RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 BMPR1BO00238 502 aa13.18□□□□□ -0.3
SMG6-212ENST00000573153 GPR31O00270 319 aa13.18□□□□□ -0.3
SMG6-212ENST00000573153 UPK2O00526 184 aa13.18□□□□□ -0.3
SMG6-212ENST00000573153 S1PR2O95136 353 aa13.18□□□□□ -0.3
SMG6-212ENST00000573153 NHLRC4P0CG21 123 aaPredicted RBP13.18□□□□□ -0.3
SMG6-212ENST00000573153 CTRB1P17538 263 aa13.18□□□□□ -0.3
SMG6-212ENST00000573153 F2RP25116 425 aa13.18□□□□□ -0.3
SMG6-212ENST00000573153 MECP2P51608 486 aaKnown RBP13.18□□□□□ -0.3
SMG6-212ENST00000573153 UCP3P55916 312 aa13.18□□□□□ -0.3
SMG6-212ENST00000573153 ATP5G2Q06055 141 aa13.18□□□□□ -0.3
SMG6-212ENST00000573153 CTRB2Q6GPI1 263 aa13.18□□□□□ -0.3
SMG6-212ENST00000573153 LPCAT3Q6P1A2 487 aa13.18□□□□□ -0.3
SMG6-212ENST00000573153 SSX9Q7RTT3 188 aa13.18□□□□□ -0.3
SMG6-212ENST00000573153 SBSPONQ8IVN8 264 aa13.18□□□□□ -0.3
SMG6-212ENST00000573153 CMTM1Q8IZ96 169 aa13.18□□□□□ -0.3
SMG6-212ENST00000573153 FYTTD1Q96QD9 318 aaKnown RBP13.18□□□□□ -0.3
SMG6-212ENST00000573153 OR4C12Q96R67 309 aa13.18□□□□□ -0.3
SMG6-212ENST00000573153 SMAD5-AS1Q9Y6J3 95 aa13.18□□□□□ -0.3
SMG6-212ENST00000573153 RYR2Q92736 4967 aa13.17□□□□□ -0.3
SMG6-212ENST00000573153 TRAV3A0A0B4J244 114 aa13.17□□□□□ -0.3
SMG6-212ENST00000573153 RLN1P04808 185 aa13.17□□□□□ -0.3
SMG6-212ENST00000573153 CSN3P07498 182 aa13.17□□□□□ -0.3
SMG6-212ENST00000573153 PSMB6P28072 239 aa13.17□□□□□ -0.3
SMG6-212ENST00000573153 OR2B8PP59922 312 aa13.17□□□□□ -0.3
SMG6-212ENST00000573153 EXOSC2Q13868 293 aaKnown RBP13.17□□□□□ -0.3
SMG6-212ENST00000573153 OR9G4Q8NGQ1 327 aa13.17□□□□□ -0.3
SMG6-212ENST00000573153 C15orf40Q8WUR7 153 aa13.17□□□□□ -0.3
SMG6-212ENST00000573153 DGCR14Q96DF8 476 aaKnown RBP13.17□□□□□ -0.3
SMG6-212ENST00000573153 WWC2-AS2Q96NR7 200 aa13.17□□□□□ -0.3
SMG6-212ENST00000573153 BCL7BQ9BQE9 202 aa13.17□□□□□ -0.3
SMG6-212ENST00000573153 RSRP1Q9BUV0 290 aa13.17□□□□□ -0.3
SMG6-212ENST00000573153 HRASLSQ9HDD0 168 aa13.17□□□□□ -0.3
SMG6-212ENST00000573153 TMEM140Q9NV12 185 aa13.17□□□□□ -0.3
SMG6-212ENST00000573153 STARD9Q9P2P6 4700 aa13.17□□□□□ -0.3
SMG6-212ENST00000573153 MARCH11A6NNE9 402 aa13.16□□□□□ -0.3
SMG6-212ENST00000573153 FAM25AB3EWG3 89 aa13.16□□□□□ -0.3
SMG6-212ENST00000573153 FAM25CB3EWG5 89 aa13.16□□□□□ -0.3
SMG6-212ENST00000573153 FAM25GB3EWG6 89 aa13.16□□□□□ -0.3
SMG6-212ENST00000573153 LY86O95711 162 aa13.16□□□□□ -0.3
SMG6-212ENST00000573153 AREGP15514 252 aa13.16□□□□□ -0.3
SMG6-212ENST00000573153 HIST1H1BP16401 226 aaKnown RBP13.16□□□□□ -0.3
SMG6-212ENST00000573153 SYNJ2BPP57105 145 aa13.16□□□□□ -0.3
SMG6-212ENST00000573153 C15orf32Q32M92 178 aa13.16□□□□□ -0.3
SMG6-212ENST00000573153 ZNF585BQ52M93 769 aa13.16□□□□□ -0.3
SMG6-212ENST00000573153 THOC7Q6I9Y2 204 aaKnown RBP13.16□□□□□ -0.3
SMG6-212ENST00000573153 U3KQK5 164 aa13.16□□□□□ -0.3
SMG6-212ENST00000573153 IGLC7A0M8Q6 106 aa13.15□□□□□ -0.3
SMG6-212ENST00000573153 DPPA5A6NC42 116 aa13.15□□□□□ -0.3
SMG6-212ENST00000573153 DHFRP00374 187 aa13.15□□□□□ -0.3
SMG6-212ENST00000573153 FRMD6-AS1P0C7T7 363 aa13.15□□□□□ -0.3
SMG6-212ENST00000573153 TBPP20226 339 aa13.15□□□□□ -0.3
SMG6-212ENST00000573153 EDN2P20800 178 aa13.15□□□□□ -0.3
SMG6-212ENST00000573153 TSPAN5P62079 268 aa13.15□□□□□ -0.3
SMG6-212ENST00000573153 TATDN3Q17R31 274 aa13.15□□□□□ -0.3
SMG6-212ENST00000573153 RPEL1Q2QD12 228 aa13.15□□□□□ -0.3
SMG6-212ENST00000573153 RAB2BQ8WUD1 216 aa13.15□□□□□ -0.3
SMG6-212ENST00000573153 CCDC140Q96MF4 163 aa13.15□□□□□ -0.3
SMG6-212ENST00000573153 EXTL2Q9UBQ6 330 aa13.15□□□□□ -0.3
SMG6-212ENST00000573153 MTFP1Q9UDX5 166 aa13.15□□□□□ -0.3
SMG6-212ENST00000573153 SACSQ9NZJ4 4579 aa13.15□□□□□ -0.31
SMG6-212ENST00000573153 IGLV11-55A0A075B6I3 123 aa13.14□□□□□ -0.31
SMG6-212ENST00000573153 OR2J3O76001 311 aa13.14□□□□□ -0.31
SMG6-212ENST00000573153 PTBP1P26599 531 aaKnown RBP eCLIP13.14□□□□□ -0.31
SMG6-212ENST00000573153 TMBIM6P55061 237 aa13.14□□□□□ -0.31
SMG6-212ENST00000573153 SPCS2Q15005 226 aa13.14□□□□□ -0.31
SMG6-212ENST00000573153 HSD17B13Q7Z5P4 300 aaPredicted RBP13.14□□□□□ -0.31
SMG6-212ENST00000573153 LHFPL1Q86WI0 220 aa13.14□□□□□ -0.31
SMG6-212ENST00000573153 SLC38A6Q8IZM9 456 aa13.14□□□□□ -0.31
SMG6-212ENST00000573153 DMBX1Q8NFW5 382 aa13.14□□□□□ -0.31
SMG6-212ENST00000573153 FCAMRQ8WWV6 532 aa13.14□□□□□ -0.31
SMG6-212ENST00000573153 ABHD1Q96SE0 405 aa13.14□□□□□ -0.31
SMG6-212ENST00000573153 QTRT1Q9BXR0 403 aaKnown RBP13.14□□□□□ -0.31
SMG6-212ENST00000573153 COMMD5Q9GZQ3 224 aa13.14□□□□□ -0.31
SMG6-212ENST00000573153 MIXL1Q9H2W2 232 aa13.14□□□□□ -0.31
SMG6-212ENST00000573153 C19orf73Q9NVV2 129 aa13.14□□□□□ -0.31
SMG6-212ENST00000573153 KLK11Q9UBX7 282 aa13.14□□□□□ -0.31
SMG6-212ENST00000573153 FBXL7Q9UJT9 491 aa13.14□□□□□ -0.31
SMG6-212ENST00000573153 NBEAL2Q6ZNJ1 2754 aa13.13□□□□□ -0.31
SMG6-212ENST00000573153 IZUMO1RA6ND01 250 aa13.13□□□□□ -0.31
SMG6-212ENST00000573153 A8MZ25 164 aa13.13□□□□□ -0.31
SMG6-212ENST00000573153 NDUFB8O95169 186 aa13.13□□□□□ -0.31
SMG6-212ENST00000573153 S100GP29377 79 aa13.13□□□□□ -0.31
SMG6-212ENST00000573153 LPAR6P43657 344 aa13.13□□□□□ -0.31
SMG6-212ENST00000573153 ERVK-16P61578 105 aa13.13□□□□□ -0.31
SMG6-212ENST00000573153 ARRDC1Q8N5I2 433 aa13.13□□□□□ -0.31
SMG6-212ENST00000573153 OR52I2Q8NH67 350 aa13.13□□□□□ -0.31
SMG6-212ENST00000573153 ZNF486Q96H40 463 aaPredicted RBP13.13□□□□□ -0.31
SMG6-212ENST00000573153 CCDC59Q9P031 241 aaKnown RBP13.13□□□□□ -0.31
SMG6-212ENST00000573153 CD74P04233 296 aa13.12□□□□□ -0.31
SMG6-212ENST00000573153 RND3P61587 244 aa13.12□□□□□ -0.31
SMG6-212ENST00000573153 MRPS10P82664 201 aaKnown RBP13.12□□□□□ -0.31
SMG6-212ENST00000573153 SSBP1Q04837 148 aaKnown RBP13.12□□□□□ -0.31
SMG6-212ENST00000573153 CLVS1Q8IUQ0 354 aaPredicted RBP13.12□□□□□ -0.31
SMG6-212ENST00000573153 DYNC2LI1Q8TCX1 351 aa13.12□□□□□ -0.31
SMG6-212ENST00000573153 NDUFA4L2Q9NRX3 87 aa13.12□□□□□ -0.31
SMG6-212ENST00000573153 PEMTQ9UBM1 199 aa13.12□□□□□ -0.31
SMG6-212ENST00000573153 TEX50A0A1B0GTY4 177 aa13.11□□□□□ -0.31
SMG6-212ENST00000573153 PPP5D1E7EU14 171 aa13.11□□□□□ -0.31
SMG6-212ENST00000573153 GABARAPH6UMI1 98 aa13.11□□□□□ -0.31
SMG6-212ENST00000573153 M0QYG6 137 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms