RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 UCP1P25874 307 aa8.34□□□□□ -1.07
SMG6-213ENST00000573166 C21orf62-AS1Q17RA5 79 aa8.34□□□□□ -1.07
SMG6-213ENST00000573166 CENPVQ7Z7K6 275 aaPredicted RBP8.34□□□□□ -1.07
SMG6-213ENST00000573166 OR10C1Q96KK4 312 aa8.34□□□□□ -1.07
SMG6-213ENST00000573166 CBY1Q9Y3M2 126 aa8.34□□□□□ -1.07
SMG6-213ENST00000573166 SULT1A1P50225 295 aa8.34□□□□□ -1.07
SMG6-213ENST00000573166 LYZP61626 148 aa8.34□□□□□ -1.07
SMG6-213ENST00000573166 GALNT14Q96FL9 552 aa8.34□□□□□ -1.07
SMG6-213ENST00000573166 MS4A10Q96PG2 267 aa8.34□□□□□ -1.07
SMG6-213ENST00000573166 KMT2EQ8IZD2 1858 aa8.34□□□□□ -1.07
SMG6-213ENST00000573166 JMJD1CQ15652 2540 aa8.34□□□□□ -1.07
SMG6-213ENST00000573166 M0R1W7 72 aa8.34□□□□□ -1.07
SMG6-213ENST00000573166 OR2C1O95371 312 aa8.34□□□□□ -1.07
SMG6-213ENST00000573166 REG1AP05451 166 aa8.34□□□□□ -1.07
SMG6-213ENST00000573166 LMO1P25800 156 aa8.34□□□□□ -1.07
SMG6-213ENST00000573166 PSMB3P49720 205 aa8.34□□□□□ -1.07
SMG6-213ENST00000573166 RND3P61587 244 aa8.34□□□□□ -1.07
SMG6-213ENST00000573166 FFAR4Q5NUL3 377 aa8.34□□□□□ -1.07
SMG6-213ENST00000573166 RTBDNQ9BSG5 229 aaPredicted RBP8.34□□□□□ -1.07
SMG6-213ENST00000573166 ZNF737O75373 536 aa8.34□□□□□ -1.08
SMG6-213ENST00000573166 CLEC3BP05452 202 aa8.34□□□□□ -1.08
SMG6-213ENST00000573166 KRTAP27-1Q3LI81 207 aa8.34□□□□□ -1.08
SMG6-213ENST00000573166 SSMEM1Q8WWF3 244 aa8.34□□□□□ -1.08
SMG6-213ENST00000573166 LSM10Q969L4 123 aaKnown RBP8.34□□□□□ -1.08
SMG6-213ENST00000573166 CABLES2Q9BTV7 478 aa8.34□□□□□ -1.08
SMG6-213ENST00000573166 WSB1Q9Y6I7 421 aa8.34□□□□□ -1.08
SMG6-213ENST00000573166 ZNF785A8K8V0 405 aa8.33□□□□□ -1.08
SMG6-213ENST00000573166 KIAA1324LA8MWY0 1029 aaPredicted RBP8.33□□□□□ -1.08
SMG6-213ENST00000573166 EWSR1Q01844 656 aaKnown RBP eCLIP8.33□□□□□ -1.08
SMG6-213ENST00000573166 TNFRSF9Q07011 255 aa8.33□□□□□ -1.08
SMG6-213ENST00000573166 TMEM41BQ5BJD5 291 aa8.33□□□□□ -1.08
SMG6-213ENST00000573166 BTNL8Q6UX41 500 aa8.33□□□□□ -1.08
SMG6-213ENST00000573166 RBKSQ9H477 322 aa8.33□□□□□ -1.08
SMG6-213ENST00000573166 SLC25A22Q9H936 323 aa8.33□□□□□ -1.08
SMG6-213ENST00000573166 SERTAD4Q9NUC0 356 aa8.33□□□□□ -1.08
SMG6-213ENST00000573166 MBPP02686 304 aaPredicted RBP8.33□□□□□ -1.08
SMG6-213ENST00000573166 PRTN3P24158 256 aa8.33□□□□□ -1.08
SMG6-213ENST00000573166 BMI1P35226 326 aa8.33□□□□□ -1.08
SMG6-213ENST00000573166 CSN1S1P47710 185 aa8.33□□□□□ -1.08
SMG6-213ENST00000573166 MSMPQ1L6U9 139 aa8.33□□□□□ -1.08
SMG6-213ENST00000573166 TEX36Q5VZQ5 186 aa8.33□□□□□ -1.08
SMG6-213ENST00000573166 RPL7L1Q6DKI1 246 aaKnown RBP8.33□□□□□ -1.08
SMG6-213ENST00000573166 OR4A47Q6IF82 309 aa8.33□□□□□ -1.08
SMG6-213ENST00000573166 SLC35E3Q7Z769 313 aa8.33□□□□□ -1.08
SMG6-213ENST00000573166 RNF166Q96A37 237 aaPredicted RBP8.33□□□□□ -1.08
SMG6-213ENST00000573166 P2RX4Q99571 388 aa8.33□□□□□ -1.08
SMG6-213ENST00000573166 IFT22Q9H7X7 185 aa8.33□□□□□ -1.08
SMG6-213ENST00000573166 NPIPB11E5RHQ5 1161 aa8.33□□□□□ -1.08
SMG6-213ENST00000573166 CD8AP01732 235 aa8.33□□□□□ -1.08
SMG6-213ENST00000573166 WNT2P09544 360 aa8.33□□□□□ -1.08
SMG6-213ENST00000573166 DUTP33316 252 aaKnown RBP8.33□□□□□ -1.08
SMG6-213ENST00000573166 ADIRFQ15847 76 aa8.33□□□□□ -1.08
SMG6-213ENST00000573166 SRSF7Q16629 238 aaKnown RBP eCLIP8.33□□□□□ -1.08
SMG6-213ENST00000573166 HLA-DRB5Q30154 266 aa8.33□□□□□ -1.08
SMG6-213ENST00000573166 RNF212Q495C1 297 aa8.33□□□□□ -1.08
SMG6-213ENST00000573166 SPRNQ5BIV9 151 aa8.33□□□□□ -1.08
SMG6-213ENST00000573166 Q8WTZ3 238 aa8.33□□□□□ -1.08
SMG6-213ENST00000573166 GNG13Q9P2W3 67 aa8.33□□□□□ -1.08
SMG6-213ENST00000573166 TRBV6-6A0A0A6YYG2 114 aa8.32□□□□□ -1.08
SMG6-213ENST00000573166 HLA-GP17693 338 aa8.32□□□□□ -1.08
SMG6-213ENST00000573166 HSD17B13Q7Z5P4 300 aaPredicted RBP8.32□□□□□ -1.08
SMG6-213ENST00000573166 OR1L6Q8NGR2 347 aa8.32□□□□□ -1.08
SMG6-213ENST00000573166 PHYHIPLQ96FC7 376 aa8.32□□□□□ -1.08
SMG6-213ENST00000573166 REG4Q9BYZ8 158 aa8.32□□□□□ -1.08
SMG6-213ENST00000573166 LOXP28300 417 aaPredicted RBP8.32□□□□□ -1.08
SMG6-213ENST00000573166 DEFB113Q30KQ7 82 aa8.32□□□□□ -1.08
SMG6-213ENST00000573166 C11orf53Q8IXP5 236 aa8.32□□□□□ -1.08
SMG6-213ENST00000573166 TMEM252Q8N6L7 170 aa8.32□□□□□ -1.08
SMG6-213ENST00000573166 RNF24Q9Y225 148 aa8.32□□□□□ -1.08
SMG6-213ENST00000573166 FAM90A26D6RGX4 464 aa8.32□□□□□ -1.08
SMG6-213ENST00000573166 G3V3Q6 166 aa8.32□□□□□ -1.08
SMG6-213ENST00000573166 K7EQM0 130 aa8.32□□□□□ -1.08
SMG6-213ENST00000573166 NBR2O15453 112 aa8.32□□□□□ -1.08
SMG6-213ENST00000573166 SOX15O60248 233 aa8.32□□□□□ -1.08
SMG6-213ENST00000573166 SCGB1D1O95968 90 aa8.32□□□□□ -1.08
SMG6-213ENST00000573166 IGHV4-39P01824 125 aa8.32□□□□□ -1.08
SMG6-213ENST00000573166 ZNF735P0CB33 412 aa8.32□□□□□ -1.08
SMG6-213ENST00000573166 DAZAP1Q96EP5 407 aaKnown RBP8.32□□□□□ -1.08
SMG6-213ENST00000573166 GRAMD2BQ96HH9 432 aa8.32□□□□□ -1.08
SMG6-213ENST00000573166 DUX5Q96PT3 197 aa8.32□□□□□ -1.08
SMG6-213ENST00000573166 BEX4Q9NWD9 120 aaPredicted RBP8.32□□□□□ -1.08
SMG6-213ENST00000573166 PPP5D1E7EU14 171 aa8.31□□□□□ -1.08
SMG6-213ENST00000573166 CORTO00230 105 aa8.31□□□□□ -1.08
SMG6-213ENST00000573166 NPFFO15130 113 aa8.31□□□□□ -1.08
SMG6-213ENST00000573166 CFPP27918 469 aa8.31□□□□□ -1.08
SMG6-213ENST00000573166 NHLH2Q02577 135 aa8.31□□□□□ -1.08
SMG6-213ENST00000573166 PUSL1Q8N0Z8 303 aaKnown RBP8.31□□□□□ -1.08
SMG6-213ENST00000573166 OR1B1Q8NGR6 318 aa8.31□□□□□ -1.08
SMG6-213ENST00000573166 OR5B3Q8NH48 314 aa8.31□□□□□ -1.08
SMG6-213ENST00000573166 OR5R1Q8NH85 324 aa8.31□□□□□ -1.08
SMG6-213ENST00000573166 ISOC2Q96AB3 205 aa8.31□□□□□ -1.08
SMG6-213ENST00000573166 ATP5SQ99766 215 aa8.31□□□□□ -1.08
SMG6-213ENST00000573166 SLC25A33Q9BSK2 321 aa8.31□□□□□ -1.08
SMG6-213ENST00000573166 NPFFR1Q9GZQ6 430 aa8.31□□□□□ -1.08
SMG6-213ENST00000573166 FGF23Q9GZV9 251 aaPredicted RBP8.31□□□□□ -1.08
SMG6-213ENST00000573166 IGKV3-7A0A075B6H7 116 aa8.31□□□□□ -1.08
SMG6-213ENST00000573166 H7BYZ3 331 aa8.31□□□□□ -1.08
SMG6-213ENST00000573166 CTRB1P17538 263 aa8.31□□□□□ -1.08
SMG6-213ENST00000573166 PTPRBP23467 1997 aa8.31□□□□□ -1.08
SMG6-213ENST00000573166 PRRC2AP48634 2157 aaKnown RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms