RNA–Protein interactions for RNA: ENST00000573550.5

CDC27-215, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-215ENST00000573550 ABHD3Q8WU67 409 aa3.86□□□□□ -1.79
CDC27-215ENST00000573550 PSMF1Q92530 271 aa3.86□□□□□ -1.79
CDC27-215ENST00000573550 APH1AQ96BI3 265 aa3.86□□□□□ -1.79
CDC27-215ENST00000573550 RAB39BQ96DA2 213 aa3.86□□□□□ -1.79
CDC27-215ENST00000573550 BSCL2Q96G97 398 aaPredicted RBP3.86□□□□□ -1.79
CDC27-215ENST00000573550 CYYR1Q96J86 154 aa3.86□□□□□ -1.79
CDC27-215ENST00000573550 JSRP1Q96MG2 331 aaPredicted RBP3.86□□□□□ -1.79
CDC27-215ENST00000573550 PYGO2Q9BRQ0 406 aa3.86□□□□□ -1.79
CDC27-215ENST00000573550 RTL8AQ9BWD3 113 aa3.86□□□□□ -1.79
CDC27-215ENST00000573550 MRPL37Q9BZE1 423 aaKnown RBP3.86□□□□□ -1.79
CDC27-215ENST00000573550 FGF23Q9GZV9 251 aaPredicted RBP3.86□□□□□ -1.79
CDC27-215ENST00000573550 AKIRIN1Q9H9L7 192 aaPredicted RBP3.86□□□□□ -1.79
CDC27-215ENST00000573550 CALHM2Q9HA72 323 aa3.86□□□□□ -1.79
CDC27-215ENST00000573550 TMEM9BQ9NQ34 198 aa3.86□□□□□ -1.79
CDC27-215ENST00000573550 MANBALQ9NQG1 85 aa3.86□□□□□ -1.79
CDC27-215ENST00000573550 GSN-AS1Q9NRJ2 163 aa3.86□□□□□ -1.79
CDC27-215ENST00000573550 MTCH1Q9NZJ7 389 aa3.86□□□□□ -1.79
CDC27-215ENST00000573550 ZNF581Q9P0T4 197 aa3.86□□□□□ -1.79
CDC27-215ENST00000573550 ZMAT5Q9UDW3 170 aaKnown RBP3.86□□□□□ -1.79
CDC27-215ENST00000573550 VAX2Q9UIW0 290 aa3.86□□□□□ -1.79
CDC27-215ENST00000573550 R4GN57 208 aa3.86□□□□□ -1.79
CDC27-215ENST00000573550 ARID1AO14497 2285 aa3.86□□□□□ -1.79
CDC27-215ENST00000573550 ARHGAP21Q5T5U3 1957 aa3.85□□□□□ -1.79
CDC27-215ENST00000573550 MED12Q93074 2177 aa3.85□□□□□ -1.79
CDC27-215ENST00000573550 TRAV24A0A0B4J272 114 aa3.85□□□□□ -1.79
CDC27-215ENST00000573550 PCP4L1A6NKN8 68 aa3.85□□□□□ -1.79
CDC27-215ENST00000573550 ZNF729A6NN14 1252 aaPredicted RBP3.85□□□□□ -1.79
CDC27-215ENST00000573550 SNURFLB1AK76 121 aa3.85□□□□□ -1.79
CDC27-215ENST00000573550 H0YL77 283 aa3.85□□□□□ -1.79
CDC27-215ENST00000573550 CLDN34H7C241 214 aa3.85□□□□□ -1.79
CDC27-215ENST00000573550 PPP1R2P9O14990 202 aa3.85□□□□□ -1.79
CDC27-215ENST00000573550 CHST1O43916 411 aa3.85□□□□□ -1.79
CDC27-215ENST00000573550 CLN5O75503 358 aa3.85□□□□□ -1.79
CDC27-215ENST00000573550 VENTXO95231 258 aa3.85□□□□□ -1.79
CDC27-215ENST00000573550 IFNA10P01566 189 aa3.85□□□□□ -1.79
CDC27-215ENST00000573550 SCTP09683 121 aa3.85□□□□□ -1.79
CDC27-215ENST00000573550 P0C879 139 aa3.85□□□□□ -1.79
CDC27-215ENST00000573550 CCL4P13236 92 aa3.85□□□□□ -1.79
CDC27-215ENST00000573550 CD99P14209 185 aa3.85□□□□□ -1.79
CDC27-215ENST00000573550 SELEP16581 610 aa3.85□□□□□ -1.79
CDC27-215ENST00000573550 S100A2P29034 98 aa3.85□□□□□ -1.79
CDC27-215ENST00000573550 NOVA1P51513 510 aaKnown RBP3.85□□□□□ -1.79
CDC27-215ENST00000573550 GPM6AP51674 278 aa3.85□□□□□ -1.79
CDC27-215ENST00000573550 DLK1P80370 383 aa3.85□□□□□ -1.79
CDC27-215ENST00000573550 ATP6V1FQ16864 119 aa3.85□□□□□ -1.79
CDC27-215ENST00000573550 LRRC75BQ2VPJ9 315 aa3.85□□□□□ -1.79
CDC27-215ENST00000573550 OR4A47Q6IF82 309 aa3.85□□□□□ -1.79
CDC27-215ENST00000573550 TRAT1Q6PIZ9 186 aa3.85□□□□□ -1.79
CDC27-215ENST00000573550 TMEM14EPQ6UXP3 125 aa3.85□□□□□ -1.79
CDC27-215ENST00000573550 YRDCQ86U90 279 aaKnown RBP3.85□□□□□ -1.79
CDC27-215ENST00000573550 ZNF429Q86V71 674 aa3.85□□□□□ -1.79
CDC27-215ENST00000573550 C1orf174Q8IYL3 243 aa3.85□□□□□ -1.79
CDC27-215ENST00000573550 ZFP82Q8N141 532 aa3.85□□□□□ -1.79
CDC27-215ENST00000573550 FAM58AQ8N1B3 248 aa3.85□□□□□ -1.79
CDC27-215ENST00000573550 ZNF525Q8N782 197 aa3.85□□□□□ -1.79
CDC27-215ENST00000573550 CYB561D1Q8N8Q1 229 aa3.85□□□□□ -1.79
CDC27-215ENST00000573550 ZFP62Q8NB50 900 aaPredicted RBP3.85□□□□□ -1.79
CDC27-215ENST00000573550 SCGB1C1Q8TD33 95 aa3.85□□□□□ -1.79
CDC27-215ENST00000573550 NEK7Q8TDX7 302 aa3.85□□□□□ -1.79
CDC27-215ENST00000573550 Q8WTZ3 238 aa3.85□□□□□ -1.79
CDC27-215ENST00000573550 CT55Q8WUE5 264 aa3.85□□□□□ -1.79
CDC27-215ENST00000573550 ISOC2Q96AB3 205 aa3.85□□□□□ -1.79
CDC27-215ENST00000573550 CIB3Q96Q77 187 aaPredicted RBP3.85□□□□□ -1.79
CDC27-215ENST00000573550 TXNDC17Q9BRA2 123 aa3.85□□□□□ -1.79
CDC27-215ENST00000573550 MAGT1Q9H0U3 335 aa3.85□□□□□ -1.79
CDC27-215ENST00000573550 OR51I2Q9H344 312 aa3.85□□□□□ -1.79
CDC27-215ENST00000573550 HES4Q9HCC6 221 aa3.85□□□□□ -1.79
CDC27-215ENST00000573550 DNAJC4Q9NNZ3 241 aa3.85□□□□□ -1.79
CDC27-215ENST00000573550 DEPPQ9NTK1 212 aa3.85□□□□□ -1.79
CDC27-215ENST00000573550 KLF13Q9Y2Y9 288 aaPredicted RBP3.85□□□□□ -1.79
CDC27-215ENST00000573550 WIPI2Q9Y4P8 454 aa3.85□□□□□ -1.79
CDC27-215ENST00000573550 LIPGQ9Y5X9 500 aa3.85□□□□□ -1.79
CDC27-215ENST00000573550 PUS1Q9Y606 427 aaKnown RBP eCLIP3.85□□□□□ -1.79
CDC27-215ENST00000573550 SPTBN5Q9NRC6 3674 aaKnown RBP3.84□□□□□ -1.79
CDC27-215ENST00000573550 A0A1B0GVY2 172 aa3.84□□□□□ -1.79
CDC27-215ENST00000573550 A0A1B0GWJ7 208 aa3.84□□□□□ -1.79
CDC27-215ENST00000573550 A0A1W2PPE3 182 aa3.84□□□□□ -1.79
CDC27-215ENST00000573550 SMCO3A2RU48 225 aa3.84□□□□□ -1.79
CDC27-215ENST00000573550 C5orf49A4QMS7 147 aa3.84□□□□□ -1.79
CDC27-215ENST00000573550 EPM2AB3EWF7 344 aa3.84□□□□□ -1.79
CDC27-215ENST00000573550 SOCS3O14543 225 aa3.84□□□□□ -1.79
CDC27-215ENST00000573550 PHOX2AO14813 284 aa3.84□□□□□ -1.79
CDC27-215ENST00000573550 MPDU1O75352 247 aa3.84□□□□□ -1.79
CDC27-215ENST00000573550 TRAPPC6AO75865 159 aa3.84□□□□□ -1.79
CDC27-215ENST00000573550 CST7O76096 145 aa3.84□□□□□ -1.79
CDC27-215ENST00000573550 KBTBD11O94819 623 aa3.84□□□□□ -1.79
CDC27-215ENST00000573550 PTBP3O95758 552 aaKnown RBP3.84□□□□□ -1.79
CDC27-215ENST00000573550 TYMSP04818 313 aa3.84□□□□□ -1.79
CDC27-215ENST00000573550 PGA5P0DJD9 388 aa3.84□□□□□ -1.79
CDC27-215ENST00000573550 OR13C7P0DN81 318 aa3.84□□□□□ -1.79
CDC27-215ENST00000573550 NQO2P16083 231 aa3.84□□□□□ -1.79
CDC27-215ENST00000573550 HIST1H1BP16401 226 aaKnown RBP3.84□□□□□ -1.79
CDC27-215ENST00000573550 MDKP21741 143 aaPredicted RBP3.84□□□□□ -1.79
CDC27-215ENST00000573550 DSCR10P59022 87 aa3.84□□□□□ -1.79
CDC27-215ENST00000573550 OR2B8PP59922 312 aa3.84□□□□□ -1.79
CDC27-215ENST00000573550 LCN2P80188 198 aa3.84□□□□□ -1.79
CDC27-215ENST00000573550 MEF2BQ02080 365 aaPredicted RBP3.84□□□□□ -1.79
CDC27-215ENST00000573550 TNFRSF9Q07011 255 aa3.84□□□□□ -1.79
CDC27-215ENST00000573550 ZNF154Q13106 437 aa3.84□□□□□ -1.79
CDC27-215ENST00000573550 CATR1Q13166 79 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms