□□□□ -0.32
TMEM88-202ENST00000574668 SRSF12Q8WXF0 261 aaKnown RBP13.06□□□□□ -0.32
TMEM88-202ENST00000574668 RBPMSQ93062 196 aaKnown RBP13.06□□□□□ -0.32
TMEM88-202ENST00000574668 C20orf85Q9H1P6 137 aa13.06□□□□□ -0.32
TMEM88-202ENST00000574668 FBXO7Q9Y3I1 522 aa13.06□□□□□ -0.32
TMEM88-202ENST00000574668 PLXNB1O43157 2135 aa13.06□□□□□ -0.32
TMEM88-202ENST00000574668 TRAV6A0A075B6T7 132 aa13.05□□□□□ -0.32
TMEM88-202ENST00000574668 TRAV3A0A0B4J244 114 aa13.05□□□□□ -0.32
TMEM88-202ENST00000574668 MSGN1A6NI15 193 aa13.05□□□□□ -0.32
TMEM88-202ENST00000574668 G3V318 75 aa13.05□□□□□ -0.32
TMEM88-202ENST00000574668 RBMXL2O75526 392 aaKnown RBP13.05□□□□□ -0.32
TMEM88-202ENST00000574668 SFT2D2O95562 160 aa13.05□□□□□ -0.32
TMEM88-202ENST00000574668 RAB25P57735 213 aa13.05□□□□□ -0.32
TMEM88-202ENST00000574668 SUPT4H1P63272 117 aaKnown RBP13.05□□□□□ -0.32
TMEM88-202ENST00000574668 PPP1R1AQ13522 171 aa13.05□□□□□ -0.32
TMEM88-202ENST00000574668 OXLD1Q5BKU9 147 aa13.05□□□□□ -0.32
TMEM88-202ENST00000574668 TMEM268Q5VZI3 342 aa13.05□□□□□ -0.32
TMEM88-202ENST00000574668 COMMD1Q8N668 190 aa13.05□□□□□ -0.32
TMEM88-202ENST00000574668 LFNGQ8NES3 379 aa13.05□□□□□ -0.32
TMEM88-202ENST00000574668 CASTOR1Q8WTX7 329 aa13.05□□□□□ -0.32
TMEM88-202ENST00000574668 TMEM68Q96MH6 324 aa13.05□□□□□ -0.32
TMEM88-202ENST00000574668 FYTTD1Q96QD9 318 aaKnown RBP13.05□□□□□ -0.32
TMEM88-202ENST00000574668 COMMD5Q9GZQ3 224 aa13.05□□□□□ -0.32
TMEM88-202ENST00000574668 PRNDQ9UKY0 176 aa13.05□□□□□ -0.32
TMEM88-202ENST00000574668 NSG2Q9Y328 171 aa13.05□□□□□ -0.32
TMEM88-202ENST00000574668 NUBP2Q9Y5Y2 271 aa13.05□□□□□ -0.32
TMEM88-202ENST00000574668 DNAH3Q8TD57 4116 aa13.05□□□□□ -0.32
TMEM88-202ENST00000574668 PIGBOS1A0A0B4J2F0 54 aa13.04□□□□□ -0.32
TMEM88-202ENST00000574668 IL6RP08887 468 aaPredicted RBP13.04□□□□□ -0.32
TMEM88-202ENST00000574668 H2AFB2P0C5Z0 115 aa13.04□□□□□ -0.32
TMEM88-202ENST00000574668 OR9G9P0C7N8 305 aa13.04□□□□□ -0.32
TMEM88-202ENST00000574668 CD28P10747 220 aa13.04□□□□□ -0.32
TMEM88-202ENST00000574668 EGR2P11161 476 aaPredicted RBP13.04□□□□□ -0.32
TMEM88-202ENST00000574668 ANXA7P20073 488 aaKnown RBP13.04□□□□□ -0.32
TMEM88-202ENST00000574668 CRIP2P52943 208 aaPredicted RBP13.04□□□□□ -0.32
TMEM88-202ENST00000574668 SSBP2P81877 361 aaPredicted RBP13.04□□□□□ -0.32
TMEM88-202ENST00000574668 C4orf46Q504U0 113 aa13.04□□□□□ -0.32
TMEM88-202ENST00000574668 C10orf55Q5SWW7 151 aa13.04□□□□□ -0.32
TMEM88-202ENST00000574668 TEX38Q6PEX7 206 aa13.04□□□□□ -0.32
TMEM88-202ENST00000574668 C10orf99Q6UWK7 81 aa13.04□□□□□ -0.32
TMEM88-202ENST00000574668 MRAPQ8TCY5 172 aa13.04□□□□□ -0.32
TMEM88-202ENST00000574668 IL22RA2Q969J5 263 aa13.04□□□□□ -0.32
TMEM88-202ENST00000574668 TMEM56Q96MV1 263 aa13.04□□□□□ -0.32
TMEM88-202ENST00000574668 SPIN2AQ99865 258 aa13.04□□□□□ -0.32
TMEM88-202ENST00000574668 SPIN2BQ9BPZ2 258 aa13.04□□□□□ -0.32
TMEM88-202ENST00000574668 FKBP11Q9NYL4 201 aa13.04□□□□□ -0.32
TMEM88-202ENST00000574668 PRR13Q9NZ81 148 aa13.04□□□□□ -0.32
TMEM88-202ENST00000574668 TMEM56-RWDD3S4R434 201 aa13.04□□□□□ -0.32
TMEM88-202ENST00000574668 KMT2CQ8NEZ4 4911 aaKnown RBP13.03□□□□□ -0.32
TMEM88-202ENST00000574668 A0A1W2PN81 502 aa13.03□□□□□ -0.32
TMEM88-202ENST00000574668 IGKV1-5P01602 117 aa13.03□□□□□ -0.32
TMEM88-202ENST00000574668 OR4E1P0C645 316 aa13.03□□□□□ -0.32
TMEM88-202ENST00000574668 CHRNA7P36544 502 aa13.03□□□□□ -0.32
TMEM88-202ENST00000574668 OR2B8PP59922 312 aa13.03□□□□□ -0.32
TMEM88-202ENST00000574668 NSUN5P1Q3KNT7 163 aa13.03□□□□□ -0.32
TMEM88-202ENST00000574668 AKIRIN2Q53H80 203 aa13.03□□□□□ -0.32
TMEM88-202ENST00000574668 CXorf66Q5JRM2 361 aaPredicted RBP13.03□□□□□ -0.32
TMEM88-202ENST00000574668 FAM219AQ8IW50 185 aa13.03□□□□□ -0.32
TMEM88-202ENST00000574668 OR1L8Q8NGR8 309 aa13.03□□□□□ -0.32
TMEM88-202ENST00000574668 LHFPL5Q8TAF8 219 aa13.03□□□□□ -0.32
TMEM88-202ENST00000574668 WIPF2Q8TF74 440 aaPredicted RBP13.03□□□□□ -0.32
TMEM88-202ENST00000574668 NUDT15Q9NV35 164 aa13.03□□□□□ -0.32
TMEM88-202ENST00000574668 FOXA2Q9Y261 457 aaPredicted RBP13.03□□□□□ -0.32
TMEM88-202ENST00000574668 OR51B2Q9Y5P1 312 aa13.03□□□□□ -0.32
TMEM88-202ENST00000574668 TNCP24821 2201 aa13.03□□□□□ -0.32
TMEM88-202ENST00000574668 TCRBV4S1A1TA0A5B7 111 aa13.02□□□□□ -0.33
TMEM88-202ENST00000574668 C9orf170A2RU37 121 aa13.02□□□□□ -0.33
TMEM88-202ENST00000574668 HLA-AP01891 365 aaKnown RBP13.02□□□□□ -0.33
TMEM88-202ENST00000574668 ELANEP08246 267 aa13.02□□□□□ -0.33
TMEM88-202ENST00000574668 FGF2P09038 288 aa13.02□□□□□ -0.33
TMEM88-202ENST00000574668 APELAP0DMC3 54 aa13.02□□□□□ -0.33
TMEM88-202ENST00000574668 MYOD1P15172 320 aa13.02□□□□□ -0.33
TMEM88-202ENST00000574668 KHDC1LQ5JSQ8 128 aa13.02□□□□□ -0.33
TMEM88-202ENST00000574668 TMEM65Q6PI78 240 aa13.02□□□□□ -0.33
TMEM88-202ENST00000574668 LYG2Q86SG7 212 aa13.02□□□□□ -0.33
TMEM88-202ENST00000574668 OR5T1Q8NG75 326 aa13.02□□□□□ -0.33
TMEM88-202ENST00000574668 HINT2Q9BX68 163 aa13.02□□□□□ -0.33
TMEM88-202ENST00000574668 ZNF355PQ9NSJ1 428 aa13.02□□□□□ -0.33
TMEM88-202ENST00000574668 A0A0B4J2A0 478 aa13.01□□□□□ -0.33
TMEM88-202ENST00000574668 HMX3A6NHT5 357 aa13.01□□□□□ -0.33
TMEM88-202ENST00000574668 C15orf61A6NNL5 157 aa13.01□□□□□ -0.33
TMEM88-202ENST00000574668 IGHG4P01861 327 aa13.01□□□□□ -0.33
TMEM88-202ENST00000574668 TRAPPC2P0DI81 140 aa13.01□□□□□ -0.33
TMEM88-202ENST00000574668 TRAPPC2BP0DI82 140 aa13.01□□□□□ -0.33
TMEM88-202ENST00000574668 PF4V1P10720 104 aa13.01□□□□□ -0.33
TMEM88-202ENST00000574668 PPIFP30405 207 aaKnown RBP13.01□□□□□ -0.33
TMEM88-202ENST00000574668 CFHR3Q02985 330 aa13.01□□□□□ -0.33
TMEM88-202ENST00000574668 FOXE3Q13461 319 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms