RNA–Protein interactions for RNA: ENST00000573710.7

CACNA1A-202, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-202ENST00000573710 PMCHL2Q9BQD1 86 aa13.63□□□□□ -0.23
CACNA1A-202ENST00000573710 SDF2L1Q9HCN8 221 aa13.63□□□□□ -0.23
CACNA1A-202ENST00000573710 C19orf67A6NJJ6 358 aa13.63□□□□□ -0.23
CACNA1A-202ENST00000573710 HPRT1P00492 218 aa13.63□□□□□ -0.23
CACNA1A-202ENST00000573710 ZNF645Q8N7E2 425 aa13.63□□□□□ -0.23
CACNA1A-202ENST00000573710 DDA1Q9BW61 102 aa13.63□□□□□ -0.23
CACNA1A-202ENST00000573710 MS4A6AQ9H2W1 248 aa13.63□□□□□ -0.23
CACNA1A-202ENST00000573710 GGTLC1Q9BX51 225 aa13.63□□□□□ -0.23
CACNA1A-202ENST00000573710 FOXA2Q9Y261 457 aaPredicted RBP13.63□□□□□ -0.23
CACNA1A-202ENST00000573710 ZPLD1Q8TCW7 415 aa13.62□□□□□ -0.23
CACNA1A-202ENST00000573710 H7C1H1 209 aa13.62□□□□□ -0.23
CACNA1A-202ENST00000573710 MRPL52Q86TS9 123 aaKnown RBP13.62□□□□□ -0.23
CACNA1A-202ENST00000573710 FAM19A2Q8N3H0 131 aa13.62□□□□□ -0.23
CACNA1A-202ENST00000573710 WDFY2Q96P53 400 aa13.62□□□□□ -0.23
CACNA1A-202ENST00000573710 SCTP09683 121 aa13.62□□□□□ -0.23
CACNA1A-202ENST00000573710 RBMY1FQ15415 496 aaKnown RBP13.62□□□□□ -0.23
CACNA1A-202ENST00000573710 IGHV1-69-2A0A0G2JMI3 117 aa13.62□□□□□ -0.23
CACNA1A-202ENST00000573710 CBLN1P23435 193 aa13.62□□□□□ -0.23
CACNA1A-202ENST00000573710 IGKV1D-33P01593 117 aa13.62□□□□□ -0.23
CACNA1A-202ENST00000573710 IGKV1-33P01594 117 aa13.62□□□□□ -0.23
CACNA1A-202ENST00000573710 TMEM86BQ8N661 226 aa13.62□□□□□ -0.23
CACNA1A-202ENST00000573710 BCL2L10Q9HD36 194 aa13.62□□□□□ -0.23
CACNA1A-202ENST00000573710 PAPPA-AS1Q5QFB9 102 aa13.61□□□□□ -0.23
CACNA1A-202ENST00000573710 TMEM186Q96B77 213 aa13.61□□□□□ -0.23
CACNA1A-202ENST00000573710 NEU3Q9UQ49 428 aa13.61□□□□□ -0.23
CACNA1A-202ENST00000573710 J3QT63 122 aa13.61□□□□□ -0.23
CACNA1A-202ENST00000573710 PEF1Q9UBV8 284 aaKnown RBP13.61□□□□□ -0.23
CACNA1A-202ENST00000573710 TRAV25A0A0B4J276 109 aa13.61□□□□□ -0.23
CACNA1A-202ENST00000573710 CXCL3P19876 107 aa13.61□□□□□ -0.23
CACNA1A-202ENST00000573710 DRD3P35462 400 aa13.61□□□□□ -0.23
CACNA1A-202ENST00000573710 C4AP0C0L4 1744 aa13.61□□□□□ -0.23
CACNA1A-202ENST00000573710 RPL36A-HNRNPH2H7BZ11 118 aa13.61□□□□□ -0.23
CACNA1A-202ENST00000573710 SIRT4Q9Y6E7 314 aaPredicted RBP13.61□□□□□ -0.23
CACNA1A-202ENST00000573710 MED13LQ71F56 2210 aa13.61□□□□□ -0.23
CACNA1A-202ENST00000573710 TNFRSF6BO95407 300 aa13.61□□□□□ -0.23
CACNA1A-202ENST00000573710 NHP2Q9NX24 153 aaKnown RBP13.61□□□□□ -0.23
CACNA1A-202ENST00000573710 COX19Q49B96 90 aa13.61□□□□□ -0.23
CACNA1A-202ENST00000573710 IDI2-AS1Q9NZ38 188 aa13.61□□□□□ -0.23
CACNA1A-202ENST00000573710 TBX21Q9UL17 535 aa13.61□□□□□ -0.23
CACNA1A-202ENST00000573710 LIPT2A6NK58 231 aa13.6□□□□□ -0.23
CACNA1A-202ENST00000573710 ITGB1BP1O14713 200 aa13.6□□□□□ -0.23
CACNA1A-202ENST00000573710 NIT1Q86X76 327 aa13.6□□□□□ -0.23
CACNA1A-202ENST00000573710 ZNF385AQ96PM9 386 aaKnown RBP13.6□□□□□ -0.23
CACNA1A-202ENST00000573710 NRIP2Q9BQI9 281 aa13.6□□□□□ -0.23
CACNA1A-202ENST00000573710 GPR132Q9UNW8 380 aa13.6□□□□□ -0.23
CACNA1A-202ENST00000573710 FOXH1O75593 365 aa13.6□□□□□ -0.23
CACNA1A-202ENST00000573710 OR2H2O95918 312 aa13.6□□□□□ -0.23
CACNA1A-202ENST00000573710 FHITP49789 147 aa13.6□□□□□ -0.23
CACNA1A-202ENST00000573710 A0A087WX48 190 aa13.6□□□□□ -0.23
CACNA1A-202ENST00000573710 NDUFS8O00217 210 aa13.6□□□□□ -0.23
CACNA1A-202ENST00000573710 SMIM18P0DKX4 95 aa13.6□□□□□ -0.23
CACNA1A-202ENST00000573710 SDHCQ99643 169 aaPredicted RBP13.6□□□□□ -0.23
CACNA1A-202ENST00000573710 FBXL15Q9H469 300 aa13.6□□□□□ -0.23
CACNA1A-202ENST00000573710 H3BMM0 161 aa13.6□□□□□ -0.23
CACNA1A-202ENST00000573710 CD28P10747 220 aa13.6□□□□□ -0.23
CACNA1A-202ENST00000573710 CEACAM8P31997 349 aaPredicted RBP13.6□□□□□ -0.23
CACNA1A-202ENST00000573710 UBE2WQ96B02 151 aa13.6□□□□□ -0.23
CACNA1A-202ENST00000573710 IGKV1D-42A0A075B6H8 117 aa13.6□□□□□ -0.23
CACNA1A-202ENST00000573710 PLPP2O43688 288 aa13.6□□□□□ -0.23
CACNA1A-202ENST00000573710 CD5LO43866 347 aa13.6□□□□□ -0.23
CACNA1A-202ENST00000573710 IL11P20809 199 aa13.6□□□□□ -0.23
CACNA1A-202ENST00000573710 C8orf46Q8TAG6 207 aa13.6□□□□□ -0.23
CACNA1A-202ENST00000573710 TMEM126AQ9H061 195 aa13.6□□□□□ -0.23
CACNA1A-202ENST00000573710 hADV29S1A0JD25 119 aa13.59□□□□□ -0.23
CACNA1A-202ENST00000573710 NPIPB11E5RHQ5 1161 aa13.59□□□□□ -0.23
CACNA1A-202ENST00000573710 IGLV3-27P01718 113 aa13.59□□□□□ -0.23
CACNA1A-202ENST00000573710 TCRAP04437 139 aa13.59□□□□□ -0.23
CACNA1A-202ENST00000573710 LIPFP07098 398 aa13.59□□□□□ -0.23
CACNA1A-202ENST00000573710 A0A1W2PP11 408 aa13.59□□□□□ -0.23
CACNA1A-202ENST00000573710 UPK3AO75631 287 aa13.59□□□□□ -0.23
CACNA1A-202ENST00000573710 RPS20P60866 119 aaKnown RBP13.59□□□□□ -0.23
CACNA1A-202ENST00000573710 TPTE2P1Q5T6R2 138 aa13.59□□□□□ -0.23
CACNA1A-202ENST00000573710 LINC01555Q8NAE3 123 aa13.59□□□□□ -0.23
CACNA1A-202ENST00000573710 TRAV12-1A0A0B4J245 112 aa13.59□□□□□ -0.23
CACNA1A-202ENST00000573710 MPV17P39210 176 aa13.59□□□□□ -0.23
CACNA1A-202ENST00000573710 PDFQ9HBH1 243 aa13.59□□□□□ -0.23
CACNA1A-202ENST00000573710 COLQQ9Y215 455 aaPredicted RBP13.59□□□□□ -0.23
CACNA1A-202ENST00000573710 C1QL1O75973 258 aa13.59□□□□□ -0.23
CACNA1A-202ENST00000573710 CLDND2Q8NHS1 167 aa13.59□□□□□ -0.23
CACNA1A-202ENST00000573710 CD24P25063 80 aa13.59□□□□□ -0.23
CACNA1A-202ENST00000573710 COLCA1Q6ZS62 124 aa13.59□□□□□ -0.23
CACNA1A-202ENST00000573710 ASAH2BP0C7U1 165 aa13.58□□□□□ -0.23
CACNA1A-202ENST00000573710 SVIPQ8NHG7 77 aa13.58□□□□□ -0.23
CACNA1A-202ENST00000573710 M0R2P5 195 aa13.58□□□□□ -0.23
CACNA1A-202ENST00000573710 MRM2Q9UI43 246 aaKnown RBP13.58□□□□□ -0.23
CACNA1A-202ENST00000573710 SAP30O75446 220 aa13.58□□□□□ -0.24
CACNA1A-202ENST00000573710 OR51G1Q8NGK1 321 aa13.58□□□□□ -0.24
CACNA1A-202ENST00000573710 PEMTQ9UBM1 199 aa13.58□□□□□ -0.24
CACNA1A-202ENST00000573710 H3BUT2 72 aa13.58□□□□□ -0.24
CACNA1A-202ENST00000573710 DTX2Q86UW9 622 aa13.58□□□□□ -0.24
CACNA1A-202ENST00000573710 BAALCQ8WXS3 180 aa13.58□□□□□ -0.24
CACNA1A-202ENST00000573710 COQ2Q96H96 371 aa13.58□□□□□ -0.24
CACNA1A-202ENST00000573710 SH3BGRL3Q9H299 93 aa13.58□□□□□ -0.24
CACNA1A-202ENST00000573710 MMD2Q8IY49 270 aa13.58□□□□□ -0.24
CACNA1A-202ENST00000573710 UNC119Q13432 240 aa13.57□□□□□ -0.24
CACNA1A-202ENST00000573710 FREM1Q5H8C1 2179 aa13.57□□□□□ -0.24
CACNA1A-202ENST00000573710 DSPPQ9NZW4 1301 aa13.57□□□□□ -0.24
CACNA1A-202ENST00000573710 DPRXA6NFQ7 191 aa13.57□□□□□ -0.24
CACNA1A-202ENST00000573710 GHRHP01286 108 aa13.57□□□□□ -0.24
CACNA1A-202ENST00000573710 SCN4AP35499 1836 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms