RNA–Protein interactions for RNA: ENST00000572845.1

TVP23B-205, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 5

Gene TVP23B, Length 483 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-205ENST00000572845 LINC01587Q99440 93 aa2.39□□□□□ -2.03
TVP23B-205ENST00000572845 RNF126Q9BV68 326 aa2.39□□□□□ -2.03
TVP23B-205ENST00000572845 REG4Q9BYZ8 158 aa2.39□□□□□ -2.03
TVP23B-205ENST00000572845 TMEM133Q9H2Q1 129 aa2.39□□□□□ -2.03
TVP23B-205ENST00000572845 EXOSC3Q9NQT5 275 aaKnown RBP2.39□□□□□ -2.03
TVP23B-205ENST00000572845 SPRR3Q9UBC9 169 aa2.39□□□□□ -2.03
TVP23B-205ENST00000572845 PCTPQ9UKL6 214 aa2.39□□□□□ -2.03
TVP23B-205ENST00000572845 ANAPC10Q9UM13 185 aa2.39□□□□□ -2.03
TVP23B-205ENST00000572845 KCNE3Q9Y6H6 103 aa2.39□□□□□ -2.03
TVP23B-205ENST00000572845 ZNF646O15015 1829 aaPredicted RBP2.39□□□□□ -2.03
TVP23B-205ENST00000572845 ABCA3Q99758 1704 aa2.39□□□□□ -2.03
TVP23B-205ENST00000572845 KMT2EQ8IZD2 1858 aa2.39□□□□□ -2.03
TVP23B-205ENST00000572845 DOCK5Q9H7D0 1870 aa2.39□□□□□ -2.03
TVP23B-205ENST00000572845 A2ML1A8K2U0 1454 aa2.39□□□□□ -2.03
TVP23B-205ENST00000572845 TOP2AP11388 1531 aaKnown RBP2.38□□□□□ -2.03
TVP23B-205ENST00000572845 MAGI3Q5TCQ9 1506 aa2.38□□□□□ -2.03
TVP23B-205ENST00000572845 TRBV19A0A075B6N1 114 aa2.38□□□□□ -2.03
TVP23B-205ENST00000572845 TRAV8-3A0A0A6YYJ7 113 aa2.38□□□□□ -2.03
TVP23B-205ENST00000572845 OR4C45A6NMZ5 311 aa2.38□□□□□ -2.03
TVP23B-205ENST00000572845 FNDC10F2Z333 226 aa2.38□□□□□ -2.03
TVP23B-205ENST00000572845 K7EPK0 472 aa2.38□□□□□ -2.03
TVP23B-205ENST00000572845 FFAR1O14842 300 aa2.38□□□□□ -2.03
TVP23B-205ENST00000572845 MYL12BO14950 172 aa2.38□□□□□ -2.03
TVP23B-205ENST00000572845 OR12D1P0DN82 309 aa2.38□□□□□ -2.03
TVP23B-205ENST00000572845 HLA-EP13747 358 aa2.38□□□□□ -2.03
TVP23B-205ENST00000572845 ZNF14P17017 642 aaPredicted RBP2.38□□□□□ -2.03
TVP23B-205ENST00000572845 FKBP2P26885 142 aaKnown RBP2.38□□□□□ -2.03
TVP23B-205ENST00000572845 TGFBR1P36897 503 aa2.38□□□□□ -2.03
TVP23B-205ENST00000572845 CCR2P41597 374 aa2.38□□□□□ -2.03
TVP23B-205ENST00000572845 DCCP43146 1447 aa2.38□□□□□ -2.03
TVP23B-205ENST00000572845 AKR1C2P52895 323 aa2.38□□□□□ -2.03
TVP23B-205ENST00000572845 FOXA1P55317 472 aa2.38□□□□□ -2.03
TVP23B-205ENST00000572845 GFERP55789 205 aa2.38□□□□□ -2.03
TVP23B-205ENST00000572845 TPPP2P59282 170 aa2.38□□□□□ -2.03
TVP23B-205ENST00000572845 C1QTNF8P60827 252 aa2.38□□□□□ -2.03
TVP23B-205ENST00000572845 PPP1CAP62136 330 aa2.38□□□□□ -2.03
TVP23B-205ENST00000572845 FKBP1AP62942 108 aaKnown RBP2.38□□□□□ -2.03
TVP23B-205ENST00000572845 UBA52P62987 128 aaKnown RBP2.38□□□□□ -2.03
TVP23B-205ENST00000572845 SRPXP78539 464 aa2.38□□□□□ -2.03
TVP23B-205ENST00000572845 HOXC5Q00444 222 aa2.38□□□□□ -2.03
TVP23B-205ENST00000572845 VMA21Q3ZAQ7 101 aa2.38□□□□□ -2.03
TVP23B-205ENST00000572845 PRR30Q53SZ7 412 aaPredicted RBP2.38□□□□□ -2.03
TVP23B-205ENST00000572845 MEIG1Q5JSS6 88 aa2.38□□□□□ -2.03
TVP23B-205ENST00000572845 SPANXN3Q5MJ09 141 aa2.38□□□□□ -2.03
TVP23B-205ENST00000572845 TMEM244Q5VVB8 128 aa2.38□□□□□ -2.03
TVP23B-205ENST00000572845 TMEM236Q5W0B7 351 aa2.38□□□□□ -2.03
TVP23B-205ENST00000572845 TNS2Q63HR2 1409 aa2.38□□□□□ -2.03
TVP23B-205ENST00000572845 ZNF773Q6PK81 442 aa2.38□□□□□ -2.03
TVP23B-205ENST00000572845 CLEC19AQ6UXS0 136 aa2.38□□□□□ -2.03
TVP23B-205ENST00000572845 FOXI2Q6ZQN5 318 aa2.38□□□□□ -2.03
TVP23B-205ENST00000572845 SAXO1Q8IYX7 474 aa2.38□□□□□ -2.03
TVP23B-205ENST00000572845 RAB42Q8N4Z0 105 aa2.38□□□□□ -2.03
TVP23B-205ENST00000572845 NUP35Q8NFH5 326 aa2.38□□□□□ -2.03
TVP23B-205ENST00000572845 OR2M3Q8NG83 312 aa2.38□□□□□ -2.03
TVP23B-205ENST00000572845 OR10D4PQ8NGN7 298 aa2.38□□□□□ -2.03
TVP23B-205ENST00000572845 OR10J6PQ8NGY7 276 aa2.38□□□□□ -2.03
TVP23B-205ENST00000572845 PPTC7Q8NI37 304 aa2.38□□□□□ -2.03
TVP23B-205ENST00000572845 CHCHD10Q8WYQ3 142 aaPredicted RBP2.38□□□□□ -2.03
TVP23B-205ENST00000572845 MAGOHBQ96A72 148 aaKnown RBP2.38□□□□□ -2.03
TVP23B-205ENST00000572845 BORCS8Q96FH0 119 aa2.38□□□□□ -2.03
TVP23B-205ENST00000572845 SLC25A21Q9BQT8 299 aaPredicted RBP2.38□□□□□ -2.03
TVP23B-205ENST00000572845 GINS4Q9BRT9 223 aa2.38□□□□□ -2.03
TVP23B-205ENST00000572845 GGTLC1Q9BX51 225 aa2.38□□□□□ -2.03
TVP23B-205ENST00000572845 SRXN1Q9BYN0 137 aa2.38□□□□□ -2.03
TVP23B-205ENST00000572845 CXorf21Q9HAI6 301 aa2.38□□□□□ -2.03
TVP23B-205ENST00000572845 HEBP1Q9NRV9 189 aa2.38□□□□□ -2.03
TVP23B-205ENST00000572845 TRMT112Q9UI30 125 aaKnown RBP2.38□□□□□ -2.03
TVP23B-205ENST00000572845 RARRES3Q9UL19 164 aa2.38□□□□□ -2.03
TVP23B-205ENST00000572845 VSIG4Q9Y279 399 aa2.38□□□□□ -2.03
TVP23B-205ENST00000572845 SIGLEC7Q9Y286 467 aa2.38□□□□□ -2.03
TVP23B-205ENST00000572845 ZNF443Q9Y2A4 671 aaPredicted RBP2.38□□□□□ -2.03
TVP23B-205ENST00000572845 TRAPPC8Q9Y2L5 1435 aa2.38□□□□□ -2.03
TVP23B-205ENST00000572845 COQ4Q9Y3A0 265 aa2.38□□□□□ -2.03
TVP23B-205ENST00000572845 AMMECR1Q9Y4X0 333 aaPredicted RBP2.38□□□□□ -2.03
TVP23B-205ENST00000572845 V9GY05 133 aa2.38□□□□□ -2.03
TVP23B-205ENST00000572845 UBR2Q8IWV8 1755 aa2.38□□□□□ -2.03
TVP23B-205ENST00000572845 MAGI2Q86UL8 1455 aa2.38□□□□□ -2.03
TVP23B-205ENST00000572845 FYCO1Q9BQS8 1478 aa2.38□□□□□ -2.03
TVP23B-205ENST00000572845 QRICH2Q9H0J4 1663 aa2.37□□□□□ -2.03
TVP23B-205ENST00000572845 ATRXP46100 2492 aa2.37□□□□□ -2.03
TVP23B-205ENST00000572845 CDK5RAP2Q96SN8 1893 aa2.37□□□□□ -2.03
TVP23B-205ENST00000572845 NRKQ7Z2Y5 1582 aa2.37□□□□□ -2.03
TVP23B-205ENST00000572845 SMIM26A0A096LP01 95 aa2.37□□□□□ -2.03
TVP23B-205ENST00000572845 IGHV3OR16-9A0A0B4J2B5 98 aa2.37□□□□□ -2.03
TVP23B-205ENST00000572845 FAM236AA0A1B0GUQ0 79 aa2.37□□□□□ -2.03
TVP23B-205ENST00000572845 FAM236BA0A1B0GV22 79 aa2.37□□□□□ -2.03
TVP23B-205ENST00000572845 A0A1W2PRS3 328 aa2.37□□□□□ -2.03
TVP23B-205ENST00000572845 BBIP1A8MTZ0 92 aa2.37□□□□□ -2.03
TVP23B-205ENST00000572845 J3QRK9 145 aa2.37□□□□□ -2.03
TVP23B-205ENST00000572845 CDC42EP2O14613 210 aa2.37□□□□□ -2.03
TVP23B-205ENST00000572845 EDF1O60869 148 aaKnown RBP2.37□□□□□ -2.03
TVP23B-205ENST00000572845 IGKV3-15P01624 115 aa2.37□□□□□ -2.03
TVP23B-205ENST00000572845 TRBV12-3P01733 135 aa2.37□□□□□ -2.03
TVP23B-205ENST00000572845 APOC3P02656 99 aa2.37□□□□□ -2.03
TVP23B-205ENST00000572845 P0DMU3 169 aa2.37□□□□□ -2.03
TVP23B-205ENST00000572845 FAM231AP0DMU4 169 aa2.37□□□□□ -2.03
TVP23B-205ENST00000572845 FAM231CP0DMU5 169 aa2.37□□□□□ -2.03
TVP23B-205ENST00000572845 PGAM2P15259 253 aa2.37□□□□□ -2.03
TVP23B-205ENST00000572845 PPIBP23284 216 aaKnown RBP2.37□□□□□ -2.03
TVP23B-205ENST00000572845 IL2RGP31785 369 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms